Protein–RNA interactions for Protein: P09630

HOXC6, Homeobox protein Hox-C6, humanhuman

Predictions only

Length 235 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC6P09630 MYO5A-201ENST00000356338 11971 ntAPPRIS ALT1 TSL 1 (best) BASIC5.92□□□□□ -1.46
HOXC6P09630 AL160286.3-201ENST00000569644 3294 ntTSL 2 BASIC5.92□□□□□ -1.46
HOXC6P09630 DPP8-203ENST00000341861 8699 ntAPPRIS P4 TSL 2 BASIC5.92□□□□□ -1.46
HOXC6P09630 AL583808.2-201ENST00000418078 1382 ntTSL 5 BASIC5.92□□□□□ -1.46
HOXC6P09630 AL606516.1-201ENST00000455438 1861 ntTSL 2 BASIC5.92□□□□□ -1.46
HOXC6P09630 VPS41-203ENST00000395969 3181 ntTSL 5 BASIC5.92□□□□□ -1.46
HOXC6P09630 UACA-211ENST00000560441 4723 ntAPPRIS ALT2 TSL 5 BASIC5.91□□□□□ -1.46
HOXC6P09630 GJA9-202ENST00000360786 1901 ntAPPRIS P1 BASIC5.91□□□□□ -1.46
HOXC6P09630 NBPF26-202ENST00000611287 2701 ntTSL 5 BASIC5.91□□□□□ -1.46
HOXC6P09630 NBPF14-211ENST00000621070 2701 ntTSL 5 BASIC5.91□□□□□ -1.46
HOXC6P09630 LMNTD1-201ENST00000282881 1718 ntAPPRIS P3 TSL 2 BASIC5.91□□□□□ -1.46
HOXC6P09630 RYR3-202ENST00000415757 15557 ntAPPRIS ALT2 TSL 2 BASIC5.91□□□□□ -1.46
HOXC6P09630 RGS6-204ENST00000404301 1497 ntAPPRIS ALT1 TSL 1 (best) BASIC5.91□□□□□ -1.46
HOXC6P09630 RGS6-206ENST00000407322 1497 ntAPPRIS ALT1 TSL 1 (best) BASIC5.91□□□□□ -1.46
HOXC6P09630 GSTM2-206ENST00000442650 1478 ntTSL 5 BASIC5.91□□□□□ -1.46
HOXC6P09630 ALG11-202ENST00000521508 2558 ntAPPRIS P1 TSL 1 (best) BASIC5.91□□□□□ -1.46
HOXC6P09630 MBNL2-204ENST00000397601 4487 ntTSL 5 BASIC5.91□□□□□ -1.46
HOXC6P09630 AL355488.2-201ENST00000609909 2850 ntBASIC5.91□□□□□ -1.46
HOXC6P09630 IGF2BP2-AS1-202ENST00000456447 1531 ntTSL 1 (best) BASIC5.91□□□□□ -1.46
HOXC6P09630 ADGRL2-209ENST00000370727 5164 ntTSL 5 BASIC5.91□□□□□ -1.46
HOXC6P09630 CCNB3-202ENST00000348603 1201 ntTSL 1 (best) BASIC5.91□□□□□ -1.46
HOXC6P09630 RNU4-23P-201ENST00000362839 140 ntBASIC5.91□□□□□ -1.46
HOXC6P09630 RNU1-32P-201ENST00000363937 159 ntBASIC5.91□□□□□ -1.46
HOXC6P09630 RNA5SP428-201ENST00000365129 132 ntBASIC5.91□□□□□ -1.46
HOXC6P09630 CCNB3-203ENST00000376038 1201 ntTSL 5 BASIC5.91□□□□□ -1.46
HOXC6P09630 MATR3-230ENST00000394800 5513 ntTSL 5 BASIC5.91□□□□□ -1.46
HOXC6P09630 SNORA81-201ENST00000408493 178 ntBASIC5.91□□□□□ -1.46
HOXC6P09630 RN7SKP114-201ENST00000410327 279 ntBASIC5.91□□□□□ -1.46
HOXC6P09630 OXSM-202ENST00000420173 1256 ntTSL 1 (best) BASIC5.91□□□□□ -1.46
HOXC6P09630 AC002064.2-201ENST00000420245 289 ntTSL 3 BASIC5.91□□□□□ -1.46
HOXC6P09630 BX119904.3-201ENST00000428194 957 ntBASIC5.91□□□□□ -1.46
HOXC6P09630 HSPD1P12-201ENST00000429127 1069 ntBASIC5.91□□□□□ -1.46
HOXC6P09630 AL353689.2-201ENST00000433837 440 ntTSL 3 BASIC5.91□□□□□ -1.46
HOXC6P09630 AL590762.3-201ENST00000436372 640 ntBASIC5.91□□□□□ -1.46
HOXC6P09630 RPS29P10-201ENST00000439197 166 ntBASIC5.91□□□□□ -1.46
HOXC6P09630 AC073465.2-201ENST00000440938 498 ntBASIC5.91□□□□□ -1.46
HOXC6P09630 AC122136.1-201ENST00000443971 478 ntTSL 3 BASIC5.91□□□□□ -1.46
HOXC6P09630 KCNQ5-IT1-201ENST00000445310 563 ntTSL 2 BASIC5.91□□□□□ -1.46
HOXC6P09630 RPL5P22-201ENST00000480199 884 ntBASIC5.91□□□□□ -1.46
HOXC6P09630 AC080013.1-206ENST00000496842 712 ntTSL 2 BASIC5.91□□□□□ -1.46
HOXC6P09630 LINC02217-201ENST00000505844 687 ntTSL 2 BASIC5.91□□□□□ -1.46
HOXC6P09630 COX6B1P5-201ENST00000509843 249 ntBASIC5.91□□□□□ -1.46
HOXC6P09630 AC097515.1-201ENST00000512370 435 ntTSL 2 BASIC5.91□□□□□ -1.46
HOXC6P09630 RNU6ATAC39P-201ENST00000516309 149 ntBASIC5.91□□□□□ -1.46
HOXC6P09630 AF181450.1-201ENST00000522980 410 ntTSL 3 BASIC5.91□□□□□ -1.46
HOXC6P09630 OR7E128P-201ENST00000532736 1024 ntBASIC5.91□□□□□ -1.46
HOXC6P09630 MIR4307HG-201ENST00000548170 822 ntTSL 3 BASIC5.91□□□□□ -1.46
HOXC6P09630 AC005774.1-201ENST00000565247 567 ntTSL 4 BASIC5.91□□□□□ -1.46
HOXC6P09630 PWRN1-206ENST00000565512 433 ntTSL 2 BASIC5.91□□□□□ -1.46
HOXC6P09630 AC090330.1-201ENST00000588646 764 ntBASIC5.91□□□□□ -1.46
HOXC6P09630 UBL5-207ENST00000590068 390 ntAPPRIS P1 TSL 5 BASIC5.91□□□□□ -1.46
HOXC6P09630 AC008745.1-201ENST00000604064 271 ntBASIC5.91□□□□□ -1.46
HOXC6P09630 AC009027.1-201ENST00000604510 479 ntBASIC5.91□□□□□ -1.46
HOXC6P09630 MEMO1P5-201ENST00000604810 406 ntBASIC5.91□□□□□ -1.46
HOXC6P09630 AC026786.2-201ENST00000606110 392 ntTSL 3 BASIC5.91□□□□□ -1.46
HOXC6P09630 AC044839.1-205ENST00000614989 542 ntTSL 5 BASIC5.91□□□□□ -1.46
HOXC6P09630 MIR7703-201ENST00000620784 77 ntBASIC5.91□□□□□ -1.46
HOXC6P09630 AP000346.3-201ENST00000622821 210 ntBASIC5.91□□□□□ -1.46
HOXC6P09630 AC002384.2-201ENST00000636036 790 ntTSL 3 BASIC5.91□□□□□ -1.46
HOXC6P09630 C2orf83-206ENST00000642055 453 ntAPPRIS P3 BASIC5.91□□□□□ -1.46
HOXC6P09630 SELL-201ENST00000236147 2436 ntAPPRIS P1 TSL 1 (best) BASIC5.91□□□□□ -1.46
HOXC6P09630 RAP1GDS1-206ENST00000453712 2470 ntAPPRIS ALT1 TSL 1 (best) BASIC5.91□□□□□ -1.46
HOXC6P09630 BX284613.1-201ENST00000452221 1641 ntBASIC5.91□□□□□ -1.46
HOXC6P09630 SLC12A6-216ENST00000560164 3744 ntTSL 2 BASIC5.91□□□□□ -1.46
HOXC6P09630 AC099673.1-201ENST00000452199 2296 ntTSL 2 BASIC5.91□□□□□ -1.46
HOXC6P09630 AC079097.1-201ENST00000512187 1399 ntBASIC5.91□□□□□ -1.46
HOXC6P09630 TNFSF4-202ENST00000367718 3429 ntTSL 1 (best) BASIC5.9□□□□□ -1.46
HOXC6P09630 ZBTB44-210ENST00000530205 2179 ntTSL 1 (best) BASIC5.9□□□□□ -1.46
HOXC6P09630 PCLO-201ENST00000333891 20329 ntAPPRIS P1 TSL 2 BASIC5.9□□□□□ -1.46
HOXC6P09630 TM4SF20-201ENST00000304568 2296 ntAPPRIS P1 TSL 1 (best) BASIC5.9□□□□□ -1.46
HOXC6P09630 LINC01951-201ENST00000377300 1925 ntTSL 2 BASIC5.9□□□□□ -1.46
HOXC6P09630 SLC1A3-202ENST00000381918 3652 ntTSL 1 (best) BASIC5.9□□□□□ -1.46
HOXC6P09630 LRRN3-204ENST00000451085 3725 ntAPPRIS P1 TSL 2 BASIC5.9□□□□□ -1.46
HOXC6P09630 DNTTIP2-202ENST00000436063 5897 ntAPPRIS P1 TSL 1 (best) BASIC5.9□□□□□ -1.46
HOXC6P09630 TMED3-202ENST00000424155 16555 ntTSL 3 BASIC5.9□□□□□ -1.46
HOXC6P09630 AC079741.1-201ENST00000321498 212 ntBASIC5.9□□□□□ -1.46
HOXC6P09630 SAMD13-204ENST00000370671 724 ntTSL 3 BASIC5.9□□□□□ -1.46
HOXC6P09630 RNU6-398P-201ENST00000384143 109 ntBASIC5.9□□□□□ -1.46
HOXC6P09630 RNU6-1176P-201ENST00000390955 107 ntBASIC5.9□□□□□ -1.46
HOXC6P09630 AP002530.1-201ENST00000405705 684 ntBASIC5.9□□□□□ -1.46
HOXC6P09630 AL590666.1-201ENST00000428641 433 ntTSL 2 BASIC5.9□□□□□ -1.46
HOXC6P09630 HSFY7P-201ENST00000432672 318 ntBASIC5.9□□□□□ -1.46
HOXC6P09630 HSFY8P-201ENST00000437934 318 ntBASIC5.9□□□□□ -1.46
HOXC6P09630 PRPF38AP2-201ENST00000438179 851 ntBASIC5.9□□□□□ -1.46
HOXC6P09630 GSTA7P-201ENST00000438425 448 ntBASIC5.9□□□□□ -1.46
HOXC6P09630 MTCO3P43-201ENST00000440974 771 ntBASIC5.9□□□□□ -1.46
HOXC6P09630 AC096644.1-201ENST00000446169 390 ntTSL 3 BASIC5.9□□□□□ -1.46
HOXC6P09630 AC034228.3-201ENST00000446275 562 ntTSL 3 BASIC5.9□□□□□ -1.46
HOXC6P09630 RAD1P2-201ENST00000446414 663 ntBASIC5.9□□□□□ -1.46
HOXC6P09630 AL138767.2-201ENST00000446794 168 ntTSL 3 BASIC5.9□□□□□ -1.46
HOXC6P09630 AC048351.1-202ENST00000449483 735 ntTSL 3 BASIC5.9□□□□□ -1.46
HOXC6P09630 HSFY5P-201ENST00000453726 309 ntBASIC5.9□□□□□ -1.46
HOXC6P09630 AC008897.1-201ENST00000494006 347 ntBASIC5.9□□□□□ -1.46
HOXC6P09630 AC090058.1-201ENST00000498788 435 ntBASIC5.9□□□□□ -1.46
HOXC6P09630 AC021180.1-201ENST00000508581 558 ntTSL 4 BASIC5.9□□□□□ -1.46
HOXC6P09630 AC010451.1-201ENST00000509057 556 ntTSL 3 BASIC5.9□□□□□ -1.46
HOXC6P09630 AC107396.1-201ENST00000509641 735 ntTSL 5 BASIC5.9□□□□□ -1.46
HOXC6P09630 LINC01088-208ENST00000511895 795 ntTSL 2 BASIC5.9□□□□□ -1.46
HOXC6P09630 OR7H2P-201ENST00000513483 306 ntBASIC5.9□□□□□ -1.46
HOXC6P09630 IGKV1-32-201ENST00000519290 311 ntBASIC5.9□□□□□ -1.46
Retrieved 100 of 98,524 protein–RNA pairs in 157.6 ms