Protein–RNA interactions for Protein: P08254

MMP3, Stromelysin-1, humanhuman

Predictions only

Length 477 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MMP3P08254 TAS2R31-201ENST00000390675 1021 ntAPPRIS P1 BASIC5.83□□□□□ -1.48
MMP3P08254 NRG4-201ENST00000394907 1159 ntAPPRIS P1 TSL 1 (best) BASIC5.83□□□□□ -1.48
MMP3P08254 AC092111.3-201ENST00000402465 496 ntAPPRIS P1 TSL 2 BASIC5.83□□□□□ -1.48
MMP3P08254 LINC00463-201ENST00000413501 1147 ntTSL 3 BASIC5.83□□□□□ -1.48
MMP3P08254 AC002064.2-201ENST00000420245 289 ntTSL 3 BASIC5.83□□□□□ -1.48
MMP3P08254 RPL12P43-201ENST00000420608 499 ntBASIC5.83□□□□□ -1.48
MMP3P08254 AL354956.1-201ENST00000424487 467 ntTSL 5 BASIC5.83□□□□□ -1.48
MMP3P08254 RPS29P10-201ENST00000439197 166 ntBASIC5.83□□□□□ -1.48
MMP3P08254 PARGP1-202ENST00000440803 790 ntTSL 2 BASIC5.83□□□□□ -1.48
MMP3P08254 AC073648.4-201ENST00000442655 781 ntBASIC5.83□□□□□ -1.48
MMP3P08254 AC005772.1-201ENST00000446671 976 ntTSL 1 (best) BASIC5.83□□□□□ -1.48
MMP3P08254 CASP12-208ENST00000448103 1071 ntTSL 1 (best) BASIC5.83□□□□□ -1.48
MMP3P08254 VN1R48P-201ENST00000448149 1036 ntBASIC5.83□□□□□ -1.48
MMP3P08254 AL353718.1-201ENST00000451028 517 ntBASIC5.83□□□□□ -1.48
MMP3P08254 AL592431.1-201ENST00000451090 317 ntTSL 3 BASIC5.83□□□□□ -1.48
MMP3P08254 CBX1P2-201ENST00000453841 458 ntBASIC5.83□□□□□ -1.48
MMP3P08254 OR9N1P-201ENST00000491296 333 ntBASIC5.83□□□□□ -1.48
MMP3P08254 CASP12-210ENST00000494737 961 ntTSL 1 (best) BASIC5.83□□□□□ -1.48
MMP3P08254 AC109439.2-201ENST00000502421 564 ntTSL 4 BASIC5.83□□□□□ -1.48
MMP3P08254 LINC01332-201ENST00000506612 502 ntTSL 4 BASIC5.83□□□□□ -1.48
MMP3P08254 AC025768.1-201ENST00000510057 267 ntBASIC5.83□□□□□ -1.48
MMP3P08254 LINC00535-203ENST00000520096 790 ntTSL 3 BASIC5.83□□□□□ -1.48
MMP3P08254 RPS15A-203ENST00000563390 525 ntAPPRIS P1 TSL 1 (best) BASIC5.83□□□□□ -1.48
MMP3P08254 LINC01859-201ENST00000565584 1024 ntTSL 1 (best) BASIC5.83□□□□□ -1.48
MMP3P08254 AC093330.1-201ENST00000583326 568 ntTSL 4 BASIC5.83□□□□□ -1.48
MMP3P08254 SRD5A3-AS1-204ENST00000592823 542 ntTSL 5 BASIC5.83□□□□□ -1.48
MMP3P08254 ST8SIA4-201ENST00000231461 6303 ntAPPRIS P1 TSL 1 (best) BASIC5.83□□□□□ -1.48
MMP3P08254 PATE4-201ENST00000457514 1983 ntAPPRIS P2 TSL 2 BASIC5.83□□□□□ -1.48
MMP3P08254 AL132656.3-201ENST00000606384 1595 ntBASIC5.83□□□□□ -1.48
MMP3P08254 MCM10-201ENST00000378694 4587 ntTSL 5 BASIC5.83□□□□□ -1.48
MMP3P08254 MECOM-202ENST00000433243 3508 ntTSL 1 (best) BASIC5.83□□□□□ -1.48
MMP3P08254 PCGF5-201ENST00000336126 7018 ntAPPRIS P1 TSL 1 (best) BASIC5.83□□□□□ -1.48
MMP3P08254 NKAIN2-204ENST00000545433 3052 ntTSL 5 BASIC5.83□□□□□ -1.48
MMP3P08254 NBPF19-201ENST00000369227 3670 ntTSL 5 BASIC5.83□□□□□ -1.48
MMP3P08254 NBPF20-203ENST00000594479 3670 ntTSL 5 BASIC5.83□□□□□ -1.48
MMP3P08254 NBPF14-210ENST00000621066 3670 ntTSL 5 BASIC5.83□□□□□ -1.48
MMP3P08254 SLC16A9-201ENST00000395347 3646 ntAPPRIS P1 TSL 2 BASIC5.82□□□□□ -1.48
MMP3P08254 PRKAA1-204ENST00000397128 5088 ntAPPRIS P1 TSL 1 (best) BASIC5.82□□□□□ -1.48
MMP3P08254 FBXO3-213ENST00000534136 3217 ntTSL 5 BASIC5.82□□□□□ -1.48
MMP3P08254 CASC19-221ENST00000641309 1382 ntBASIC5.82□□□□□ -1.48
MMP3P08254 DDX3Y-201ENST00000336079 4445 ntAPPRIS P1 TSL 1 (best) BASIC5.82□□□□□ -1.48
MMP3P08254 ALG10B-201ENST00000308742 10253 ntAPPRIS P1 TSL 1 (best) BASIC5.82□□□□□ -1.48
MMP3P08254 GTDC1-204ENST00000392869 10514 ntAPPRIS P1 TSL 5 BASIC5.82□□□□□ -1.48
MMP3P08254 TMEM257-201ENST00000408967 2441 ntAPPRIS P1 BASIC5.82□□□□□ -1.48
MMP3P08254 AC092681.1-201ENST00000297369 291 ntBASIC5.82□□□□□ -1.48
MMP3P08254 RN7SKP95-201ENST00000362860 303 ntBASIC5.82□□□□□ -1.48
MMP3P08254 LINC01317-201ENST00000366209 779 ntTSL 5 BASIC5.82□□□□□ -1.48
MMP3P08254 RNU4-64P-201ENST00000410795 131 ntBASIC5.82□□□□□ -1.48
MMP3P08254 AL390036.1-201ENST00000419428 734 ntTSL 5 BASIC5.82□□□□□ -1.48
MMP3P08254 AL353689.2-201ENST00000433837 440 ntTSL 3 BASIC5.82□□□□□ -1.48
MMP3P08254 AC073062.1-201ENST00000434509 455 ntTSL 5 BASIC5.82□□□□□ -1.48
MMP3P08254 NDUFB4P8-201ENST00000435351 367 ntBASIC5.82□□□□□ -1.48
MMP3P08254 AL591719.2-201ENST00000437400 386 ntTSL 3 BASIC5.82□□□□□ -1.48
MMP3P08254 ELOCP3-201ENST00000439303 348 ntBASIC5.82□□□□□ -1.48
MMP3P08254 KNOP1P3-201ENST00000446933 426 ntBASIC5.82□□□□□ -1.48
MMP3P08254 AL353152.1-201ENST00000455973 470 ntTSL 5 BASIC5.82□□□□□ -1.48
MMP3P08254 AC092324.1-201ENST00000468671 324 ntBASIC5.82□□□□□ -1.48
MMP3P08254 AC026316.2-201ENST00000473110 263 ntTSL 3 BASIC5.82□□□□□ -1.48
MMP3P08254 AC015908.1-201ENST00000478739 476 ntBASIC5.82□□□□□ -1.48
MMP3P08254 AC073359.2-201ENST00000478814 351 ntTSL 3 BASIC5.82□□□□□ -1.48
MMP3P08254 HMGN2P25-201ENST00000486956 268 ntBASIC5.82□□□□□ -1.48
MMP3P08254 AC007686.1-201ENST00000488511 463 ntBASIC5.82□□□□□ -1.48
MMP3P08254 AC119150.1-201ENST00000507143 563 ntTSL 2 BASIC5.82□□□□□ -1.48
MMP3P08254 ZCCHC10-209ENST00000513541 794 ntAPPRIS ALT2 TSL 2 BASIC5.82□□□□□ -1.48
MMP3P08254 AC026719.2-201ENST00000515656 295 ntTSL 3 BASIC5.82□□□□□ -1.48
MMP3P08254 RN7SKP260-201ENST00000516907 149 ntBASIC5.82□□□□□ -1.48
MMP3P08254 AP003049.1-201ENST00000529418 457 ntBASIC5.82□□□□□ -1.48
MMP3P08254 OR4A6P-201ENST00000534364 970 ntBASIC5.82□□□□□ -1.48
MMP3P08254 LINC02188-201ENST00000562064 550 ntTSL 4 BASIC5.82□□□□□ -1.48
MMP3P08254 AC090617.5-201ENST00000571815 528 ntTSL 3 BASIC5.82□□□□□ -1.48
MMP3P08254 BNIP3P35-201ENST00000604530 490 ntBASIC5.82□□□□□ -1.48
MMP3P08254 BNIP3P19-201ENST00000605397 577 ntBASIC5.82□□□□□ -1.48
MMP3P08254 AL590410.1-201ENST00000617925 333 ntBASIC5.82□□□□□ -1.48
MMP3P08254 AC026367.3-201ENST00000619032 590 ntBASIC5.82□□□□□ -1.48
MMP3P08254 AC092813.1-201ENST00000635455 969 ntTSL 5 BASIC5.82□□□□□ -1.48
MMP3P08254 SH3YL1-203ENST00000403657 3540 ntTSL 2 BASIC5.82□□□□□ -1.48
MMP3P08254 LINC00598-206ENST00000615947 3541 ntTSL 4 BASIC5.82□□□□□ -1.48
MMP3P08254 FAM197Y3-202ENST00000427622 2325 ntTSL 5 BASIC5.82□□□□□ -1.48
MMP3P08254 FAM197Y7-202ENST00000433321 2325 ntTSL 2 BASIC5.82□□□□□ -1.48
MMP3P08254 DYNAP-201ENST00000321600 2027 ntAPPRIS P3 TSL 2 BASIC5.82□□□□□ -1.48
MMP3P08254 CASP1-215ENST00000533400 2001 ntAPPRIS P4 TSL 1 (best) BASIC5.82□□□□□ -1.48
MMP3P08254 SETD2-202ENST00000409792 8142 ntAPPRIS P1 TSL 5 BASIC5.82□□□□□ -1.48
MMP3P08254 PKIA-201ENST00000352966 1736 ntAPPRIS P1 TSL 2 BASIC5.82□□□□□ -1.48
MMP3P08254 TDO2-208ENST00000536354 1701 ntAPPRIS P1 TSL 1 (best) BASIC5.82□□□□□ -1.48
MMP3P08254 MCM9-209ENST00000619706 4822 ntAPPRIS P1 TSL 5 BASIC5.82□□□□□ -1.48
MMP3P08254 CASC8-203ENST00000502082 1420 ntTSL 1 (best) BASIC5.82□□□□□ -1.48
MMP3P08254 CALN1-203ENST00000395276 9189 ntAPPRIS P3 TSL 1 (best) BASIC5.82□□□□□ -1.48
MMP3P08254 GPR18-201ENST00000340807 1698 ntAPPRIS P1 TSL 1 (best) BASIC5.82□□□□□ -1.48
MMP3P08254 TNFSF4-202ENST00000367718 3429 ntTSL 1 (best) BASIC5.81□□□□□ -1.48
MMP3P08254 KYAT3-203ENST00000370491 1868 ntAPPRIS ALT1 TSL 2 BASIC5.81□□□□□ -1.48
MMP3P08254 SGIP1-203ENST00000371037 7768 ntAPPRIS P3 TSL 1 (best) BASIC5.81□□□□□ -1.48
MMP3P08254 TYW3-203ENST00000457880 3335 ntTSL 2 BASIC5.81□□□□□ -1.48
MMP3P08254 AC034229.2-201ENST00000566945 2508 ntBASIC5.81□□□□□ -1.48
MMP3P08254 CDC42BPA-201ENST00000334218 10134 ntTSL 5 BASIC5.81□□□□□ -1.48
MMP3P08254 MFSD8-201ENST00000296468 4516 ntAPPRIS P1 TSL 1 (best) BASIC5.81□□□□□ -1.48
MMP3P08254 ATP6V1G3-201ENST00000281087 630 ntAPPRIS P1 TSL 5 BASIC5.81□□□□□ -1.48
MMP3P08254 ATP6V1G3-202ENST00000309309 678 ntTSL 5 BASIC5.81□□□□□ -1.48
MMP3P08254 AL353625.1-202ENST00000366273 571 ntBASIC5.81□□□□□ -1.48
MMP3P08254 SPHAR-201ENST00000366688 648 ntAPPRIS P1 BASIC5.81□□□□□ -1.48
MMP3P08254 OR8V1P-201ENST00000395193 873 ntBASIC5.81□□□□□ -1.48
Retrieved 100 of 98,524 protein–RNA pairs in 94.1 ms