Protein–RNA interactions for Protein: P06400

RB1, Retinoblastoma-associated protein, humanhuman

Predictions only

Length 928 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RB1P06400 RPS4XP9-201ENST00000405151 780 ntBASIC5.75□□□□□ -1.49
RB1P06400 AC021876.1-201ENST00000425959 359 ntBASIC5.75□□□□□ -1.49
RB1P06400 AL513323.1-201ENST00000431862 1063 ntTSL 1 (best) BASIC5.75□□□□□ -1.49
RB1P06400 ZFAND6P1-201ENST00000434138 605 ntBASIC5.75□□□□□ -1.49
RB1P06400 AF127577.2-201ENST00000436429 824 ntTSL 3 BASIC5.75□□□□□ -1.49
RB1P06400 BX679664.2-201ENST00000439282 283 ntBASIC5.75□□□□□ -1.49
RB1P06400 RPS15AP29-201ENST00000445539 400 ntBASIC5.75□□□□□ -1.49
RB1P06400 AL589703.1-201ENST00000456032 256 ntTSL 5 BASIC5.75□□□□□ -1.49
RB1P06400 DAP3-209ENST00000465375 729 ntTSL 2 BASIC5.75□□□□□ -1.49
RB1P06400 AC104629.2-201ENST00000468627 598 ntBASIC5.75□□□□□ -1.49
RB1P06400 AC097484.1-201ENST00000471148 389 ntBASIC5.75□□□□□ -1.49
RB1P06400 LINC01192-207ENST00000492553 836 ntTSL 5 BASIC5.75□□□□□ -1.49
RB1P06400 UBE2D3-217ENST00000504211 578 ntTSL 2 BASIC5.75□□□□□ -1.49
RB1P06400 GIN1-203ENST00000508629 1040 ntTSL 1 (best) BASIC5.75□□□□□ -1.49
RB1P06400 COL6A4P2-205ENST00000509855 506 ntBASIC5.75□□□□□ -1.49
RB1P06400 RNA5SP373-201ENST00000517271 95 ntBASIC5.75□□□□□ -1.49
RB1P06400 YWHABP2-201ENST00000540201 713 ntBASIC5.75□□□□□ -1.49
RB1P06400 AL929601.2-201ENST00000549951 381 ntTSL 4 BASIC5.75□□□□□ -1.49
RB1P06400 AC137768.1-201ENST00000549998 553 ntBASIC5.75□□□□□ -1.49
RB1P06400 AC063949.1-201ENST00000552900 865 ntBASIC5.75□□□□□ -1.49
RB1P06400 LINC00871-201ENST00000555246 408 ntTSL 5 BASIC5.75□□□□□ -1.49
RB1P06400 AC018523.2-201ENST00000555531 1221 ntAPPRIS P1 TSL 2 BASIC5.75□□□□□ -1.49
RB1P06400 AC010528.1-201ENST00000568714 739 ntTSL 4 BASIC5.75□□□□□ -1.49
RB1P06400 AC068025.2-201ENST00000584958 419 ntTSL 5 BASIC5.75□□□□□ -1.49
RB1P06400 AP001267.4-201ENST00000602598 545 ntBASIC5.75□□□□□ -1.49
RB1P06400 AC087783.2-201ENST00000605070 562 ntBASIC5.75□□□□□ -1.49
RB1P06400 AL121904.1-201ENST00000611894 948 ntTSL 5 BASIC5.75□□□□□ -1.49
RB1P06400 AC015660.5-201ENST00000623238 564 ntBASIC5.75□□□□□ -1.49
RB1P06400 TEX41-254ENST00000626394 423 ntTSL 5 BASIC5.75□□□□□ -1.49
RB1P06400 LINC00254-202ENST00000633813 439 ntTSL 3 BASIC5.75□□□□□ -1.49
RB1P06400 GVQW2-203ENST00000641401 327 ntAPPRIS P1 BASIC5.75□□□□□ -1.49
RB1P06400 HSPA8P14-201ENST00000552265 1805 ntBASIC5.75□□□□□ -1.49
RB1P06400 CHMP1B2P-202ENST00000614414 6813 ntTSL 1 (best) BASIC5.75□□□□□ -1.49
RB1P06400 GTPBP10-201ENST00000222511 7531 ntAPPRIS P1 TSL 1 (best) BASIC5.75□□□□□ -1.49
RB1P06400 AL138820.1-201ENST00000617901 5305 ntBASIC5.75□□□□□ -1.49
RB1P06400 PEX2-201ENST00000357039 4317 ntAPPRIS P1 TSL 1 (best) BASIC5.75□□□□□ -1.49
RB1P06400 TLR2-201ENST00000260010 4200 ntAPPRIS P1 BASIC5.74□□□□□ -1.49
RB1P06400 GBA3-205ENST00000511446 2018 ntTSL 2 BASIC5.74□□□□□ -1.49
RB1P06400 EDA2R-204ENST00000451436 3464 ntAPPRIS P3 TSL 5 BASIC5.74□□□□□ -1.49
RB1P06400 NBPF26-202ENST00000611287 2701 ntTSL 5 BASIC5.74□□□□□ -1.49
RB1P06400 LINC01206-204ENST00000482787 9580 ntTSL 1 (best) BASIC5.74□□□□□ -1.49
RB1P06400 MAGI2-205ENST00000519748 3316 ntTSL 1 (best) BASIC5.74□□□□□ -1.49
RB1P06400 RNU6-1251P-201ENST00000364502 107 ntBASIC5.74□□□□□ -1.49
RB1P06400 MIR421-201ENST00000365696 85 ntBASIC5.74□□□□□ -1.49
RB1P06400 ATP6V1G3-203ENST00000367382 611 ntAPPRIS P1 TSL 1 (best) BASIC5.74□□□□□ -1.49
RB1P06400 RNA5SP87-201ENST00000384155 118 ntBASIC5.74□□□□□ -1.49
RB1P06400 OR4K12P-201ENST00000406538 961 ntBASIC5.74□□□□□ -1.49
RB1P06400 AC016397.1-201ENST00000412463 242 ntBASIC5.74□□□□□ -1.49
RB1P06400 AC034195.1-201ENST00000420000 559 ntTSL 4 BASIC5.74□□□□□ -1.49
RB1P06400 GLUD1P9-201ENST00000420997 1173 ntBASIC5.74□□□□□ -1.49
RB1P06400 MRPS21P2-201ENST00000424704 264 ntBASIC5.74□□□□□ -1.49
RB1P06400 MIR99AHG-205ENST00000435697 716 ntTSL 2 BASIC5.74□□□□□ -1.49
RB1P06400 AC016292.1-201ENST00000438344 235 ntTSL 3 BASIC5.74□□□□□ -1.49
RB1P06400 KRT8P51-201ENST00000438938 274 ntBASIC5.74□□□□□ -1.49
RB1P06400 MTCO3P43-201ENST00000440974 771 ntBASIC5.74□□□□□ -1.49
RB1P06400 AL731574.1-201ENST00000447757 456 ntTSL 5 BASIC5.74□□□□□ -1.49
RB1P06400 AL157884.3-201ENST00000448273 1184 ntBASIC5.74□□□□□ -1.49
RB1P06400 LINC02339-201ENST00000472649 752 ntTSL 1 (best) BASIC5.74□□□□□ -1.49
RB1P06400 AC108157.1-201ENST00000510511 539 ntBASIC5.74□□□□□ -1.49
RB1P06400 GTF2F2P1-201ENST00000511083 675 ntBASIC5.74□□□□□ -1.49
RB1P06400 AC137627.1-201ENST00000545761 289 ntBASIC5.74□□□□□ -1.49
RB1P06400 AC016987.1-201ENST00000558587 499 ntTSL 2 BASIC5.74□□□□□ -1.49
RB1P06400 NPM1P42-201ENST00000560329 862 ntBASIC5.74□□□□□ -1.49
RB1P06400 BCAR4-204ENST00000573319 1273 ntTSL 5 BASIC5.74□□□□□ -1.49
RB1P06400 AC008738.1-201ENST00000590117 375 ntTSL 5 BASIC5.74□□□□□ -1.49
RB1P06400 AC087283.1-201ENST00000604029 1074 ntBASIC5.74□□□□□ -1.49
RB1P06400 AC092902.2-219ENST00000608488 822 ntTSL 5 BASIC5.74□□□□□ -1.49
RB1P06400 AC093799.2-201ENST00000610062 578 ntBASIC5.74□□□□□ -1.49
RB1P06400 NLRP3P1-201ENST00000622303 1785 ntBASIC5.74□□□□□ -1.49
RB1P06400 LGI1-202ENST00000371418 2381 ntAPPRIS P1 TSL 1 (best) BASIC5.74□□□□□ -1.49
RB1P06400 DCAF8L1-201ENST00000441525 3457 ntAPPRIS P1 BASIC5.74□□□□□ -1.49
RB1P06400 AC092070.2-203ENST00000598377 3644 ntBASIC5.74□□□□□ -1.49
RB1P06400 XPNPEP3-201ENST00000357137 7988 ntAPPRIS P1 TSL 1 (best) BASIC5.74□□□□□ -1.49
RB1P06400 ZNF81-202ENST00000338637 7859 ntAPPRIS P1 TSL 3 BASIC5.74□□□□□ -1.49
RB1P06400 KRT222-202ENST00000394052 1712 ntAPPRIS P1 TSL 1 (best) BASIC5.74□□□□□ -1.49
RB1P06400 PHACTR2-207ENST00000427704 9531 ntAPPRIS ALT2 TSL 1 (best) BASIC5.73□□□□□ -1.49
RB1P06400 LINC01153-201ENST00000429809 2864 ntTSL 1 (best) BASIC5.73□□□□□ -1.49
RB1P06400 LINC00906-206ENST00000589921 3444 ntTSL 1 (best) BASIC5.73□□□□□ -1.49
RB1P06400 ARHGAP24-201ENST00000264343 4572 ntTSL 1 (best) BASIC5.73□□□□□ -1.49
RB1P06400 OR9K1P-202ENST00000641111 3217 ntBASIC5.73□□□□□ -1.49
RB1P06400 FAM205BP-203ENST00000455647 3752 ntTSL 1 (best) BASIC5.73□□□□□ -1.49
RB1P06400 SGO1-205ENST00000419233 1582 ntTSL 1 (best) BASIC5.73□□□□□ -1.49
RB1P06400 SELE-204ENST00000367776 3576 ntTSL 5 BASIC5.73□□□□□ -1.49
RB1P06400 SELE-205ENST00000367777 3576 ntTSL 5 BASIC5.73□□□□□ -1.49
RB1P06400 SNURFL-201ENST00000309296 343 ntBASIC5.73□□□□□ -1.49
RB1P06400 RNU4-39P-201ENST00000362455 127 ntBASIC5.73□□□□□ -1.49
RB1P06400 AC013442.1-201ENST00000397347 228 ntBASIC5.73□□□□□ -1.49
RB1P06400 DNAJA1P3-201ENST00000399417 1194 ntBASIC5.73□□□□□ -1.49
RB1P06400 AC096921.1-201ENST00000411661 375 ntBASIC5.73□□□□□ -1.49
RB1P06400 PTP4A1P1-201ENST00000420539 515 ntBASIC5.73□□□□□ -1.49
RB1P06400 Z99127.2-201ENST00000441426 334 ntBASIC5.73□□□□□ -1.49
RB1P06400 LINC00380-201ENST00000442478 353 ntTSL 2 BASIC5.73□□□□□ -1.49
RB1P06400 TRY2P-201ENST00000448860 689 ntBASIC5.73□□□□□ -1.49
RB1P06400 AP003774.2-202ENST00000449694 341 ntTSL 3 BASIC5.73□□□□□ -1.49
RB1P06400 AC092647.2-201ENST00000452998 253 ntBASIC5.73□□□□□ -1.49
RB1P06400 AL353152.1-201ENST00000455973 470 ntTSL 5 BASIC5.73□□□□□ -1.49
RB1P06400 EIF2S2P4-201ENST00000461070 984 ntBASIC5.73□□□□□ -1.49
RB1P06400 RPL7P16-201ENST00000479738 738 ntBASIC5.73□□□□□ -1.49
RB1P06400 ACTR6P1-201ENST00000514311 1104 ntBASIC5.73□□□□□ -1.49
RB1P06400 AC124069.1-201ENST00000517454 735 ntTSL 3 BASIC5.73□□□□□ -1.49
Retrieved 100 of 98,524 protein–RNA pairs in 84.5 ms