Protein–RNA interactions for Protein: P02649

APOE, Apolipoprotein E, humanhuman

Predictions only

Length 317 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APOEP02649 ABHD15-AS1-201ENST00000581474 187 ntTSL 5 BASIC5.41□□□□□ -1.54
APOEP02649 MOCS2-209ENST00000582677 741 ntTSL 5 BASIC5.41□□□□□ -1.54
APOEP02649 AC011626.1-201ENST00000604710 562 ntBASIC5.41□□□□□ -1.54
APOEP02649 TAS2R6P-201ENST00000605022 826 ntBASIC5.41□□□□□ -1.54
APOEP02649 MIR4435-2HG-220ENST00000609902 603 ntTSL 3 BASIC5.41□□□□□ -1.54
APOEP02649 AC099494.2-201ENST00000623371 978 ntBASIC5.41□□□□□ -1.54
APOEP02649 PCDHB2-203ENST00000624874 565 ntTSL 5 BASIC5.41□□□□□ -1.54
APOEP02649 PCBP1-AS1-278ENST00000625518 864 ntTSL 5 BASIC5.41□□□□□ -1.54
APOEP02649 LRRC19-201ENST00000380055 3609 ntAPPRIS P1 TSL 1 (best) BASIC5.41□□□□□ -1.54
APOEP02649 FOXP1-IT1-201ENST00000498714 3539 ntTSL 2 BASIC5.41□□□□□ -1.54
APOEP02649 AL158066.1-201ENST00000451298 3796 ntTSL 2 BASIC5.41□□□□□ -1.54
APOEP02649 AC118758.3-201ENST00000624628 24137 ntTSL 5 BASIC5.41□□□□□ -1.54
APOEP02649 PCDH9-203ENST00000456367 5072 ntTSL 1 (best) BASIC5.41□□□□□ -1.54
APOEP02649 KLHL4-202ENST00000373119 5818 ntAPPRIS P1 TSL 1 (best) BASIC5.41□□□□□ -1.54
APOEP02649 PRLR-220ENST00000620785 11063 ntTSL 5 BASIC5.41□□□□□ -1.54
APOEP02649 DNAH8-201ENST00000327475 14360 ntAPPRIS P2 TSL 5 BASIC5.41□□□□□ -1.54
APOEP02649 MEIOB-205ENST00000470044 1857 ntTSL 2 BASIC5.41□□□□□ -1.54
APOEP02649 CTAGE5-210ENST00000553728 4392 ntAPPRIS ALT2 TSL 5 BASIC5.41□□□□□ -1.54
APOEP02649 PRUNE2-201ENST00000223609 2697 ntTSL 2 BASIC5.41□□□□□ -1.54
APOEP02649 DLG1-216ENST00000450955 2682 ntAPPRIS ALT1 TSL 5 BASIC5.41□□□□□ -1.54
APOEP02649 XIRP2-203ENST00000409195 12675 ntTSL 5 BASIC5.4□□□□□ -1.54
APOEP02649 AHCTF1-201ENST00000326225 8633 ntAPPRIS P2 TSL 1 (best) BASIC5.4□□□□□ -1.54
APOEP02649 AC021205.3-201ENST00000609680 1709 ntTSL 3 BASIC5.4□□□□□ -1.54
APOEP02649 AC073136.1-201ENST00000449426 2884 ntBASIC5.4□□□□□ -1.54
APOEP02649 AC099654.3-201ENST00000447087 1546 ntBASIC5.4□□□□□ -1.54
APOEP02649 ANO6-205ENST00000441606 5955 ntAPPRIS ALT2 TSL 1 (best) BASIC5.4□□□□□ -1.54
APOEP02649 MYO16-201ENST00000251041 3492 ntTSL 5 BASIC5.4□□□□□ -1.54
APOEP02649 ZNF845-201ENST00000458035 4311 ntAPPRIS P1 TSL 4 BASIC5.4□□□□□ -1.54
APOEP02649 OR1L4-201ENST00000259466 936 ntAPPRIS P1 BASIC5.4□□□□□ -1.54
APOEP02649 LINC01317-201ENST00000366209 779 ntTSL 5 BASIC5.4□□□□□ -1.54
APOEP02649 RNU1-74P-201ENST00000384108 171 ntBASIC5.4□□□□□ -1.54
APOEP02649 DNAJA1P4-201ENST00000406473 1166 ntBASIC5.4□□□□□ -1.54
APOEP02649 U3.36-201ENST00000408418 213 ntBASIC5.4□□□□□ -1.54
APOEP02649 Z86062.2-201ENST00000411442 380 ntTSL 5 BASIC5.4□□□□□ -1.54
APOEP02649 TMEM196-203ENST00000422233 775 ntTSL 5 BASIC5.4□□□□□ -1.54
APOEP02649 LINC01589-201ENST00000422971 548 ntTSL 1 (best) BASIC5.4□□□□□ -1.54
APOEP02649 AC104170.2-201ENST00000424246 678 ntTSL 3 BASIC5.4□□□□□ -1.54
APOEP02649 MAGI2-AS3-204ENST00000426835 738 ntTSL 3 BASIC5.4□□□□□ -1.54
APOEP02649 RPS4XP16-201ENST00000427198 791 ntBASIC5.4□□□□□ -1.54
APOEP02649 AL158835.2-201ENST00000430970 300 ntTSL 2 BASIC5.4□□□□□ -1.54
APOEP02649 AF064858.2-201ENST00000440714 292 ntTSL 3 BASIC5.4□□□□□ -1.54
APOEP02649 AL139121.1-201ENST00000445647 244 ntTSL 2 BASIC5.4□□□□□ -1.54
APOEP02649 NOP56P2-201ENST00000447491 769 ntBASIC5.4□□□□□ -1.54
APOEP02649 AC021660.1-201ENST00000465006 554 ntBASIC5.4□□□□□ -1.54
APOEP02649 RN7SL814P-201ENST00000487715 300 ntBASIC5.4□□□□□ -1.54
APOEP02649 RFPL4AP5-201ENST00000514977 504 ntBASIC5.4□□□□□ -1.54
APOEP02649 OR4A46P-201ENST00000527255 933 ntBASIC5.4□□□□□ -1.54
APOEP02649 OR8A2P-201ENST00000528631 952 ntBASIC5.4□□□□□ -1.54
APOEP02649 AC002563.1-201ENST00000535109 451 ntTSL 3 BASIC5.4□□□□□ -1.54
APOEP02649 AC007527.1-202ENST00000543347 382 ntTSL 3 BASIC5.4□□□□□ -1.54
APOEP02649 LINC00687-203ENST00000558175 696 ntTSL 3 BASIC5.4□□□□□ -1.54
APOEP02649 AC012181.3-201ENST00000565861 601 ntTSL 4 BASIC5.4□□□□□ -1.54
APOEP02649 AC007922.3-201ENST00000581648 543 ntTSL 3 BASIC5.4□□□□□ -1.54
APOEP02649 AC022154.1-203ENST00000594850 493 ntTSL 3 BASIC5.4□□□□□ -1.54
APOEP02649 AC010618.3-202ENST00000598141 476 ntTSL 3 BASIC5.4□□□□□ -1.54
APOEP02649 AC013244.1-201ENST00000604279 193 ntBASIC5.4□□□□□ -1.54
APOEP02649 AC009163.6-201ENST00000612367 342 ntBASIC5.4□□□□□ -1.54
APOEP02649 AC118658.2-201ENST00000618697 459 ntBASIC5.4□□□□□ -1.54
APOEP02649 AHNAK-202ENST00000378024 18787 ntAPPRIS P3 TSL 2 BASIC5.4□□□□□ -1.55
APOEP02649 VNN3-203ENST00000392393 1603 ntTSL 1 (best) BASIC5.4□□□□□ -1.55
APOEP02649 MTERF1-202ENST00000406735 1639 ntAPPRIS ALT2 TSL 2 BASIC5.4□□□□□ -1.55
APOEP02649 PALMD-201ENST00000263174 2510 ntAPPRIS P1 TSL 1 (best) BASIC5.4□□□□□ -1.55
APOEP02649 IPO5-201ENST00000261574 6003 ntTSL 1 (best) BASIC5.39□□□□□ -1.55
APOEP02649 OTOGL-204ENST00000547103 8032 ntAPPRIS ALT2 TSL 5 BASIC5.39□□□□□ -1.55
APOEP02649 FAM46D-202ENST00000538312 3106 ntAPPRIS P1 TSL 2 BASIC5.39□□□□□ -1.55
APOEP02649 SMG1P7-201ENST00000565246 2704 ntBASIC5.39□□□□□ -1.55
APOEP02649 TTC3-204ENST00000399017 10363 ntAPPRIS P1 TSL 1 (best) BASIC5.39□□□□□ -1.55
APOEP02649 AMELX-201ENST00000348912 737 ntTSL 5 BASIC5.39□□□□□ -1.55
APOEP02649 RNA5SP507-201ENST00000363603 121 ntBASIC5.39□□□□□ -1.55
APOEP02649 MRM2-202ENST00000407040 582 ntTSL 3 BASIC5.39□□□□□ -1.55
APOEP02649 MIR1182-201ENST00000408363 97 ntBASIC5.39□□□□□ -1.55
APOEP02649 RN7SKP213-201ENST00000410746 298 ntBASIC5.39□□□□□ -1.55
APOEP02649 AC013472.2-201ENST00000416226 306 ntTSL 3 BASIC5.39□□□□□ -1.55
APOEP02649 EI24P4-201ENST00000423683 1078 ntBASIC5.39□□□□□ -1.55
APOEP02649 LINC01740-201ENST00000423842 332 ntTSL 2 BASIC5.39□□□□□ -1.55
APOEP02649 TCEA1P3-201ENST00000443005 880 ntBASIC5.39□□□□□ -1.55
APOEP02649 AC093763.2-201ENST00000505334 1223 ntBASIC5.39□□□□□ -1.55
APOEP02649 AC010395.1-201ENST00000507627 697 ntTSL 5 BASIC5.39□□□□□ -1.55
APOEP02649 RNU6-964P-201ENST00000516524 69 ntBASIC5.39□□□□□ -1.55
APOEP02649 AC100784.1-201ENST00000522790 310 ntBASIC5.39□□□□□ -1.55
APOEP02649 OR11J2P-201ENST00000555298 907 ntBASIC5.39□□□□□ -1.55
APOEP02649 NQO1-206ENST00000564043 892 ntTSL 1 (best) BASIC5.39□□□□□ -1.55
APOEP02649 AC022884.2-201ENST00000578535 580 ntBASIC5.39□□□□□ -1.55
APOEP02649 AC015845.2-201ENST00000581805 472 ntTSL 2 BASIC5.39□□□□□ -1.55
APOEP02649 MIR4472-2-201ENST00000582069 67 ntBASIC5.39□□□□□ -1.55
APOEP02649 AC097467.3-209ENST00000595760 615 ntTSL 5 BASIC5.39□□□□□ -1.55
APOEP02649 AC010320.2-203ENST00000601745 574 ntTSL 4 BASIC5.39□□□□□ -1.55
APOEP02649 Z98949.1-220ENST00000609809 804 ntTSL 5 BASIC5.39□□□□□ -1.55
APOEP02649 AP005131.7-201ENST00000610087 611 ntBASIC5.39□□□□□ -1.55
APOEP02649 DEC1-204ENST00000614246 210 ntAPPRIS ALT2 TSL 1 (best) BASIC5.39□□□□□ -1.55
APOEP02649 RPSAP73-201ENST00000614820 330 ntBASIC5.39□□□□□ -1.55
APOEP02649 SHMT1-211ENST00000618902 378 ntTSL 5 BASIC5.39□□□□□ -1.55
APOEP02649 LAMTOR5-AS1-233ENST00000625451 470 ntTSL 5 BASIC5.39□□□□□ -1.55
APOEP02649 CFH-206ENST00000630130 1658 ntTSL 1 (best) BASIC5.39□□□□□ -1.55
APOEP02649 XIST-204ENST00000429829 19275 ntTSL 1 (best) BASIC5.39□□□□□ -1.55
APOEP02649 EPHA3-202ENST00000452448 2546 ntTSL 1 (best) BASIC5.39□□□□□ -1.55
APOEP02649 NEAT1-202ENST00000501122 22743 ntBASIC5.39□□□□□ -1.55
APOEP02649 GTDC1-220ENST00000618778 2317 ntTSL 5 BASIC5.39□□□□□ -1.55
APOEP02649 AC006210.2-201ENST00000367074 1545 ntBASIC5.38□□□□□ -1.55
APOEP02649 PANDAR-201ENST00000629595 1506 ntBASIC5.38□□□□□ -1.55
Retrieved 100 of 98,524 protein–RNA pairs in 101.9 ms