Protein–RNA interactions for Protein: P02549

SPTA1, Spectrin alpha chain, erythrocytic 1, humanhuman

Predictions only

Length 2,419 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPTA1P02549 AL445465.1-206ENST00000609544 528 ntTSL 5 BASIC4.7□□□□□ -1.66
SPTA1P02549 AC243585.1-201ENST00000617867 607 ntTSL 3 BASIC4.7□□□□□ -1.66
SPTA1P02549 AL445567.2-201ENST00000618935 498 ntBASIC4.7□□□□□ -1.66
SPTA1P02549 AC105411.1-201ENST00000568776 1470 ntTSL 4 BASIC4.7□□□□□ -1.66
SPTA1P02549 MYBPC1-204ENST00000452455 3861 ntAPPRIS ALT2 TSL 2 BASIC4.7□□□□□ -1.66
SPTA1P02549 VNN3-207ENST00000425515 1761 ntTSL 1 (best) BASIC4.7□□□□□ -1.66
SPTA1P02549 ZNF253-203ENST00000589717 3519 ntAPPRIS P1 TSL 1 (best) BASIC4.7□□□□□ -1.66
SPTA1P02549 INPP4B-220ENST00000513000 8831 ntAPPRIS P1 TSL 1 (best) BASIC4.7□□□□□ -1.66
SPTA1P02549 MAP3K19-203ENST00000375845 4369 ntAPPRIS P3 TSL 1 (best) BASIC4.7□□□□□ -1.66
SPTA1P02549 AKAP6-212ENST00000557272 4601 ntTSL 5 BASIC4.7□□□□□ -1.66
SPTA1P02549 NCOA1-206ENST00000407230 4745 ntTSL 1 (best) BASIC4.7□□□□□ -1.66
SPTA1P02549 DCDC1-203ENST00000406071 4758 ntAPPRIS P2 TSL 5 BASIC4.7□□□□□ -1.66
SPTA1P02549 GSTA3-201ENST00000211122 902 ntAPPRIS P1 TSL 1 (best) BASIC4.7□□□□□ -1.66
SPTA1P02549 OR1L8-201ENST00000304865 1061 ntAPPRIS P1 BASIC4.7□□□□□ -1.66
SPTA1P02549 RNA5SP447-201ENST00000363749 119 ntBASIC4.7□□□□□ -1.66
SPTA1P02549 RPL11P3-201ENST00000395256 523 ntBASIC4.7□□□□□ -1.66
SPTA1P02549 CYP2AC1P-201ENST00000407830 1173 ntBASIC4.7□□□□□ -1.66
SPTA1P02549 AL354726.1-201ENST00000411981 402 ntTSL 2 BASIC4.7□□□□□ -1.66
SPTA1P02549 AL592293.2-201ENST00000422292 996 ntBASIC4.7□□□□□ -1.66
SPTA1P02549 GAS5-208ENST00000425771 242 ntTSL 3 BASIC4.7□□□□□ -1.66
SPTA1P02549 RSU1P1-201ENST00000453416 441 ntBASIC4.7□□□□□ -1.66
SPTA1P02549 OR4A6P-201ENST00000534364 970 ntBASIC4.7□□□□□ -1.66
SPTA1P02549 AC007922.3-201ENST00000581648 543 ntTSL 3 BASIC4.7□□□□□ -1.66
SPTA1P02549 AC005899.1-201ENST00000584125 563 ntTSL 5 BASIC4.7□□□□□ -1.66
SPTA1P02549 AC008543.3-201ENST00000586983 491 ntTSL 5 BASIC4.7□□□□□ -1.66
SPTA1P02549 AL138960.1-201ENST00000613838 513 ntBASIC4.7□□□□□ -1.66
SPTA1P02549 CR381572.2-201ENST00000624852 397 ntBASIC4.7□□□□□ -1.66
SPTA1P02549 AL513550.1-201ENST00000418945 1638 ntTSL 2 BASIC4.69□□□□□ -1.66
SPTA1P02549 AC114774.1-201ENST00000507410 1770 ntBASIC4.69□□□□□ -1.66
SPTA1P02549 PLEKHS1-204ENST00000369310 2046 ntAPPRIS ALT2 TSL 1 (best) BASIC4.69□□□□□ -1.66
SPTA1P02549 VPS13D-214ENST00000620676 16320 ntAPPRIS P4 TSL 1 (best) BASIC4.69□□□□□ -1.66
SPTA1P02549 DUSP19-202ENST00000354221 5176 ntAPPRIS P1 TSL 1 (best) BASIC4.69□□□□□ -1.66
SPTA1P02549 AL355834.1-201ENST00000556602 3965 ntBASIC4.69□□□□□ -1.66
SPTA1P02549 AL391262.1-201ENST00000556558 1992 ntBASIC4.69□□□□□ -1.66
SPTA1P02549 PMCHL2-201ENST00000415808 1841 ntTSL 1 (best) BASIC4.69□□□□□ -1.66
SPTA1P02549 RBPJP2-201ENST00000618187 1444 ntBASIC4.69□□□□□ -1.66
SPTA1P02549 SGK3-201ENST00000345714 4055 ntAPPRIS P1 TSL 1 (best) BASIC4.69□□□□□ -1.66
SPTA1P02549 CXorf65-201ENST00000374251 601 ntAPPRIS P1 TSL 5 BASIC4.69□□□□□ -1.66
SPTA1P02549 AC007327.2-201ENST00000440788 457 ntTSL 3 BASIC4.69□□□□□ -1.66
SPTA1P02549 RPL6P5-201ENST00000445678 828 ntBASIC4.69□□□□□ -1.66
SPTA1P02549 MACROD2-IT1-201ENST00000448536 665 ntTSL 5 BASIC4.69□□□□□ -1.66
SPTA1P02549 AL592431.1-201ENST00000451090 317 ntTSL 3 BASIC4.69□□□□□ -1.66
SPTA1P02549 AC079168.1-201ENST00000458741 345 ntBASIC4.69□□□□□ -1.66
SPTA1P02549 MME-AS1-201ENST00000484721 828 ntTSL 2 BASIC4.69□□□□□ -1.66
SPTA1P02549 snoU109.5-201ENST00000516231 132 ntBASIC4.69□□□□□ -1.66
SPTA1P02549 C14orf105-210ENST00000534126 1030 ntAPPRIS ALT1 TSL 1 (best) BASIC4.69□□□□□ -1.66
SPTA1P02549 AC109462.2-201ENST00000558730 763 ntTSL 3 BASIC4.69□□□□□ -1.66
SPTA1P02549 AC023575.1-201ENST00000580510 358 ntBASIC4.69□□□□□ -1.66
SPTA1P02549 LINC00254-202ENST00000633813 439 ntTSL 3 BASIC4.69□□□□□ -1.66
SPTA1P02549 HEATR1-203ENST00000366582 8447 ntAPPRIS P1 TSL 5 BASIC4.69□□□□□ -1.66
SPTA1P02549 MROH2B-203ENST00000506092 3745 ntTSL 2 BASIC4.69□□□□□ -1.66
SPTA1P02549 PAK3-202ENST00000360648 2241 ntTSL 1 (best) BASIC4.69□□□□□ -1.66
SPTA1P02549 NOL8-214ENST00000535387 3390 ntAPPRIS ALT2 TSL 5 BASIC4.69□□□□□ -1.66
SPTA1P02549 CDC7-201ENST00000234626 3173 ntAPPRIS P1 TSL 1 (best) BASIC4.69□□□□□ -1.66
SPTA1P02549 AC078842.2-201ENST00000447529 1835 ntTSL 2 BASIC4.69□□□□□ -1.66
SPTA1P02549 AC006994.2-202ENST00000639259 3828 ntTSL 5 BASIC4.69□□□□□ -1.66
SPTA1P02549 SLC35F5-213ENST00000638402 1554 ntTSL 5 BASIC4.69□□□□□ -1.66
SPTA1P02549 HELZ-207ENST00000580168 6279 ntAPPRIS P1 TSL 1 (best) BASIC4.69□□□□□ -1.66
SPTA1P02549 ASAH2-202ENST00000395526 6880 ntAPPRIS P1 TSL 1 (best) BASIC4.69□□□□□ -1.66
SPTA1P02549 DCUN1D1-208ENST00000632685 3147 ntTSL 1 (best) BASIC4.69□□□□□ -1.66
SPTA1P02549 UBE2W-203ENST00000517608 8426 ntTSL 1 (best) BASIC4.68□□□□□ -1.66
SPTA1P02549 PCBP1-AS1-230ENST00000439670 2180 ntTSL 2 BASIC4.68□□□□□ -1.66
SPTA1P02549 SLC4A10-203ENST00000415876 5578 ntTSL 1 (best) BASIC4.68□□□□□ -1.66
SPTA1P02549 SNORA70F-201ENST00000384142 135 ntBASIC4.68□□□□□ -1.66
SPTA1P02549 CASKP1-201ENST00000412870 582 ntBASIC4.68□□□□□ -1.66
SPTA1P02549 ATP6V0E1P2-201ENST00000441771 245 ntBASIC4.68□□□□□ -1.66
SPTA1P02549 AL137845.2-201ENST00000444292 988 ntBASIC4.68□□□□□ -1.66
SPTA1P02549 EEF1A1P1-201ENST00000447052 739 ntBASIC4.68□□□□□ -1.66
SPTA1P02549 AC078814.2-201ENST00000552996 535 ntTSL 4 BASIC4.68□□□□□ -1.66
SPTA1P02549 OR4C13-201ENST00000555099 1029 ntAPPRIS P1 BASIC4.68□□□□□ -1.66
SPTA1P02549 AC087286.2-201ENST00000558980 660 ntTSL 3 BASIC4.68□□□□□ -1.66
SPTA1P02549 RNA5SP196-201ENST00000625967 102 ntBASIC4.68□□□□□ -1.66
SPTA1P02549 DGKH-210ENST00000628433 3449 ntTSL 2 BASIC4.68□□□□□ -1.66
SPTA1P02549 MIR99AHG-219ENST00000619222 3476 ntTSL 2 BASIC4.68□□□□□ -1.66
SPTA1P02549 MSL3P1-202ENST00000440028 1468 ntBASIC4.68□□□□□ -1.66
SPTA1P02549 SLX4IP-201ENST00000334534 6062 ntAPPRIS P1 TSL 1 (best) BASIC4.68□□□□□ -1.66
SPTA1P02549 MLIP-206ENST00000502396 3102 ntAPPRIS ALT2 TSL 2 BASIC4.68□□□□□ -1.66
SPTA1P02549 XIRP2-203ENST00000409195 12675 ntTSL 5 BASIC4.68□□□□□ -1.66
SPTA1P02549 EEF1A1P33-201ENST00000554413 1362 ntBASIC4.68□□□□□ -1.66
SPTA1P02549 ZRANB3-211ENST00000619650 2494 ntTSL 5 BASIC4.68□□□□□ -1.66
SPTA1P02549 HYAL4-201ENST00000223026 2407 ntAPPRIS P1 TSL 1 (best) BASIC4.68□□□□□ -1.66
SPTA1P02549 TLR10-204ENST00000506111 3462 ntAPPRIS P1 TSL 1 (best) BASIC4.68□□□□□ -1.66
SPTA1P02549 SIAH1-202ENST00000380006 3352 ntAPPRIS P3 BASIC4.68□□□□□ -1.66
SPTA1P02549 LRRIQ3-201ENST00000354431 2849 ntAPPRIS P2 TSL 5 BASIC4.68□□□□□ -1.66
SPTA1P02549 DSCR8-201ENST00000357704 552 ntAPPRIS P5 TSL 2 BASIC4.68□□□□□ -1.66
SPTA1P02549 LINC02020-202ENST00000421006 575 ntTSL 4 BASIC4.68□□□□□ -1.66
SPTA1P02549 AC005154.2-201ENST00000438110 379 ntBASIC4.68□□□□□ -1.66
SPTA1P02549 AP000770.1-201ENST00000444123 583 ntTSL 5 BASIC4.68□□□□□ -1.66
SPTA1P02549 FGB-207ENST00000509493 1164 ntTSL 5 BASIC4.68□□□□□ -1.66
SPTA1P02549 AC137627.1-201ENST00000545761 289 ntBASIC4.68□□□□□ -1.66
SPTA1P02549 ARL6IP1P1-201ENST00000545836 610 ntBASIC4.68□□□□□ -1.66
SPTA1P02549 NMNAT1P1-201ENST00000554095 876 ntBASIC4.68□□□□□ -1.66
SPTA1P02549 MIR3939-201ENST00000582614 106 ntBASIC4.68□□□□□ -1.66
SPTA1P02549 AL121890.2-201ENST00000617644 465 ntBASIC4.68□□□□□ -1.66
SPTA1P02549 PCBP1-AS1-278ENST00000625518 864 ntTSL 5 BASIC4.68□□□□□ -1.66
SPTA1P02549 LINC01553-203ENST00000521074 4329 ntTSL 1 (best) BASIC4.68□□□□□ -1.66
SPTA1P02549 MOB4-201ENST00000233892 3785 ntTSL 1 (best) BASIC4.68□□□□□ -1.66
SPTA1P02549 PSG7-202ENST00000446844 2227 ntAPPRIS P5 TSL 5 BASIC4.68□□□□□ -1.66
SPTA1P02549 VPS13C-204ENST00000395898 11012 ntAPPRIS ALT2 TSL 1 (best) BASIC4.68□□□□□ -1.66
SPTA1P02549 SMG1P4-204ENST00000523028 4131 ntBASIC4.68□□□□□ -1.66
Retrieved 100 of 98,524 protein–RNA pairs in 86.1 ms