Protein–RNA interactions for Protein: O95096

NKX2-2, Homeobox protein Nkx-2.2, humanhuman

Predictions only

Length 273 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NKX2-2O95096 AFP-201ENST00000226359 1914 ntTSL 5 BASIC5.11□□□□□ -1.59
NKX2-2O95096 ALKBH3-AS1-201ENST00000499194 1906 ntTSL 2 BASIC5.11□□□□□ -1.59
NKX2-2O95096 PSG7-201ENST00000406070 2025 ntAPPRIS ALT2 TSL 1 (best) BASIC5.11□□□□□ -1.59
NKX2-2O95096 MPDZ-212ENST00000538841 3186 ntTSL 2 BASIC5.11□□□□□ -1.59
NKX2-2O95096 LGALSL-202ENST00000409537 3298 ntTSL 5 BASIC5.11□□□□□ -1.59
NKX2-2O95096 CCR2-202ENST00000400888 2232 ntTSL 1 (best) BASIC5.11□□□□□ -1.59
NKX2-2O95096 PLS1-211ENST00000497002 2258 ntAPPRIS P1 TSL 1 (best) BASIC5.11□□□□□ -1.59
NKX2-2O95096 PIGK-202ENST00000370812 4596 ntAPPRIS P1 TSL 1 (best) BASIC5.11□□□□□ -1.59
NKX2-2O95096 ADGRL2-222ENST00000627151 5789 ntTSL 5 BASIC5.11□□□□□ -1.59
NKX2-2O95096 MUC17-201ENST00000306151 14247 ntAPPRIS P1 TSL 1 (best) BASIC5.11□□□□□ -1.59
NKX2-2O95096 ZNF891-201ENST00000537226 15455 ntAPPRIS P1 TSL 2 BASIC5.11□□□□□ -1.59
NKX2-2O95096 SLC12A6-216ENST00000560164 3744 ntTSL 2 BASIC5.11□□□□□ -1.59
NKX2-2O95096 AC106870.1-201ENST00000359823 200 ntTSL 3 BASIC5.11□□□□□ -1.59
NKX2-2O95096 RN7SKP145-201ENST00000363291 303 ntBASIC5.11□□□□□ -1.59
NKX2-2O95096 BCL11A-205ENST00000409351 756 ntTSL 1 (best) BASIC5.11□□□□□ -1.59
NKX2-2O95096 CYCSP11-201ENST00000436426 315 ntBASIC5.11□□□□□ -1.59
NKX2-2O95096 AL359265.1-201ENST00000440296 795 ntBASIC5.11□□□□□ -1.59
NKX2-2O95096 MED28P3-201ENST00000444288 531 ntBASIC5.11□□□□□ -1.59
NKX2-2O95096 AC092106.1-201ENST00000444291 373 ntBASIC5.11□□□□□ -1.59
NKX2-2O95096 AC013733.1-201ENST00000449835 985 ntTSL 4 BASIC5.11□□□□□ -1.59
NKX2-2O95096 FO393415.3-201ENST00000456424 375 ntTSL 3 BASIC5.11□□□□□ -1.59
NKX2-2O95096 RPS27L-205ENST00000462430 681 ntTSL 2 BASIC5.11□□□□□ -1.59
NKX2-2O95096 NUDT6-203ENST00000502270 678 ntTSL 5 BASIC5.11□□□□□ -1.59
NKX2-2O95096 CAB39P1-201ENST00000502277 460 ntBASIC5.11□□□□□ -1.59
NKX2-2O95096 PPM1AP1-201ENST00000502740 1135 ntBASIC5.11□□□□□ -1.59
NKX2-2O95096 OR5H3P-201ENST00000502817 919 ntBASIC5.11□□□□□ -1.59
NKX2-2O95096 GNPDA2-202ENST00000507534 1050 ntTSL 2 BASIC5.11□□□□□ -1.59
NKX2-2O95096 AC021192.1-201ENST00000510169 791 ntTSL 3 BASIC5.11□□□□□ -1.59
NKX2-2O95096 IMPA1P1-201ENST00000510718 842 ntBASIC5.11□□□□□ -1.59
NKX2-2O95096 SEPT10P1-201ENST00000517342 1162 ntBASIC5.11□□□□□ -1.59
NKX2-2O95096 AC097173.2-201ENST00000518701 474 ntTSL 3 BASIC5.11□□□□□ -1.59
NKX2-2O95096 MYL6-213ENST00000549017 502 ntTSL 3 BASIC5.11□□□□□ -1.59
NKX2-2O95096 LINC02416-201ENST00000550019 540 ntTSL 4 BASIC5.11□□□□□ -1.59
NKX2-2O95096 GLRXP2-201ENST00000555594 321 ntBASIC5.11□□□□□ -1.59
NKX2-2O95096 AC026992.1-201ENST00000558269 571 ntTSL 2 BASIC5.11□□□□□ -1.59
NKX2-2O95096 AC090888.3-201ENST00000558917 509 ntBASIC5.11□□□□□ -1.59
NKX2-2O95096 AC009113.2-201ENST00000563182 403 ntTSL 3 BASIC5.11□□□□□ -1.59
NKX2-2O95096 PWRN1-207ENST00000565893 818 ntTSL 3 BASIC5.11□□□□□ -1.59
NKX2-2O95096 AC109460.2-201ENST00000569974 544 ntTSL 3 BASIC5.11□□□□□ -1.59
NKX2-2O95096 AC126365.2-201ENST00000580630 379 ntBASIC5.11□□□□□ -1.59
NKX2-2O95096 AC012313.4-201ENST00000596296 495 ntTSL 3 BASIC5.11□□□□□ -1.59
NKX2-2O95096 AC012616.1-201ENST00000600294 197 ntBASIC5.11□□□□□ -1.59
NKX2-2O95096 HCG18-243ENST00000602498 327 ntTSL 3 BASIC5.11□□□□□ -1.59
NKX2-2O95096 AL359513.1-201ENST00000614364 557 ntBASIC5.11□□□□□ -1.59
NKX2-2O95096 AC011472.4-201ENST00000615848 491 ntBASIC5.11□□□□□ -1.59
NKX2-2O95096 AP2B1-222ENST00000628168 192 ntTSL 5 BASIC5.11□□□□□ -1.59
NKX2-2O95096 LINC00254-202ENST00000633813 439 ntTSL 3 BASIC5.11□□□□□ -1.59
NKX2-2O95096 ATXN2-202ENST00000389153 3854 ntAPPRIS ALT2 TSL 5 BASIC5.11□□□□□ -1.59
NKX2-2O95096 KCNJ16-202ENST00000392670 4009 ntAPPRIS P1 TSL 1 (best) BASIC5.11□□□□□ -1.59
NKX2-2O95096 TNFAIP8-207ENST00000513374 1385 ntTSL 2 BASIC5.11□□□□□ -1.59
NKX2-2O95096 AQP9-202ENST00000536493 2803 ntAPPRIS P1 TSL 1 (best) BASIC5.11□□□□□ -1.59
NKX2-2O95096 AL354733.2-209ENST00000589233 1434 ntTSL 2 BASIC5.11□□□□□ -1.59
NKX2-2O95096 MPP5-204ENST00000555925 5006 ntTSL 1 (best) BASIC5.11□□□□□ -1.59
NKX2-2O95096 EFCAB5-201ENST00000394835 5132 ntAPPRIS P2 TSL 1 (best) BASIC5.11□□□□□ -1.59
NKX2-2O95096 PSG1-202ENST00000312439 1882 ntAPPRIS ALT2 TSL 1 (best) BASIC5.11□□□□□ -1.59
NKX2-2O95096 RAPH1-207ENST00000423104 1860 ntAPPRIS ALT2 TSL 5 BASIC5.11□□□□□ -1.59
NKX2-2O95096 RAPH1-209ENST00000439222 1854 ntAPPRIS ALT2 TSL 5 BASIC5.11□□□□□ -1.59
NKX2-2O95096 AC007750.1-202ENST00000418968 4098 ntTSL 5 BASIC5.11□□□□□ -1.59
NKX2-2O95096 MPDZ-208ENST00000447879 6262 ntAPPRIS ALT2 TSL 1 (best) BASIC5.11□□□□□ -1.59
NKX2-2O95096 SPATA17-201ENST00000366933 5818 ntAPPRIS P1 TSL 1 (best) BASIC5.1□□□□□ -1.59
NKX2-2O95096 ZMAT1-201ENST00000372782 3185 ntAPPRIS P1 TSL 1 (best) BASIC5.1□□□□□ -1.59
NKX2-2O95096 AC016745.2-201ENST00000608834 3443 ntBASIC5.1□□□□□ -1.59
NKX2-2O95096 TRIQK-206ENST00000518748 3563 ntAPPRIS P1 TSL 1 (best) BASIC5.1□□□□□ -1.59
NKX2-2O95096 ESRRG-204ENST00000361525 5363 ntAPPRIS P1 TSL 5 BASIC5.1□□□□□ -1.59
NKX2-2O95096 ADGRF5-201ENST00000265417 5668 ntAPPRIS P1 TSL 1 (best) BASIC5.1□□□□□ -1.59
NKX2-2O95096 GLYAT-201ENST00000278400 1150 ntTSL 1 (best) BASIC5.1□□□□□ -1.59
NKX2-2O95096 RNU6-666P-201ENST00000363499 107 ntBASIC5.1□□□□□ -1.59
NKX2-2O95096 TNFSF4-202ENST00000367718 3429 ntTSL 1 (best) BASIC5.1□□□□□ -1.59
NKX2-2O95096 CD84-205ENST00000368051 965 ntAPPRIS ALT2 TSL 1 (best) BASIC5.1□□□□□ -1.59
NKX2-2O95096 AC093155.3-201ENST00000370548 2013 ntAPPRIS P1 TSL 2 BASIC5.1□□□□□ -1.59
NKX2-2O95096 SSX1-201ENST00000376919 1298 ntAPPRIS P1 TSL 1 (best) BASIC5.1□□□□□ -1.59
NKX2-2O95096 SMARCA2-207ENST00000382186 955 ntTSL 3 BASIC5.1□□□□□ -1.59
NKX2-2O95096 SNORD56.6-201ENST00000384569 71 ntBASIC5.1□□□□□ -1.59
NKX2-2O95096 ALB-202ENST00000401494 1659 ntTSL 5 BASIC5.1□□□□□ -1.59
NKX2-2O95096 RNA5SP498-201ENST00000411342 120 ntBASIC5.1□□□□□ -1.59
NKX2-2O95096 AL355300.1-201ENST00000412439 187 ntTSL 3 BASIC5.1□□□□□ -1.59
NKX2-2O95096 AL024507.1-201ENST00000412741 274 ntBASIC5.1□□□□□ -1.59
NKX2-2O95096 AL159990.1-201ENST00000415119 337 ntTSL 3 BASIC5.1□□□□□ -1.59
NKX2-2O95096 AC092687.1-201ENST00000418835 389 ntTSL 3 BASIC5.1□□□□□ -1.59
NKX2-2O95096 ITGA9-AS1-202ENST00000420870 581 ntTSL 4 BASIC5.1□□□□□ -1.59
NKX2-2O95096 SERPINA9-204ENST00000424550 1462 ntTSL 1 (best) BASIC5.1□□□□□ -1.59
NKX2-2O95096 ALG13-AS1-201ENST00000430794 195 ntTSL 5 BASIC5.1□□□□□ -1.59
NKX2-2O95096 AC106053.1-201ENST00000431697 368 ntTSL 3 BASIC5.1□□□□□ -1.59
NKX2-2O95096 MTCO1P43-201ENST00000431831 488 ntBASIC5.1□□□□□ -1.59
NKX2-2O95096 AL159990.2-201ENST00000436491 337 ntTSL 3 BASIC5.1□□□□□ -1.59
NKX2-2O95096 MTND2P40-201ENST00000436718 841 ntBASIC5.1□□□□□ -1.59
NKX2-2O95096 AL121917.1-201ENST00000441270 893 ntTSL 5 BASIC5.1□□□□□ -1.59
NKX2-2O95096 GSTM2-206ENST00000442650 1478 ntTSL 5 BASIC5.1□□□□□ -1.59
NKX2-2O95096 AC019185.1-201ENST00000442718 389 ntBASIC5.1□□□□□ -1.59
NKX2-2O95096 AC007655.1-201ENST00000444324 357 ntTSL 3 BASIC5.1□□□□□ -1.59
NKX2-2O95096 RPL6P5-201ENST00000445678 828 ntBASIC5.1□□□□□ -1.59
NKX2-2O95096 HMGN1P36-201ENST00000446623 298 ntBASIC5.1□□□□□ -1.59
NKX2-2O95096 CYCSP42-201ENST00000450823 238 ntBASIC5.1□□□□□ -1.59
NKX2-2O95096 HMGB1P26-201ENST00000452520 628 ntBASIC5.1□□□□□ -1.59
NKX2-2O95096 AC006148.2-201ENST00000467017 650 ntTSL 2 BASIC5.1□□□□□ -1.59
NKX2-2O95096 AC025566.1-201ENST00000477153 490 ntTSL 3 BASIC5.1□□□□□ -1.59
NKX2-2O95096 GPX8-208ENST00000515370 1036 ntTSL 2 BASIC5.1□□□□□ -1.59
NKX2-2O95096 AC140125.1-201ENST00000515739 684 ntTSL 5 BASIC5.1□□□□□ -1.59
NKX2-2O95096 AC009623.1-201ENST00000517964 1131 ntTSL 2 BASIC5.1□□□□□ -1.59
NKX2-2O95096 AC013644.1-202ENST00000523166 499 ntTSL 2 BASIC5.1□□□□□ -1.59
Retrieved 100 of 98,524 protein–RNA pairs in 77.6 ms