Protein–RNA interactions for Protein: O60663

LMX1B, LIM homeobox transcription factor 1-beta, humanhuman

Predictions only

Length 402 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LMX1BO60663 AC062021.1-201ENST00000429008 557 ntTSL 4 BASIC4.85□□□□□ -1.63
LMX1BO60663 AL022331.1-201ENST00000429025 477 ntBASIC4.85□□□□□ -1.63
LMX1BO60663 AC004990.1-201ENST00000431722 564 ntTSL 4 BASIC4.85□□□□□ -1.63
LMX1BO60663 CFL1P1-202ENST00000432948 411 ntBASIC4.85□□□□□ -1.63
LMX1BO60663 AC013410.1-201ENST00000436223 1232 ntBASIC4.85□□□□□ -1.63
LMX1BO60663 GAPDHP58-201ENST00000438477 1006 ntBASIC4.85□□□□□ -1.63
LMX1BO60663 IKZF3-212ENST00000439016 1246 ntTSL 5 BASIC4.85□□□□□ -1.63
LMX1BO60663 FOCAD-AS1-201ENST00000439876 359 ntTSL 2 BASIC4.85□□□□□ -1.63
LMX1BO60663 LINC01941-201ENST00000455174 624 ntTSL 2 BASIC4.85□□□□□ -1.63
LMX1BO60663 RN7SL184P-201ENST00000488308 297 ntBASIC4.85□□□□□ -1.63
LMX1BO60663 AC012629.1-201ENST00000503953 342 ntTSL 3 BASIC4.85□□□□□ -1.63
LMX1BO60663 HOMER1-204ENST00000508576 815 ntTSL 1 (best) BASIC4.85□□□□□ -1.63
LMX1BO60663 LINC02223-202ENST00000511596 578 ntTSL 5 BASIC4.85□□□□□ -1.63
LMX1BO60663 RNU6-491P-201ENST00000516099 110 ntBASIC4.85□□□□□ -1.63
LMX1BO60663 SEPT10P1-201ENST00000517342 1162 ntBASIC4.85□□□□□ -1.63
LMX1BO60663 AP006245.2-201ENST00000522004 300 ntBASIC4.85□□□□□ -1.63
LMX1BO60663 POLR2K-203ENST00000522439 543 ntTSL 2 BASIC4.85□□□□□ -1.63
LMX1BO60663 OR5AM1P-201ENST00000532136 1032 ntBASIC4.85□□□□□ -1.63
LMX1BO60663 GPRC5D-AS1-205ENST00000540198 404 ntTSL 5 BASIC4.85□□□□□ -1.63
LMX1BO60663 KLRK1-204ENST00000540818 951 ntAPPRIS P1 TSL 1 (best) BASIC4.85□□□□□ -1.63
LMX1BO60663 AC084200.1-201ENST00000547370 547 ntTSL 4 BASIC4.85□□□□□ -1.63
LMX1BO60663 AC074029.2-201ENST00000551045 634 ntBASIC4.85□□□□□ -1.63
LMX1BO60663 FRMD6-AS2-201ENST00000556617 548 ntTSL 4 BASIC4.85□□□□□ -1.63
LMX1BO60663 AC026992.1-201ENST00000558269 571 ntTSL 2 BASIC4.85□□□□□ -1.63
LMX1BO60663 AC093510.2-201ENST00000562820 896 ntBASIC4.85□□□□□ -1.63
LMX1BO60663 ARPP19-204ENST00000563277 955 ntTSL 2 BASIC4.85□□□□□ -1.63
LMX1BO60663 AC090618.1-201ENST00000571972 585 ntTSL 2 BASIC4.85□□□□□ -1.63
LMX1BO60663 AC239809.3-206ENST00000596091 741 ntTSL 5 BASIC4.85□□□□□ -1.63
LMX1BO60663 DARS-AS1-217ENST00000599279 544 ntTSL 5 BASIC4.85□□□□□ -1.63
LMX1BO60663 MTATP6P2-201ENST00000603319 678 ntBASIC4.85□□□□□ -1.63
LMX1BO60663 AL136295.6-201ENST00000610486 658 ntBASIC4.85□□□□□ -1.63
LMX1BO60663 DARS-AS1-225ENST00000615163 824 ntTSL 5 BASIC4.85□□□□□ -1.63
LMX1BO60663 AC090607.5-201ENST00000615692 224 ntBASIC4.85□□□□□ -1.63
LMX1BO60663 CU639417.4-201ENST00000623928 207 ntBASIC4.85□□□□□ -1.63
LMX1BO60663 AP003499.2-201ENST00000624100 483 ntBASIC4.85□□□□□ -1.63
LMX1BO60663 AC009039.2-201ENST00000624524 529 ntBASIC4.85□□□□□ -1.63
LMX1BO60663 AC079097.1-201ENST00000512187 1399 ntBASIC4.85□□□□□ -1.63
LMX1BO60663 CASC19-248ENST00000641674 1356 ntBASIC4.85□□□□□ -1.63
LMX1BO60663 CARD6-201ENST00000254691 4221 ntAPPRIS P1 TSL 1 (best) BASIC4.85□□□□□ -1.63
LMX1BO60663 DSPP-201ENST00000282478 4281 ntAPPRIS P1 TSL 5 BASIC4.85□□□□□ -1.63
LMX1BO60663 CD164-207ENST00000504373 1402 ntTSL 1 (best) BASIC4.85□□□□□ -1.63
LMX1BO60663 IFT52-202ENST00000373039 1599 ntAPPRIS P1 TSL 5 BASIC4.85□□□□□ -1.63
LMX1BO60663 VNN2-206ENST00000525270 1608 ntAPPRIS ALT2 TSL 2 BASIC4.85□□□□□ -1.63
LMX1BO60663 PSMA8-205ENST00000612461 1619 ntTSL 5 BASIC4.85□□□□□ -1.63
LMX1BO60663 FCRL2-203ENST00000368181 1669 ntTSL 1 (best) BASIC4.85□□□□□ -1.63
LMX1BO60663 CYP3A7-CYP3A51P-202ENST00000620220 1704 ntAPPRIS P1 TSL 1 (best) BASIC4.85□□□□□ -1.63
LMX1BO60663 RBMX-203ENST00000431446 2004 ntTSL 2 BASIC4.85□□□□□ -1.63
LMX1BO60663 MRE11P1-201ENST00000464884 2127 ntBASIC4.85□□□□□ -1.63
LMX1BO60663 ZNF571-203ENST00000451802 2265 ntAPPRIS P1 TSL 1 (best) BASIC4.85□□□□□ -1.63
LMX1BO60663 ZNF701-202ENST00000391785 2634 ntAPPRIS P3 TSL 1 (best) BASIC4.85□□□□□ -1.63
LMX1BO60663 ADAM29-202ENST00000404450 3171 ntAPPRIS P1 TSL 1 (best) BASIC4.85□□□□□ -1.63
LMX1BO60663 OR10G4-203ENST00000641722 3301 ntAPPRIS P1 BASIC4.85□□□□□ -1.63
LMX1BO60663 OR56A4-202ENST00000641156 3768 ntAPPRIS P1 BASIC4.85□□□□□ -1.63
LMX1BO60663 AC083899.1-201ENST00000454465 3819 ntBASIC4.85□□□□□ -1.63
LMX1BO60663 SMC2-AS1-201ENST00000603487 7020 ntTSL 2 BASIC4.84□□□□□ -1.63
LMX1BO60663 PLCB1-211ENST00000617005 6458 ntTSL 5 BASIC4.84□□□□□ -1.63
LMX1BO60663 RNF20-202ENST00000389120 3940 ntAPPRIS P1 TSL 1 (best) BASIC4.84□□□□□ -1.63
LMX1BO60663 SLC12A6-216ENST00000560164 3744 ntTSL 2 BASIC4.84□□□□□ -1.63
LMX1BO60663 CPNE4-214ENST00000617767 3556 ntTSL 2 BASIC4.84□□□□□ -1.63
LMX1BO60663 SLFN5-201ENST00000299977 10591 ntAPPRIS P1 TSL 1 (best) BASIC4.84□□□□□ -1.63
LMX1BO60663 OPRM1-217ENST00000522236 2459 ntTSL 1 (best) BASIC4.84□□□□□ -1.63
LMX1BO60663 ADAMDEC1-201ENST00000256412 2348 ntAPPRIS P3 TSL 1 (best) BASIC4.84□□□□□ -1.63
LMX1BO60663 PSG7-201ENST00000406070 2025 ntAPPRIS ALT2 TSL 1 (best) BASIC4.84□□□□□ -1.63
LMX1BO60663 CDC16-202ENST00000252458 1991 ntTSL 1 (best) BASIC4.84□□□□□ -1.63
LMX1BO60663 AL355306.2-206ENST00000635233 1903 ntTSL 5 BASIC4.84□□□□□ -1.63
LMX1BO60663 C4BPAP1-201ENST00000415474 1893 ntBASIC4.84□□□□□ -1.63
LMX1BO60663 CPA3-201ENST00000296046 1795 ntAPPRIS P1 TSL 1 (best) BASIC4.84□□□□□ -1.63
LMX1BO60663 CYP2C8-210ENST00000535898 1799 ntTSL 2 BASIC4.84□□□□□ -1.63
LMX1BO60663 AL132656.3-201ENST00000606384 1595 ntBASIC4.84□□□□□ -1.63
LMX1BO60663 AC007491.1-202ENST00000637961 1576 ntTSL 5 BASIC4.84□□□□□ -1.63
LMX1BO60663 AL590763.1-201ENST00000398297 1545 ntBASIC4.84□□□□□ -1.63
LMX1BO60663 AC106754.1-201ENST00000562632 1513 ntBASIC4.84□□□□□ -1.63
LMX1BO60663 RLN1-201ENST00000223862 967 ntAPPRIS P1 TSL 1 (best) BASIC4.84□□□□□ -1.63
LMX1BO60663 RNU6-792P-201ENST00000363490 107 ntBASIC4.84□□□□□ -1.63
LMX1BO60663 MIR1286-201ENST00000408112 78 ntBASIC4.84□□□□□ -1.63
LMX1BO60663 NT5C3A-206ENST00000409787 840 ntTSL 2 BASIC4.84□□□□□ -1.63
LMX1BO60663 MTCO2P8-201ENST00000412213 658 ntBASIC4.84□□□□□ -1.63
LMX1BO60663 BX470102.1-201ENST00000420695 531 ntTSL 2 BASIC4.84□□□□□ -1.63
LMX1BO60663 AC018832.1-201ENST00000428171 566 ntTSL 4 BASIC4.84□□□□□ -1.63
LMX1BO60663 AL450472.1-201ENST00000439434 405 ntTSL 2 BASIC4.84□□□□□ -1.63
LMX1BO60663 AC073465.2-201ENST00000440938 498 ntBASIC4.84□□□□□ -1.63
LMX1BO60663 AC024597.1-201ENST00000442753 706 ntTSL 5 BASIC4.84□□□□□ -1.63
LMX1BO60663 AZGP1P2-201ENST00000454506 345 ntBASIC4.84□□□□□ -1.63
LMX1BO60663 RN7SL30P-201ENST00000488416 306 ntBASIC4.84□□□□□ -1.63
LMX1BO60663 AC093801.1-201ENST00000504017 307 ntTSL 2 BASIC4.84□□□□□ -1.63
LMX1BO60663 AC105420.1-201ENST00000504389 582 ntBASIC4.84□□□□□ -1.63
LMX1BO60663 LINC01332-201ENST00000506612 502 ntTSL 4 BASIC4.84□□□□□ -1.63
LMX1BO60663 LINC01017-201ENST00000508823 768 ntTSL 3 BASIC4.84□□□□□ -1.63
LMX1BO60663 AC034238.3-201ENST00000512349 591 ntTSL 4 BASIC4.84□□□□□ -1.63
LMX1BO60663 AC093763.1-201ENST00000512464 699 ntTSL 3 BASIC4.84□□□□□ -1.63
LMX1BO60663 AC106744.2-201ENST00000513955 898 ntTSL 5 BASIC4.84□□□□□ -1.63
LMX1BO60663 AC079064.1-201ENST00000528365 362 ntBASIC4.84□□□□□ -1.63
LMX1BO60663 HMGB1P42-201ENST00000532126 553 ntBASIC4.84□□□□□ -1.63
LMX1BO60663 AP002754.2-201ENST00000542121 462 ntTSL 5 BASIC4.84□□□□□ -1.63
LMX1BO60663 ZKSCAN7P1-201ENST00000543668 673 ntBASIC4.84□□□□□ -1.63
LMX1BO60663 C8orf59-206ENST00000545322 491 ntTSL 3 BASIC4.84□□□□□ -1.63
LMX1BO60663 AC008149.1-201ENST00000551844 525 ntTSL 4 BASIC4.84□□□□□ -1.63
LMX1BO60663 AC004825.1-201ENST00000555068 586 ntBASIC4.84□□□□□ -1.63
LMX1BO60663 AC022166.2-201ENST00000566030 536 ntTSL 4 BASIC4.84□□□□□ -1.63
LMX1BO60663 AC009019.1-203ENST00000568603 515 ntTSL 5 BASIC4.84□□□□□ -1.63
Retrieved 100 of 98,524 protein–RNA pairs in 70.2 ms