Protein–RNA interactions for Protein: H3BSU7

TMX2-CTNND1, TMX2-CTNND1 readthrough (NMD candidate), humanhuman

Predictions only

Length 103 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMX2-CTNND1H3BSU7 HHLA2-210ENST00000491820 1439 ntAPPRIS ALT2 TSL 1 (best) BASIC5.11□□□□□ -1.59
TMX2-CTNND1H3BSU7 ZFP14-201ENST00000270001 7489 ntAPPRIS P1 TSL 1 (best) BASIC5.11□□□□□ -1.59
TMX2-CTNND1H3BSU7 RAPH1-207ENST00000423104 1860 ntAPPRIS ALT2 TSL 5 BASIC5.11□□□□□ -1.59
TMX2-CTNND1H3BSU7 PATE4-201ENST00000457514 1983 ntAPPRIS P2 TSL 2 BASIC5.11□□□□□ -1.59
TMX2-CTNND1H3BSU7 DUSP19-202ENST00000354221 5176 ntAPPRIS P1 TSL 1 (best) BASIC5.1□□□□□ -1.59
TMX2-CTNND1H3BSU7 TRGC1-201ENST00000443402 2730 ntAPPRIS P1 BASIC5.1□□□□□ -1.59
TMX2-CTNND1H3BSU7 PLEKHG7-201ENST00000344636 3868 ntTSL 5 BASIC5.1□□□□□ -1.59
TMX2-CTNND1H3BSU7 MUC2-202ENST00000613187 4845 ntBASIC5.1□□□□□ -1.59
TMX2-CTNND1H3BSU7 CACNB4-243ENST00000637217 8188 ntTSL 5 BASIC5.1□□□□□ -1.59
TMX2-CTNND1H3BSU7 KAT6B-201ENST00000287239 8287 ntAPPRIS P3 TSL 1 (best) BASIC5.1□□□□□ -1.59
TMX2-CTNND1H3BSU7 HIST1H2BD-201ENST00000289316 789 ntAPPRIS P1 TSL 1 (best) BASIC5.1□□□□□ -1.59
TMX2-CTNND1H3BSU7 AC115220.1-201ENST00000330020 1453 ntAPPRIS P1 TSL 3 BASIC5.1□□□□□ -1.59
TMX2-CTNND1H3BSU7 MRPL35-202ENST00000337109 3727 ntAPPRIS P4 TSL 1 (best) BASIC5.1□□□□□ -1.59
TMX2-CTNND1H3BSU7 MAX-203ENST00000341653 330 ntTSL 2 BASIC5.1□□□□□ -1.59
TMX2-CTNND1H3BSU7 C2orf66-201ENST00000342506 1669 ntAPPRIS P1 TSL 1 (best) BASIC5.1□□□□□ -1.59
TMX2-CTNND1H3BSU7 AC007618.1-201ENST00000366455 732 ntBASIC5.1□□□□□ -1.59
TMX2-CTNND1H3BSU7 UBBP2-201ENST00000376781 231 ntBASIC5.1□□□□□ -1.59
TMX2-CTNND1H3BSU7 TRBV24-1-201ENST00000390397 381 ntAPPRIS P1 BASIC5.1□□□□□ -1.59
TMX2-CTNND1H3BSU7 SEPT7P2-202ENST00000398921 823 ntBASIC5.1□□□□□ -1.59
TMX2-CTNND1H3BSU7 CXCL8-202ENST00000401931 700 ntAPPRIS ALT1 TSL 1 (best) BASIC5.1□□□□□ -1.59
TMX2-CTNND1H3BSU7 RPL12P9-201ENST00000412942 488 ntBASIC5.1□□□□□ -1.59
TMX2-CTNND1H3BSU7 TCP1P3-201ENST00000414406 1498 ntBASIC5.1□□□□□ -1.59
TMX2-CTNND1H3BSU7 DDX39BP1-205ENST00000422507 192 ntBASIC5.1□□□□□ -1.59
TMX2-CTNND1H3BSU7 NIPA2P1-201ENST00000426223 976 ntBASIC5.1□□□□□ -1.59
TMX2-CTNND1H3BSU7 AL354863.1-202ENST00000431695 494 ntTSL 5 BASIC5.1□□□□□ -1.59
TMX2-CTNND1H3BSU7 AC069277.1-205ENST00000432743 630 ntTSL 5 BASIC5.1□□□□□ -1.59
TMX2-CTNND1H3BSU7 LINC01361-202ENST00000452834 1526 ntTSL 1 (best) BASIC5.1□□□□□ -1.59
TMX2-CTNND1H3BSU7 AZGP1P2-201ENST00000454506 345 ntBASIC5.1□□□□□ -1.59
TMX2-CTNND1H3BSU7 PROS2P-201ENST00000474651 1951 ntBASIC5.1□□□□□ -1.59
TMX2-CTNND1H3BSU7 AC090114.3-201ENST00000479267 829 ntBASIC5.1□□□□□ -1.59
TMX2-CTNND1H3BSU7 AC000372.1-201ENST00000488818 646 ntTSL 2 BASIC5.1□□□□□ -1.59
TMX2-CTNND1H3BSU7 AC069304.1-201ENST00000491593 704 ntBASIC5.1□□□□□ -1.59
TMX2-CTNND1H3BSU7 DUBR-205ENST00000495228 411 ntTSL 2 BASIC5.1□□□□□ -1.59
TMX2-CTNND1H3BSU7 AC138965.1-202ENST00000502354 547 ntTSL 5 BASIC5.1□□□□□ -1.59
TMX2-CTNND1H3BSU7 AC140125.3-201ENST00000505248 547 ntTSL 4 BASIC5.1□□□□□ -1.59
TMX2-CTNND1H3BSU7 LINC02383-201ENST00000508563 582 ntTSL 3 BASIC5.1□□□□□ -1.59
TMX2-CTNND1H3BSU7 ARL6IP1P3-201ENST00000524544 560 ntBASIC5.1□□□□□ -1.59
TMX2-CTNND1H3BSU7 TDO2-208ENST00000536354 1701 ntAPPRIS P1 TSL 1 (best) BASIC5.1□□□□□ -1.59
TMX2-CTNND1H3BSU7 AC008149.1-201ENST00000551844 525 ntTSL 4 BASIC5.1□□□□□ -1.59
TMX2-CTNND1H3BSU7 MGAT4C-206ENST00000552435 550 ntTSL 4 BASIC5.1□□□□□ -1.59
TMX2-CTNND1H3BSU7 OR11J2P-201ENST00000555298 907 ntBASIC5.1□□□□□ -1.59
TMX2-CTNND1H3BSU7 AL390726.5-202ENST00000564800 256 ntBASIC5.1□□□□□ -1.59
TMX2-CTNND1H3BSU7 AC046158.2-201ENST00000568764 707 ntTSL 3 BASIC5.1□□□□□ -1.59
TMX2-CTNND1H3BSU7 AC127024.5-201ENST00000580085 462 ntBASIC5.1□□□□□ -1.59
TMX2-CTNND1H3BSU7 MIR4480-201ENST00000582492 71 ntBASIC5.1□□□□□ -1.59
TMX2-CTNND1H3BSU7 AC243960.1-203ENST00000595395 599 ntTSL 4 BASIC5.1□□□□□ -1.59
TMX2-CTNND1H3BSU7 AC010531.5-201ENST00000602779 450 ntTSL 3 BASIC5.1□□□□□ -1.59
TMX2-CTNND1H3BSU7 Z95327.3-201ENST00000610385 572 ntBASIC5.1□□□□□ -1.59
TMX2-CTNND1H3BSU7 AC079906.1-201ENST00000621214 815 ntTSL 3 BASIC5.1□□□□□ -1.59
TMX2-CTNND1H3BSU7 AC073869.7-201ENST00000640874 297 ntBASIC5.1□□□□□ -1.59
TMX2-CTNND1H3BSU7 AC073869.8-201ENST00000641806 335 ntBASIC5.1□□□□□ -1.59
TMX2-CTNND1H3BSU7 DOCK9-207ENST00000442173 7643 ntAPPRIS ALT2 TSL 5 BASIC5.1□□□□□ -1.59
TMX2-CTNND1H3BSU7 MBNL1-203ENST00000324196 5225 ntTSL 5 BASIC5.1□□□□□ -1.59
TMX2-CTNND1H3BSU7 PCDH11X-202ENST00000361655 4126 ntAPPRIS ALT2 TSL 1 (best) BASIC5.1□□□□□ -1.59
TMX2-CTNND1H3BSU7 ZBTB38-220ENST00000514251 7683 ntAPPRIS P1 TSL 2 BASIC5.1□□□□□ -1.59
TMX2-CTNND1H3BSU7 EPHA4-202ENST00000409854 3454 ntTSL 1 (best) BASIC5.1□□□□□ -1.59
TMX2-CTNND1H3BSU7 NPSR1-AS1-202ENST00000419766 4821 ntTSL 1 (best) BASIC5.09□□□□□ -1.59
TMX2-CTNND1H3BSU7 NCOA1-206ENST00000407230 4745 ntTSL 1 (best) BASIC5.09□□□□□ -1.59
TMX2-CTNND1H3BSU7 ZNF678-201ENST00000343776 8556 ntAPPRIS P1 TSL 1 (best) BASIC5.09□□□□□ -1.59
TMX2-CTNND1H3BSU7 ERP27-201ENST00000266397 2096 ntAPPRIS P1 TSL 1 (best) BASIC5.09□□□□□ -1.59
TMX2-CTNND1H3BSU7 MLIP-213ENST00000514921 5743 ntAPPRIS ALT2 TSL 1 (best) BASIC5.09□□□□□ -1.59
TMX2-CTNND1H3BSU7 AL158066.1-201ENST00000451298 3796 ntTSL 2 BASIC5.09□□□□□ -1.59
TMX2-CTNND1H3BSU7 OSGEPL1-201ENST00000264151 1885 ntAPPRIS P1 TSL 1 (best) BASIC5.09□□□□□ -1.59
TMX2-CTNND1H3BSU7 DLEU7-AS1-201ENST00000413510 1806 ntTSL 1 (best) BASIC5.09□□□□□ -1.59
TMX2-CTNND1H3BSU7 SLC16A9-201ENST00000395347 3646 ntAPPRIS P1 TSL 2 BASIC5.09□□□□□ -1.59
TMX2-CTNND1H3BSU7 ATPAF1-212ENST00000542495 1779 ntTSL 2 BASIC5.09□□□□□ -1.59
TMX2-CTNND1H3BSU7 AC100778.3-201ENST00000580060 1750 ntBASIC5.09□□□□□ -1.59
TMX2-CTNND1H3BSU7 AC000374.1-201ENST00000434698 1745 ntBASIC5.09□□□□□ -1.59
TMX2-CTNND1H3BSU7 AL022393.1-201ENST00000625142 1677 ntBASIC5.09□□□□□ -1.59
TMX2-CTNND1H3BSU7 IREB2-201ENST00000258886 6354 ntAPPRIS P1 TSL 1 (best) BASIC5.09□□□□□ -1.59
TMX2-CTNND1H3BSU7 PANDAR-201ENST00000629595 1506 ntBASIC5.09□□□□□ -1.59
TMX2-CTNND1H3BSU7 DYNC2H1-201ENST00000334267 2984 ntTSL 1 (best) BASIC5.09□□□□□ -1.59
TMX2-CTNND1H3BSU7 ERBIN-208ENST00000506030 4386 ntTSL 1 (best) BASIC5.09□□□□□ -1.59
TMX2-CTNND1H3BSU7 AC079097.1-201ENST00000512187 1399 ntBASIC5.09□□□□□ -1.59
TMX2-CTNND1H3BSU7 SPATA42-201ENST00000369989 535 ntTSL 1 (best) BASIC5.09□□□□□ -1.59
TMX2-CTNND1H3BSU7 TAS2R31-201ENST00000390675 1021 ntAPPRIS P1 BASIC5.09□□□□□ -1.59
TMX2-CTNND1H3BSU7 LINC01291-202ENST00000418204 441 ntTSL 5 BASIC5.09□□□□□ -1.59
TMX2-CTNND1H3BSU7 FLJ27354-202ENST00000443562 770 ntTSL 3 BASIC5.09□□□□□ -1.59
TMX2-CTNND1H3BSU7 AP001439.1-201ENST00000455275 392 ntTSL 2 BASIC5.09□□□□□ -1.59
TMX2-CTNND1H3BSU7 AC108161.1-201ENST00000461060 402 ntBASIC5.09□□□□□ -1.59
TMX2-CTNND1H3BSU7 DAP3-209ENST00000465375 729 ntTSL 2 BASIC5.09□□□□□ -1.59
TMX2-CTNND1H3BSU7 LINC02429-202ENST00000513836 694 ntTSL 3 BASIC5.09□□□□□ -1.59
TMX2-CTNND1H3BSU7 RNA5SP228-201ENST00000516232 133 ntBASIC5.09□□□□□ -1.59
TMX2-CTNND1H3BSU7 SDCBP-207ENST00000520168 1097 ntTSL 2 BASIC5.09□□□□□ -1.59
TMX2-CTNND1H3BSU7 HIGD1AP5-201ENST00000529959 259 ntBASIC5.09□□□□□ -1.59
TMX2-CTNND1H3BSU7 AC027369.5-201ENST00000533838 755 ntBASIC5.09□□□□□ -1.59
TMX2-CTNND1H3BSU7 AC134349.2-201ENST00000535136 910 ntBASIC5.09□□□□□ -1.59
TMX2-CTNND1H3BSU7 AC025423.4-201ENST00000553141 785 ntTSL 3 BASIC5.09□□□□□ -1.59
TMX2-CTNND1H3BSU7 AC091117.1-201ENST00000560967 426 ntTSL 5 BASIC5.09□□□□□ -1.59
TMX2-CTNND1H3BSU7 MTCYBP13-201ENST00000578634 1093 ntBASIC5.09□□□□□ -1.59
TMX2-CTNND1H3BSU7 MIR3936-201ENST00000584304 110 ntBASIC5.09□□□□□ -1.59
TMX2-CTNND1H3BSU7 MIR4527HG-203ENST00000600127 704 ntTSL 5 BASIC5.09□□□□□ -1.59
TMX2-CTNND1H3BSU7 ERVK-28-203ENST00000600419 457 ntTSL 1 (best) BASIC5.09□□□□□ -1.59
TMX2-CTNND1H3BSU7 AC008555.3-201ENST00000603717 442 ntTSL 3 BASIC5.09□□□□□ -1.59
TMX2-CTNND1H3BSU7 AC091932.2-201ENST00000623014 291 ntBASIC5.09□□□□□ -1.59
TMX2-CTNND1H3BSU7 TEX41-254ENST00000626394 423 ntTSL 5 BASIC5.09□□□□□ -1.59
TMX2-CTNND1H3BSU7 LEUTX-202ENST00000638280 667 ntAPPRIS P1 TSL 3 BASIC5.09□□□□□ -1.59
TMX2-CTNND1H3BSU7 INTS6P1-201ENST00000504674 2530 ntBASIC5.09□□□□□ -1.59
TMX2-CTNND1H3BSU7 KBTBD8-201ENST00000417314 4680 ntAPPRIS P1 TSL 2 BASIC5.09□□□□□ -1.59
TMX2-CTNND1H3BSU7 LINC01748-204ENST00000635048 5678 ntTSL 5 BASIC5.09□□□□□ -1.59
Retrieved 100 of 98,524 protein–RNA pairs in 77 ms