Protein–RNA interactions for Protein: A6XGL0

YJEFN3, YjeF N-terminal domain-containing protein 3, humanhuman

Predictions only

Length 299 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
YJEFN3A6XGL0 AC090510.2-201ENST00000617465 629 ntBASIC5.31□□□□□ -1.56
YJEFN3A6XGL0 BBX-201ENST00000325805 3517 ntAPPRIS ALT2 TSL 1 (best) BASIC5.31□□□□□ -1.56
YJEFN3A6XGL0 SLC28A3-201ENST00000376238 4887 ntAPPRIS P1 TSL 1 (best) BASIC5.31□□□□□ -1.56
YJEFN3A6XGL0 SGO1-202ENST00000306698 1531 ntTSL 1 (best) BASIC5.31□□□□□ -1.56
YJEFN3A6XGL0 ZNF410-211ENST00000555044 2601 ntAPPRIS P1 TSL 1 (best) BASIC5.31□□□□□ -1.56
YJEFN3A6XGL0 PWRN2-202ENST00000567246 4295 ntTSL 1 (best) BASIC5.31□□□□□ -1.56
YJEFN3A6XGL0 FOXP2-204ENST00000390668 1472 ntTSL 1 (best) BASIC5.31□□□□□ -1.56
YJEFN3A6XGL0 AC011604.2-201ENST00000381541 2268 ntAPPRIS ALT2 TSL 2 BASIC5.31□□□□□ -1.56
YJEFN3A6XGL0 AL157938.3-201ENST00000502188 3084 ntTSL 4 BASIC5.31□□□□□ -1.56
YJEFN3A6XGL0 DST-220ENST00000518935 3547 ntTSL 1 (best) BASIC5.31□□□□□ -1.56
YJEFN3A6XGL0 GEN1-202ENST00000381254 6367 ntAPPRIS P1 TSL 5 BASIC5.31□□□□□ -1.56
YJEFN3A6XGL0 PCAT19-201ENST00000588495 3472 ntTSL 1 (best) BASIC5.31□□□□□ -1.56
YJEFN3A6XGL0 NRG1-220ENST00000539990 2401 ntTSL 2 BASIC5.31□□□□□ -1.56
YJEFN3A6XGL0 R3HCC1L-202ENST00000314594 3198 ntAPPRIS P1 TSL 5 BASIC5.3□□□□□ -1.56
YJEFN3A6XGL0 VDAC3-201ENST00000022615 1355 ntAPPRIS P3 TSL 1 (best) BASIC5.3□□□□□ -1.56
YJEFN3A6XGL0 EEF1A1P36-201ENST00000427807 1351 ntBASIC5.3□□□□□ -1.56
YJEFN3A6XGL0 AC007342.9-201ENST00000623877 1385 ntBASIC5.3□□□□□ -1.56
YJEFN3A6XGL0 SCN1A-209ENST00000635750 8299 ntAPPRIS P3 TSL 5 BASIC5.3□□□□□ -1.56
YJEFN3A6XGL0 OR8J3-204ENST00000642058 3806 ntAPPRIS P1 BASIC5.3□□□□□ -1.56
YJEFN3A6XGL0 HEMGN-202ENST00000616898 2305 ntAPPRIS P1 TSL 1 (best) BASIC5.3□□□□□ -1.56
YJEFN3A6XGL0 AP000808.1-201ENST00000512200 3252 ntTSL 2 BASIC5.3□□□□□ -1.56
YJEFN3A6XGL0 MTX3-204ENST00000617335 6155 ntTSL 2 BASIC5.3□□□□□ -1.56
YJEFN3A6XGL0 LINC01923-203ENST00000456248 2528 ntTSL 2 BASIC5.3□□□□□ -1.56
YJEFN3A6XGL0 ADAMDEC1-204ENST00000522298 2044 ntAPPRIS ALT2 TSL 2 BASIC5.3□□□□□ -1.56
YJEFN3A6XGL0 ZNF780A-205ENST00000594395 2044 ntAPPRIS ALT2 TSL 2 BASIC5.3□□□□□ -1.56
YJEFN3A6XGL0 ABI1-210ENST00000376170 3362 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
YJEFN3A6XGL0 SNORA58B-201ENST00000364259 136 ntBASIC5.3□□□□□ -1.56
YJEFN3A6XGL0 AC007618.1-201ENST00000366455 732 ntBASIC5.3□□□□□ -1.56
YJEFN3A6XGL0 AC007068.1-201ENST00000396690 844 ntBASIC5.3□□□□□ -1.56
YJEFN3A6XGL0 U3.32-201ENST00000408116 212 ntBASIC5.3□□□□□ -1.56
YJEFN3A6XGL0 SNORA77-201ENST00000408716 125 ntBASIC5.3□□□□□ -1.56
YJEFN3A6XGL0 COX5BP7-201ENST00000414780 274 ntBASIC5.3□□□□□ -1.56
YJEFN3A6XGL0 AL606970.4-201ENST00000424343 455 ntTSL 2 BASIC5.3□□□□□ -1.56
YJEFN3A6XGL0 MAGI2-AS1-201ENST00000428298 472 ntTSL 3 BASIC5.3□□□□□ -1.56
YJEFN3A6XGL0 AL136231.1-201ENST00000429407 730 ntBASIC5.3□□□□□ -1.56
YJEFN3A6XGL0 RBMY2QP-201ENST00000429799 1147 ntBASIC5.3□□□□□ -1.56
YJEFN3A6XGL0 AL138767.2-201ENST00000446794 168 ntTSL 3 BASIC5.3□□□□□ -1.56
YJEFN3A6XGL0 AC048351.1-202ENST00000449483 735 ntTSL 3 BASIC5.3□□□□□ -1.56
YJEFN3A6XGL0 IGHV5-78-201ENST00000450948 295 ntBASIC5.3□□□□□ -1.56
YJEFN3A6XGL0 RN7SL329P-201ENST00000467740 299 ntBASIC5.3□□□□□ -1.56
YJEFN3A6XGL0 AC026316.2-201ENST00000473110 263 ntTSL 3 BASIC5.3□□□□□ -1.56
YJEFN3A6XGL0 AC016687.1-201ENST00000482574 353 ntBASIC5.3□□□□□ -1.56
YJEFN3A6XGL0 RPL37AP8-201ENST00000494116 276 ntBASIC5.3□□□□□ -1.56
YJEFN3A6XGL0 HMGB3P14-201ENST00000494195 599 ntBASIC5.3□□□□□ -1.56
YJEFN3A6XGL0 LINC00632-202ENST00000498732 746 ntTSL 3 BASIC5.3□□□□□ -1.56
YJEFN3A6XGL0 NIFKP7-201ENST00000503365 834 ntBASIC5.3□□□□□ -1.56
YJEFN3A6XGL0 AC119150.1-201ENST00000507143 563 ntTSL 2 BASIC5.3□□□□□ -1.56
YJEFN3A6XGL0 GOLGA5P1-201ENST00000507317 980 ntBASIC5.3□□□□□ -1.56
YJEFN3A6XGL0 AC020551.1-201ENST00000512036 539 ntTSL 3 BASIC5.3□□□□□ -1.56
YJEFN3A6XGL0 NPM1P21-201ENST00000513394 762 ntBASIC5.3□□□□□ -1.56
YJEFN3A6XGL0 RNA5SP43-201ENST00000516559 110 ntBASIC5.3□□□□□ -1.56
YJEFN3A6XGL0 AC062004.1-201ENST00000518706 686 ntTSL 3 BASIC5.3□□□□□ -1.56
YJEFN3A6XGL0 AC012613.1-201ENST00000522685 387 ntTSL 2 BASIC5.3□□□□□ -1.56
YJEFN3A6XGL0 AC100784.1-201ENST00000522790 310 ntBASIC5.3□□□□□ -1.56
YJEFN3A6XGL0 LINC02552-203ENST00000545630 583 ntTSL 2 BASIC5.3□□□□□ -1.56
YJEFN3A6XGL0 AC068643.1-201ENST00000548594 755 ntTSL 5 BASIC5.3□□□□□ -1.56
YJEFN3A6XGL0 AC105339.2-201ENST00000558342 1091 ntTSL 3 BASIC5.3□□□□□ -1.56
YJEFN3A6XGL0 AC040958.1-201ENST00000561102 201 ntBASIC5.3□□□□□ -1.56
YJEFN3A6XGL0 AC010551.2-201ENST00000569200 416 ntTSL 3 BASIC5.3□□□□□ -1.56
YJEFN3A6XGL0 AC007448.1-201ENST00000582714 234 ntBASIC5.3□□□□□ -1.56
YJEFN3A6XGL0 USP32P2-207ENST00000608376 253 ntTSL 5 BASIC5.3□□□□□ -1.56
YJEFN3A6XGL0 AC044839.1-205ENST00000614989 542 ntTSL 5 BASIC5.3□□□□□ -1.56
YJEFN3A6XGL0 Metazoa_SRP.55-201ENST00000618452 275 ntBASIC5.3□□□□□ -1.56
YJEFN3A6XGL0 KLHL5-202ENST00000261426 3300 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
YJEFN3A6XGL0 SLC1A3-201ENST00000265113 4170 ntAPPRIS P1 TSL 1 (best) BASIC5.3□□□□□ -1.56
YJEFN3A6XGL0 MUM1L1-202ENST00000357175 4173 ntAPPRIS P1 TSL 2 BASIC5.3□□□□□ -1.56
YJEFN3A6XGL0 FLG2-201ENST00000388718 9124 ntAPPRIS P1 TSL 5 BASIC5.3□□□□□ -1.56
YJEFN3A6XGL0 SETD2-202ENST00000409792 8142 ntAPPRIS P1 TSL 5 BASIC5.3□□□□□ -1.56
YJEFN3A6XGL0 CASC19-201ENST00000500112 5735 ntTSL 1 (best) BASIC5.29□□□□□ -1.56
YJEFN3A6XGL0 GCSAML-201ENST00000366488 3820 ntAPPRIS P3 TSL 1 (best) BASIC5.29□□□□□ -1.56
YJEFN3A6XGL0 AL121839.2-201ENST00000565058 6943 ntBASIC5.29□□□□□ -1.56
YJEFN3A6XGL0 ZNF143-201ENST00000299606 2562 ntTSL 5 BASIC5.29□□□□□ -1.56
YJEFN3A6XGL0 MYBPC1-205ENST00000536007 3512 ntAPPRIS ALT2 TSL 1 (best) BASIC5.29□□□□□ -1.56
YJEFN3A6XGL0 MYBPC1-206ENST00000541119 3533 ntAPPRIS ALT2 TSL 1 (best) BASIC5.29□□□□□ -1.56
YJEFN3A6XGL0 DCLRE1A-201ENST00000361384 4468 ntAPPRIS P1 TSL 1 (best) BASIC5.29□□□□□ -1.56
YJEFN3A6XGL0 LRRC53-201ENST00000294635 3859 ntAPPRIS P1 TSL 5 BASIC5.29□□□□□ -1.56
YJEFN3A6XGL0 RNA5SP428-201ENST00000365129 132 ntBASIC5.29□□□□□ -1.56
YJEFN3A6XGL0 SNORA66-201ENST00000384792 133 ntBASIC5.29□□□□□ -1.56
YJEFN3A6XGL0 IGLJ6-201ENST00000390328 70 ntAPPRIS P1 BASIC5.29□□□□□ -1.56
YJEFN3A6XGL0 ARSD-AS1-201ENST00000414053 816 ntTSL 2 BASIC5.29□□□□□ -1.56
YJEFN3A6XGL0 AL591468.1-201ENST00000417932 573 ntTSL 3 BASIC5.29□□□□□ -1.56
YJEFN3A6XGL0 ICA1L-206ENST00000418208 602 ntTSL 4 BASIC5.29□□□□□ -1.56
YJEFN3A6XGL0 RFESDP1-201ENST00000422350 461 ntBASIC5.29□□□□□ -1.56
YJEFN3A6XGL0 COX6CP13-201ENST00000428703 226 ntBASIC5.29□□□□□ -1.56
YJEFN3A6XGL0 RPL7AP61-201ENST00000443410 636 ntBASIC5.29□□□□□ -1.56
YJEFN3A6XGL0 AL157385.1-201ENST00000446973 268 ntBASIC5.29□□□□□ -1.56
YJEFN3A6XGL0 AL354714.3-201ENST00000447284 493 ntBASIC5.29□□□□□ -1.56
YJEFN3A6XGL0 TCEA1P1-201ENST00000449716 880 ntBASIC5.29□□□□□ -1.56
YJEFN3A6XGL0 EIF4EBP2P1-201ENST00000450009 343 ntBASIC5.29□□□□□ -1.56
YJEFN3A6XGL0 OR6C72P-201ENST00000451403 892 ntBASIC5.29□□□□□ -1.56
YJEFN3A6XGL0 AC091180.1-201ENST00000462104 372 ntBASIC5.29□□□□□ -1.56
YJEFN3A6XGL0 SEPT7P6-201ENST00000469999 1143 ntBASIC5.29□□□□□ -1.56
YJEFN3A6XGL0 AC078828.1-201ENST00000471993 458 ntTSL 3 BASIC5.29□□□□□ -1.56
YJEFN3A6XGL0 AC008410.1-201ENST00000483777 339 ntBASIC5.29□□□□□ -1.56
YJEFN3A6XGL0 RN7SL244P-201ENST00000493405 297 ntBASIC5.29□□□□□ -1.56
YJEFN3A6XGL0 TM4SF1-AS1-202ENST00000496491 754 ntTSL 2 BASIC5.29□□□□□ -1.56
YJEFN3A6XGL0 SPTSSB-202ENST00000497137 880 ntAPPRIS P1 TSL 3 BASIC5.29□□□□□ -1.56
YJEFN3A6XGL0 SDHAF2-208ENST00000543265 438 ntTSL 5 BASIC5.29□□□□□ -1.56
YJEFN3A6XGL0 HAGLR-211ENST00000549329 609 ntTSL 4 BASIC5.29□□□□□ -1.56
YJEFN3A6XGL0 AC055874.1-201ENST00000561458 479 ntTSL 2 BASIC5.29□□□□□ -1.56
Retrieved 100 of 98,524 protein–RNA pairs in 80.8 ms