Protein–RNA interactions for Protein: A0A140T963

RNF103-CHMP3, RNF103-CHMP3 readthrough (Fragment), humanhuman

Predictions only

Length 221 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF103-CHMP3A0A140T963 NEAT1-202ENST00000501122 22743 ntBASIC5.13□□□□□ -1.59
RNF103-CHMP3A0A140T963 PARP11-201ENST00000228820 4424 ntAPPRIS P1 TSL 1 (best) BASIC5.13□□□□□ -1.59
RNF103-CHMP3A0A140T963 PARP11-203ENST00000427057 4406 ntTSL 1 (best) BASIC5.13□□□□□ -1.59
RNF103-CHMP3A0A140T963 TNFSF11-202ENST00000358545 1520 ntTSL 1 (best) BASIC5.13□□□□□ -1.59
RNF103-CHMP3A0A140T963 C9orf57-201ENST00000377024 1502 ntAPPRIS P2 TSL 1 (best) BASIC5.13□□□□□ -1.59
RNF103-CHMP3A0A140T963 SYT16-205ENST00000568344 13978 ntAPPRIS P1 TSL 1 (best) BASIC5.12□□□□□ -1.59
RNF103-CHMP3A0A140T963 IL1RAPL1-202ENST00000378993 3667 ntAPPRIS P1 TSL 1 (best) BASIC5.12□□□□□ -1.59
RNF103-CHMP3A0A140T963 GRAMD2B-210ENST00000511134 1577 ntTSL 2 BASIC5.12□□□□□ -1.59
RNF103-CHMP3A0A140T963 GHR-210ENST00000615111 4814 ntAPPRIS P1 TSL 5 BASIC5.12□□□□□ -1.59
RNF103-CHMP3A0A140T963 CNTN5-207ENST00000527185 4303 ntTSL 1 (best) BASIC5.12□□□□□ -1.59
RNF103-CHMP3A0A140T963 AC025574.1-201ENST00000554784 1653 ntBASIC5.12□□□□□ -1.59
RNF103-CHMP3A0A140T963 AP000542.2-201ENST00000623199 6179 ntBASIC5.12□□□□□ -1.59
RNF103-CHMP3A0A140T963 ZNF445-201ENST00000396077 18299 ntAPPRIS P1 TSL 1 (best) BASIC5.12□□□□□ -1.59
RNF103-CHMP3A0A140T963 EHBP1-202ENST00000405015 4108 ntAPPRIS ALT2 TSL 2 BASIC5.12□□□□□ -1.59
RNF103-CHMP3A0A140T963 ATPAF1-212ENST00000542495 1779 ntTSL 2 BASIC5.12□□□□□ -1.59
RNF103-CHMP3A0A140T963 CEP164P1-202ENST00000456938 2472 ntTSL 1 (best) BASIC5.12□□□□□ -1.59
RNF103-CHMP3A0A140T963 WDR5B-201ENST00000330689 3720 ntAPPRIS P1 BASIC5.12□□□□□ -1.59
RNF103-CHMP3A0A140T963 ADCY10-201ENST00000367848 5055 ntTSL 1 (best) BASIC5.12□□□□□ -1.59
RNF103-CHMP3A0A140T963 CRYAB-201ENST00000227251 848 ntAPPRIS P1 TSL 5 BASIC5.12□□□□□ -1.59
RNF103-CHMP3A0A140T963 OR5T3-202ENST00000313033 969 ntAPPRIS P1 BASIC5.12□□□□□ -1.59
RNF103-CHMP3A0A140T963 CFHR1-201ENST00000320493 1271 ntAPPRIS P1 TSL 1 (best) BASIC5.12□□□□□ -1.59
RNF103-CHMP3A0A140T963 AC023490.2-201ENST00000359859 470 ntBASIC5.12□□□□□ -1.59
RNF103-CHMP3A0A140T963 RN7SKP6-201ENST00000364795 319 ntBASIC5.12□□□□□ -1.59
RNF103-CHMP3A0A140T963 LST1-207ENST00000376092 285 ntTSL 1 (best) BASIC5.12□□□□□ -1.59
RNF103-CHMP3A0A140T963 IFNA21-201ENST00000380225 1024 ntAPPRIS P1 BASIC5.12□□□□□ -1.59
RNF103-CHMP3A0A140T963 YAF2-202ENST00000380790 1211 ntTSL 2 BASIC5.12□□□□□ -1.59
RNF103-CHMP3A0A140T963 GSTA12P-201ENST00000402398 508 ntBASIC5.12□□□□□ -1.59
RNF103-CHMP3A0A140T963 AC092111.3-201ENST00000402465 496 ntAPPRIS P1 TSL 2 BASIC5.12□□□□□ -1.59
RNF103-CHMP3A0A140T963 LYPLA1P3-201ENST00000402650 695 ntBASIC5.12□□□□□ -1.59
RNF103-CHMP3A0A140T963 RNU2-50P-201ENST00000410494 143 ntBASIC5.12□□□□□ -1.59
RNF103-CHMP3A0A140T963 HMGN1P20-201ENST00000411849 300 ntBASIC5.12□□□□□ -1.59
RNF103-CHMP3A0A140T963 OR2AT2P-201ENST00000413438 905 ntBASIC5.12□□□□□ -1.59
RNF103-CHMP3A0A140T963 RPA2P2-201ENST00000419698 796 ntBASIC5.12□□□□□ -1.59
RNF103-CHMP3A0A140T963 OR4K3-201ENST00000425829 947 ntAPPRIS P1 BASIC5.12□□□□□ -1.59
RNF103-CHMP3A0A140T963 AL662874.1-201ENST00000426065 230 ntBASIC5.12□□□□□ -1.59
RNF103-CHMP3A0A140T963 GNGT1-203ENST00000429473 538 ntAPPRIS P1 TSL 1 (best) BASIC5.12□□□□□ -1.59
RNF103-CHMP3A0A140T963 LINC01889-201ENST00000430692 668 ntTSL 5 BASIC5.12□□□□□ -1.59
RNF103-CHMP3A0A140T963 AC090018.1-201ENST00000434369 367 ntBASIC5.12□□□□□ -1.59
RNF103-CHMP3A0A140T963 AF064858.2-201ENST00000440714 292 ntTSL 3 BASIC5.12□□□□□ -1.59
RNF103-CHMP3A0A140T963 CYCSP24-201ENST00000445119 316 ntBASIC5.12□□□□□ -1.59
RNF103-CHMP3A0A140T963 EEF1B2P6-201ENST00000445713 673 ntBASIC5.12□□□□□ -1.59
RNF103-CHMP3A0A140T963 AL450023.1-201ENST00000450868 751 ntBASIC5.12□□□□□ -1.59
RNF103-CHMP3A0A140T963 PPIA-203ENST00000451562 544 ntTSL 2 BASIC5.12□□□□□ -1.59
RNF103-CHMP3A0A140T963 AL354710.1-201ENST00000453641 246 ntBASIC5.12□□□□□ -1.59
RNF103-CHMP3A0A140T963 SPRR2F-201ENST00000468739 681 ntAPPRIS P1 TSL 3 BASIC5.12□□□□□ -1.59
RNF103-CHMP3A0A140T963 CFHR2-203ENST00000476712 1020 ntAPPRIS ALT2 TSL 3 BASIC5.12□□□□□ -1.59
RNF103-CHMP3A0A140T963 RN7SL741P-201ENST00000482473 289 ntBASIC5.12□□□□□ -1.59
RNF103-CHMP3A0A140T963 PCNAP1-201ENST00000505363 709 ntBASIC5.12□□□□□ -1.59
RNF103-CHMP3A0A140T963 GYPB-213ENST00000513128 360 ntTSL 1 (best) BASIC5.12□□□□□ -1.59
RNF103-CHMP3A0A140T963 SCARNA20.4-201ENST00000516969 131 ntBASIC5.12□□□□□ -1.59
RNF103-CHMP3A0A140T963 CYCSP22-201ENST00000517555 339 ntBASIC5.12□□□□□ -1.59
RNF103-CHMP3A0A140T963 AC104997.1-201ENST00000519761 717 ntBASIC5.12□□□□□ -1.59
RNF103-CHMP3A0A140T963 AC005363.1-201ENST00000530779 351 ntBASIC5.12□□□□□ -1.59
RNF103-CHMP3A0A140T963 ALG9-IT1-201ENST00000531305 684 ntTSL 3 BASIC5.12□□□□□ -1.59
RNF103-CHMP3A0A140T963 OR8G3P-201ENST00000533406 921 ntBASIC5.12□□□□□ -1.59
RNF103-CHMP3A0A140T963 AL132800.1-201ENST00000555109 698 ntTSL 5 BASIC5.12□□□□□ -1.59
RNF103-CHMP3A0A140T963 AL355076.2-201ENST00000555736 544 ntTSL 5 BASIC5.12□□□□□ -1.59
RNF103-CHMP3A0A140T963 AC113208.4-201ENST00000563568 206 ntTSL 3 BASIC5.12□□□□□ -1.59
RNF103-CHMP3A0A140T963 AC007431.2-201ENST00000577189 563 ntTSL 2 BASIC5.12□□□□□ -1.59
RNF103-CHMP3A0A140T963 AC015845.1-202ENST00000580184 242 ntTSL 3 BASIC5.12□□□□□ -1.59
RNF103-CHMP3A0A140T963 AC005828.3-201ENST00000583552 591 ntTSL 5 BASIC5.12□□□□□ -1.59
RNF103-CHMP3A0A140T963 AC090415.2-201ENST00000584078 374 ntTSL 3 BASIC5.12□□□□□ -1.59
RNF103-CHMP3A0A140T963 AC068020.1-201ENST00000594215 661 ntBASIC5.12□□□□□ -1.59
RNF103-CHMP3A0A140T963 AC012616.1-201ENST00000600294 197 ntBASIC5.12□□□□□ -1.59
RNF103-CHMP3A0A140T963 AC130352.1-201ENST00000602979 661 ntBASIC5.12□□□□□ -1.59
RNF103-CHMP3A0A140T963 AC005021.1-201ENST00000608730 355 ntBASIC5.12□□□□□ -1.59
RNF103-CHMP3A0A140T963 MALAT1-205ENST00000610851 584 ntTSL 2 BASIC5.12□□□□□ -1.59
RNF103-CHMP3A0A140T963 PRG4-203ENST00000367485 4765 ntAPPRIS ALT2 TSL 5 BASIC5.12□□□□□ -1.59
RNF103-CHMP3A0A140T963 PKIB-207ENST00000392491 1379 ntAPPRIS P1 TSL 1 (best) BASIC5.12□□□□□ -1.59
RNF103-CHMP3A0A140T963 SPATA2P1-201ENST00000431223 2055 ntBASIC5.12□□□□□ -1.59
RNF103-CHMP3A0A140T963 CDC14A-206ENST00000635056 2056 ntTSL 2 BASIC5.12□□□□□ -1.59
RNF103-CHMP3A0A140T963 WDR63-203ENST00000370596 2905 ntAPPRIS ALT2 TSL 5 BASIC5.12□□□□□ -1.59
RNF103-CHMP3A0A140T963 TCP1P3-201ENST00000414406 1498 ntBASIC5.12□□□□□ -1.59
RNF103-CHMP3A0A140T963 SERPINA9-204ENST00000424550 1462 ntTSL 1 (best) BASIC5.12□□□□□ -1.59
RNF103-CHMP3A0A140T963 SPEF2-216ENST00000637569 7350 ntAPPRIS ALT2 TSL 5 BASIC5.12□□□□□ -1.59
RNF103-CHMP3A0A140T963 IPCEF1-210ENST00000519344 1621 ntAPPRIS ALT2 TSL 5 BASIC5.12□□□□□ -1.59
RNF103-CHMP3A0A140T963 AC000374.1-201ENST00000434698 1745 ntBASIC5.11□□□□□ -1.59
RNF103-CHMP3A0A140T963 LYRM2-208ENST00000523377 5353 ntAPPRIS P1 TSL 1 (best) BASIC5.11□□□□□ -1.59
RNF103-CHMP3A0A140T963 FAM204A-203ENST00000369183 13889 ntAPPRIS P1 TSL 1 (best) BASIC5.11□□□□□ -1.59
RNF103-CHMP3A0A140T963 IL6ST-212ENST00000522633 1878 ntTSL 1 (best) BASIC5.11□□□□□ -1.59
RNF103-CHMP3A0A140T963 AFP-201ENST00000226359 1914 ntTSL 5 BASIC5.11□□□□□ -1.59
RNF103-CHMP3A0A140T963 USP8-202ENST00000396444 19026 ntAPPRIS P1 TSL 1 (best) BASIC5.11□□□□□ -1.59
RNF103-CHMP3A0A140T963 PDE10A-201ENST00000366882 8233 ntAPPRIS P3 TSL 5 BASIC5.11□□□□□ -1.59
RNF103-CHMP3A0A140T963 RLIM-201ENST00000332687 8317 ntAPPRIS P1 TSL 1 (best) BASIC5.11□□□□□ -1.59
RNF103-CHMP3A0A140T963 ZNF440-201ENST00000304060 4189 ntAPPRIS P1 TSL 1 (best) BASIC5.11□□□□□ -1.59
RNF103-CHMP3A0A140T963 OR2J3-202ENST00000641151 3297 ntAPPRIS P1 BASIC5.11□□□□□ -1.59
RNF103-CHMP3A0A140T963 PTPRD-201ENST00000355233 8251 ntTSL 1 (best) BASIC5.11□□□□□ -1.59
RNF103-CHMP3A0A140T963 TRPM3-206ENST00000377097 554 ntTSL 2 BASIC5.11□□□□□ -1.59
RNF103-CHMP3A0A140T963 OR2B3-201ENST00000377173 1106 ntAPPRIS P1 BASIC5.11□□□□□ -1.59
RNF103-CHMP3A0A140T963 KRTAP29-1-201ENST00000391353 1026 ntAPPRIS P1 BASIC5.11□□□□□ -1.59
RNF103-CHMP3A0A140T963 AC092687.1-201ENST00000418835 389 ntTSL 3 BASIC5.11□□□□□ -1.59
RNF103-CHMP3A0A140T963 OXSM-202ENST00000420173 1256 ntTSL 1 (best) BASIC5.11□□□□□ -1.59
RNF103-CHMP3A0A140T963 BX119321.1-201ENST00000428912 797 ntBASIC5.11□□□□□ -1.59
RNF103-CHMP3A0A140T963 AL713851.2-201ENST00000431209 332 ntTSL 2 BASIC5.11□□□□□ -1.59
RNF103-CHMP3A0A140T963 AC017002.1-201ENST00000432268 881 ntTSL 5 BASIC5.11□□□□□ -1.59
RNF103-CHMP3A0A140T963 AC007563.3-201ENST00000433233 371 ntBASIC5.11□□□□□ -1.59
RNF103-CHMP3A0A140T963 PCBP1-AS1-232ENST00000442040 1111 ntTSL 3 BASIC5.11□□□□□ -1.59
RNF103-CHMP3A0A140T963 TRBV2-201ENST00000455382 421 ntAPPRIS P1 BASIC5.11□□□□□ -1.59
RNF103-CHMP3A0A140T963 PSMC1P13-201ENST00000458195 985 ntBASIC5.11□□□□□ -1.59
RNF103-CHMP3A0A140T963 AC007003.1-201ENST00000472463 736 ntTSL 1 (best) BASIC5.11□□□□□ -1.59
Retrieved 100 of 98,524 protein–RNA pairs in 90.3 ms