Protein–RNA interactions for Protein: Q9Y2D8

SSX2IP, Afadin- and alpha-actinin-binding protein, humanhuman

Predictions only

Length 614 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSX2IPQ9Y2D8 AC017002.4-201ENST00000604721 1525 ntBASIC6.13□□□□□ -1.43
SSX2IPQ9Y2D8 OOSP2-201ENST00000278855 1633 ntAPPRIS P2 TSL 1 (best) BASIC6.13□□□□□ -1.43
SSX2IPQ9Y2D8 NAT1-201ENST00000307719 1815 ntAPPRIS P1 TSL 1 (best) BASIC6.13□□□□□ -1.43
SSX2IPQ9Y2D8 MDN1-201ENST00000369393 18413 ntAPPRIS P1 TSL 1 (best) BASIC6.13□□□□□ -1.43
SSX2IPQ9Y2D8 SRRM1P3-201ENST00000426911 2678 ntBASIC6.12□□□□□ -1.43
SSX2IPQ9Y2D8 LINC02401-201ENST00000550185 3059 ntTSL 1 (best) BASIC6.12□□□□□ -1.43
SSX2IPQ9Y2D8 CLCN3-201ENST00000347613 3635 ntAPPRIS P4 TSL 1 (best) BASIC6.12□□□□□ -1.43
SSX2IPQ9Y2D8 ZNF347-201ENST00000334197 7960 ntAPPRIS P3 TSL 1 (best) BASIC6.12□□□□□ -1.43
SSX2IPQ9Y2D8 AGO3-203ENST00000373191 19687 ntAPPRIS P1 TSL 2 BASIC6.12□□□□□ -1.43
SSX2IPQ9Y2D8 TNFAIP6-201ENST00000243347 1424 ntAPPRIS P1 TSL 1 (best) BASIC6.12□□□□□ -1.43
SSX2IPQ9Y2D8 GPATCH11-201ENST00000281932 3570 ntTSL 1 (best) BASIC6.12□□□□□ -1.43
SSX2IPQ9Y2D8 AL159987.1-201ENST00000347911 293 ntBASIC6.12□□□□□ -1.43
SSX2IPQ9Y2D8 RNU1-19P-201ENST00000363306 165 ntBASIC6.12□□□□□ -1.43
SSX2IPQ9Y2D8 SNORA74A-201ENST00000364089 198 ntBASIC6.12□□□□□ -1.43
SSX2IPQ9Y2D8 RNU4-2-201ENST00000365668 141 ntBASIC6.12□□□□□ -1.43
SSX2IPQ9Y2D8 EEF1A1P14-201ENST00000421195 1376 ntBASIC6.12□□□□□ -1.43
SSX2IPQ9Y2D8 C5orf58-201ENST00000421269 406 ntAPPRIS ALT2 TSL 2 BASIC6.12□□□□□ -1.43
SSX2IPQ9Y2D8 BX276092.6-201ENST00000430476 250 ntBASIC6.12□□□□□ -1.43
SSX2IPQ9Y2D8 FTLP19-201ENST00000433300 394 ntBASIC6.12□□□□□ -1.43
SSX2IPQ9Y2D8 PTP4A1P3-201ENST00000433661 420 ntBASIC6.12□□□□□ -1.43
SSX2IPQ9Y2D8 AC012075.1-201ENST00000436549 580 ntBASIC6.12□□□□□ -1.43
SSX2IPQ9Y2D8 RPL12P18-201ENST00000437175 325 ntBASIC6.12□□□□□ -1.43
SSX2IPQ9Y2D8 AC015983.1-201ENST00000441577 373 ntBASIC6.12□□□□□ -1.43
SSX2IPQ9Y2D8 CATSPER2P1-205ENST00000446479 419 ntTSL 1 (best) BASIC6.12□□□□□ -1.43
SSX2IPQ9Y2D8 BX276092.8-201ENST00000455722 250 ntBASIC6.12□□□□□ -1.43
SSX2IPQ9Y2D8 DUXAP8-207ENST00000456786 622 ntBASIC6.12□□□□□ -1.43
SSX2IPQ9Y2D8 AC100832.1-201ENST00000471945 383 ntBASIC6.12□□□□□ -1.43
SSX2IPQ9Y2D8 AC022336.1-201ENST00000475510 337 ntBASIC6.12□□□□□ -1.43
SSX2IPQ9Y2D8 STRADBP1-201ENST00000478954 1281 ntBASIC6.12□□□□□ -1.43
SSX2IPQ9Y2D8 AC092916.1-201ENST00000497896 411 ntTSL 3 BASIC6.12□□□□□ -1.43
SSX2IPQ9Y2D8 AC093801.1-201ENST00000504017 307 ntTSL 2 BASIC6.12□□□□□ -1.43
SSX2IPQ9Y2D8 MIR2117-201ENST00000516780 80 ntBASIC6.12□□□□□ -1.43
SSX2IPQ9Y2D8 LGALS8-222ENST00000527974 1349 ntAPPRIS P4 TSL 5 BASIC6.12□□□□□ -1.43
SSX2IPQ9Y2D8 CDKN3-206ENST00000541304 1070 ntTSL 2 BASIC6.12□□□□□ -1.43
SSX2IPQ9Y2D8 AC078820.1-201ENST00000548702 742 ntTSL 3 BASIC6.12□□□□□ -1.43
SSX2IPQ9Y2D8 AC126615.2-201ENST00000553003 515 ntBASIC6.12□□□□□ -1.43
SSX2IPQ9Y2D8 AC004825.1-201ENST00000555068 586 ntBASIC6.12□□□□□ -1.43
SSX2IPQ9Y2D8 AC087286.2-201ENST00000558980 660 ntTSL 3 BASIC6.12□□□□□ -1.43
SSX2IPQ9Y2D8 LINC01243-201ENST00000562065 721 ntTSL 1 (best) BASIC6.12□□□□□ -1.43
SSX2IPQ9Y2D8 AC010761.5-201ENST00000579468 287 ntTSL 3 BASIC6.12□□□□□ -1.43
SSX2IPQ9Y2D8 AC145207.6-201ENST00000579981 782 ntTSL 5 BASIC6.12□□□□□ -1.43
SSX2IPQ9Y2D8 MIR132-201ENST00000591554 101 ntBASIC6.12□□□□□ -1.43
SSX2IPQ9Y2D8 AC008277.1-203ENST00000594921 1149 ntTSL 5 BASIC6.12□□□□□ -1.43
SSX2IPQ9Y2D8 IMMP1LP3-201ENST00000604197 224 ntBASIC6.12□□□□□ -1.43
SSX2IPQ9Y2D8 AC010245.2-201ENST00000606908 1167 ntBASIC6.12□□□□□ -1.43
SSX2IPQ9Y2D8 AP001033.2-201ENST00000609701 1003 ntBASIC6.12□□□□□ -1.43
SSX2IPQ9Y2D8 DUXAP10-204ENST00000612052 616 ntBASIC6.12□□□□□ -1.43
SSX2IPQ9Y2D8 MIR8084-201ENST00000614105 89 ntBASIC6.12□□□□□ -1.43
SSX2IPQ9Y2D8 AC130304.1-201ENST00000622942 2385 ntBASIC6.12□□□□□ -1.43
SSX2IPQ9Y2D8 OR10AB1P-202ENST00000641219 1686 ntBASIC6.12□□□□□ -1.43
SSX2IPQ9Y2D8 SAMMSON-209ENST00000641222 1100 ntBASIC6.12□□□□□ -1.43
SSX2IPQ9Y2D8 EXPH5-201ENST00000265843 10187 ntAPPRIS P3 TSL 1 (best) BASIC6.12□□□□□ -1.43
SSX2IPQ9Y2D8 CFAP57-204ENST00000528956 3037 ntTSL 2 BASIC6.12□□□□□ -1.43
SSX2IPQ9Y2D8 ZNF721-201ENST00000338977 4492 ntTSL 2 BASIC6.11□□□□□ -1.43
SSX2IPQ9Y2D8 PIGN-239ENST00000639902 4439 ntTSL 5 BASIC6.11□□□□□ -1.43
SSX2IPQ9Y2D8 LINC01179-201ENST00000507838 2163 ntTSL 1 (best) BASIC6.11□□□□□ -1.43
SSX2IPQ9Y2D8 EIF3M-208ENST00000531120 5051 ntAPPRIS P1 TSL 1 (best) BASIC6.11□□□□□ -1.43
SSX2IPQ9Y2D8 EXOC1-201ENST00000346134 3357 ntAPPRIS P4 TSL 2 BASIC6.11□□□□□ -1.43
SSX2IPQ9Y2D8 C2orf66-201ENST00000342506 1669 ntAPPRIS P1 TSL 1 (best) BASIC6.11□□□□□ -1.43
SSX2IPQ9Y2D8 CKAP5-202ENST00000354558 6428 ntTSL 1 (best) BASIC6.11□□□□□ -1.43
SSX2IPQ9Y2D8 AL590763.1-201ENST00000398297 1545 ntBASIC6.11□□□□□ -1.43
SSX2IPQ9Y2D8 ANGPT1-205ENST00000520052 1523 ntTSL 5 BASIC6.11□□□□□ -1.43
SSX2IPQ9Y2D8 SULF1-204ENST00000458141 5551 ntAPPRIS P1 TSL 1 (best) BASIC6.11□□□□□ -1.43
SSX2IPQ9Y2D8 PDE5A-203ENST00000394439 6770 ntAPPRIS ALT2 TSL 5 BASIC6.11□□□□□ -1.43
SSX2IPQ9Y2D8 AC106870.1-201ENST00000359823 200 ntTSL 3 BASIC6.11□□□□□ -1.43
SSX2IPQ9Y2D8 BPHL-201ENST00000380368 797 ntTSL 5 BASIC6.11□□□□□ -1.43
SSX2IPQ9Y2D8 AC009804.1-201ENST00000400949 179 ntBASIC6.11□□□□□ -1.43
SSX2IPQ9Y2D8 MTCO2P8-201ENST00000412213 658 ntBASIC6.11□□□□□ -1.43
SSX2IPQ9Y2D8 AL445213.1-201ENST00000412589 747 ntBASIC6.11□□□□□ -1.43
SSX2IPQ9Y2D8 AC099654.1-202ENST00000415836 564 ntTSL 4 BASIC6.11□□□□□ -1.43
SSX2IPQ9Y2D8 SOS1-IT1-201ENST00000420644 539 ntTSL 5 BASIC6.11□□□□□ -1.43
SSX2IPQ9Y2D8 C14orf105-202ENST00000422976 1153 ntTSL 1 (best) BASIC6.11□□□□□ -1.43
SSX2IPQ9Y2D8 AL133173.1-201ENST00000423458 397 ntBASIC6.11□□□□□ -1.43
SSX2IPQ9Y2D8 AC008164.1-201ENST00000423925 564 ntTSL 4 BASIC6.11□□□□□ -1.43
SSX2IPQ9Y2D8 MAGI2-AS3-204ENST00000426835 738 ntTSL 3 BASIC6.11□□□□□ -1.43
SSX2IPQ9Y2D8 AL353693.1-201ENST00000429567 442 ntTSL 3 BASIC6.11□□□□□ -1.43
SSX2IPQ9Y2D8 AC072062.1-204ENST00000437897 1132 ntTSL 5 BASIC6.11□□□□□ -1.43
SSX2IPQ9Y2D8 AC024597.1-201ENST00000442753 706 ntTSL 5 BASIC6.11□□□□□ -1.43
SSX2IPQ9Y2D8 BX119904.2-201ENST00000446495 512 ntTSL 2 BASIC6.11□□□□□ -1.43
SSX2IPQ9Y2D8 RPS26P41-201ENST00000450370 284 ntBASIC6.11□□□□□ -1.43
SSX2IPQ9Y2D8 OSTCP1-201ENST00000455507 450 ntBASIC6.11□□□□□ -1.43
SSX2IPQ9Y2D8 GTPBP8-204ENST00000467752 686 ntTSL 5 BASIC6.11□□□□□ -1.43
SSX2IPQ9Y2D8 COPS8P2-201ENST00000473228 627 ntBASIC6.11□□□□□ -1.43
SSX2IPQ9Y2D8 RN7SL799P-201ENST00000475891 298 ntBASIC6.11□□□□□ -1.43
SSX2IPQ9Y2D8 LINC00518-204ENST00000491317 1228 ntTSL 2 BASIC6.11□□□□□ -1.43
SSX2IPQ9Y2D8 OR10J4-201ENST00000504970 935 ntAPPRIS P1 BASIC6.11□□□□□ -1.43
SSX2IPQ9Y2D8 AC139365.2-201ENST00000517972 253 ntBASIC6.11□□□□□ -1.43
SSX2IPQ9Y2D8 WDYHV1-203ENST00000518125 880 ntTSL 2 BASIC6.11□□□□□ -1.43
SSX2IPQ9Y2D8 AC084706.1-201ENST00000521879 558 ntTSL 2 BASIC6.11□□□□□ -1.43
SSX2IPQ9Y2D8 AC104115.2-201ENST00000523026 687 ntBASIC6.11□□□□□ -1.43
SSX2IPQ9Y2D8 AC113386.1-201ENST00000523584 381 ntTSL 5 BASIC6.11□□□□□ -1.43
SSX2IPQ9Y2D8 SOX5P1-201ENST00000524155 1127 ntBASIC6.11□□□□□ -1.43
SSX2IPQ9Y2D8 AC068722.1-202ENST00000559600 655 ntTSL 3 BASIC6.11□□□□□ -1.43
SSX2IPQ9Y2D8 AC096996.1-201ENST00000563813 325 ntBASIC6.11□□□□□ -1.43
SSX2IPQ9Y2D8 LINC02129-201ENST00000564381 692 ntTSL 5 BASIC6.11□□□□□ -1.43
SSX2IPQ9Y2D8 MIR1269B-201ENST00000580405 75 ntBASIC6.11□□□□□ -1.43
SSX2IPQ9Y2D8 AC098617.1-205ENST00000595918 1032 ntTSL 5 BASIC6.11□□□□□ -1.43
SSX2IPQ9Y2D8 AC023762.1-201ENST00000603280 584 ntBASIC6.11□□□□□ -1.43
SSX2IPQ9Y2D8 AL121652.1-201ENST00000608851 448 ntBASIC6.11□□□□□ -1.43
SSX2IPQ9Y2D8 AC140725.3-201ENST00000616193 880 ntBASIC6.11□□□□□ -1.43
Retrieved 100 of 98,524 protein–RNA pairs in 107.3 ms