Protein–RNA interactions for Protein: Q9Y2B5

VPS9D1, VPS9 domain-containing protein 1, humanhuman

Predictions only

Length 631 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS9D1Q9Y2B5 AC097493.1-201ENST00000463958 372 ntBASIC7.96□□□□□ -1.14
VPS9D1Q9Y2B5 AL122013.1-201ENST00000473054 801 ntBASIC7.96□□□□□ -1.14
VPS9D1Q9Y2B5 EPDR1-204ENST00000476620 555 ntTSL 4 BASIC7.96□□□□□ -1.14
VPS9D1Q9Y2B5 ADAM3A-206ENST00000484602 1046 ntTSL 2 BASIC7.96□□□□□ -1.14
VPS9D1Q9Y2B5 RN7SL434P-201ENST00000495872 271 ntBASIC7.96□□□□□ -1.14
VPS9D1Q9Y2B5 RNU6-273P-201ENST00000516937 96 ntBASIC7.96□□□□□ -1.14
VPS9D1Q9Y2B5 AC105150.1-201ENST00000518011 551 ntTSL 3 BASIC7.96□□□□□ -1.14
VPS9D1Q9Y2B5 AC048387.1-201ENST00000518428 494 ntTSL 3 BASIC7.96□□□□□ -1.14
VPS9D1Q9Y2B5 AP002954.1-201ENST00000526274 425 ntTSL 3 BASIC7.96□□□□□ -1.14
VPS9D1Q9Y2B5 GLYATL1P4-201ENST00000529326 906 ntBASIC7.96□□□□□ -1.14
VPS9D1Q9Y2B5 AC073525.1-202ENST00000550049 732 ntTSL 3 BASIC7.96□□□□□ -1.14
VPS9D1Q9Y2B5 AC068722.1-202ENST00000559600 655 ntTSL 3 BASIC7.96□□□□□ -1.14
VPS9D1Q9Y2B5 RN7SL785P-201ENST00000578437 253 ntBASIC7.96□□□□□ -1.14
VPS9D1Q9Y2B5 AC090312.2-201ENST00000582687 378 ntBASIC7.96□□□□□ -1.14
VPS9D1Q9Y2B5 AC006130.1-201ENST00000589365 555 ntTSL 4 BASIC7.96□□□□□ -1.14
VPS9D1Q9Y2B5 RPS11-202ENST00000594493 575 ntTSL 3 BASIC7.96□□□□□ -1.14
VPS9D1Q9Y2B5 HNRNPA1P67-201ENST00000604027 926 ntBASIC7.96□□□□□ -1.14
VPS9D1Q9Y2B5 AC007255.2-201ENST00000604053 631 ntBASIC7.96□□□□□ -1.14
VPS9D1Q9Y2B5 AC000068.3-201ENST00000607934 427 ntBASIC7.96□□□□□ -1.14
VPS9D1Q9Y2B5 AP003121.1-201ENST00000609845 414 ntTSL 3 BASIC7.96□□□□□ -1.14
VPS9D1Q9Y2B5 AC130324.3-201ENST00000614165 542 ntBASIC7.96□□□□□ -1.14
VPS9D1Q9Y2B5 AC015967.1-201ENST00000619893 476 ntBASIC7.96□□□□□ -1.14
VPS9D1Q9Y2B5 AC108724.2-201ENST00000634593 290 ntBASIC7.96□□□□□ -1.14
VPS9D1Q9Y2B5 PRPS1L1-202ENST00000638645 957 ntAPPRIS P2 BASIC7.96□□□□□ -1.14
VPS9D1Q9Y2B5 OR52H1-202ENST00000641796 1061 ntBASIC7.96□□□□□ -1.14
VPS9D1Q9Y2B5 SMG1-202ENST00000446231 16115 ntAPPRIS P1 TSL 1 (best) BASIC7.96□□□□□ -1.14
VPS9D1Q9Y2B5 CFHR3-205ENST00000471440 1965 ntTSL 1 (best) BASIC7.96□□□□□ -1.14
VPS9D1Q9Y2B5 ATP6V1A-201ENST00000273398 4591 ntAPPRIS P1 TSL 1 (best) BASIC7.96□□□□□ -1.14
VPS9D1Q9Y2B5 NFX1-203ENST00000379540 4604 ntAPPRIS P1 TSL 1 (best) BASIC7.96□□□□□ -1.14
VPS9D1Q9Y2B5 ESRP1-202ENST00000423620 3746 ntAPPRIS ALT1 TSL 1 (best) BASIC7.96□□□□□ -1.14
VPS9D1Q9Y2B5 TRIM51-201ENST00000244891 1329 ntTSL 1 (best) BASIC7.96□□□□□ -1.14
VPS9D1Q9Y2B5 ZNF652P1-201ENST00000442420 1309 ntBASIC7.96□□□□□ -1.14
VPS9D1Q9Y2B5 NUMB-205ENST00000544991 2757 ntTSL 5 BASIC7.96□□□□□ -1.14
VPS9D1Q9Y2B5 RPL12P38-202ENST00000588627 2319 ntBASIC7.96□□□□□ -1.14
VPS9D1Q9Y2B5 ANKS1B-215ENST00000549493 3328 ntTSL 1 (best) BASIC7.96□□□□□ -1.14
VPS9D1Q9Y2B5 ERAP1-202ENST00000443439 4805 ntAPPRIS P1 TSL 1 (best) BASIC7.96□□□□□ -1.14
VPS9D1Q9Y2B5 PARN-201ENST00000341484 2100 ntTSL 2 BASIC7.96□□□□□ -1.14
VPS9D1Q9Y2B5 AGBL4-203ENST00000371838 1353 ntAPPRIS ALT2 TSL 5 BASIC7.96□□□□□ -1.14
VPS9D1Q9Y2B5 SMIM31-201ENST00000507311 3123 ntAPPRIS P1 TSL 1 (best) BASIC7.96□□□□□ -1.14
VPS9D1Q9Y2B5 ZBED3-AS1-216ENST00000515356 1987 ntTSL 2 BASIC7.95□□□□□ -1.14
VPS9D1Q9Y2B5 TSC1-201ENST00000298552 8604 ntAPPRIS P1 TSL 1 (best) BASIC7.95□□□□□ -1.14
VPS9D1Q9Y2B5 PLEKHS1-203ENST00000369309 2534 ntTSL 5 BASIC7.95□□□□□ -1.14
VPS9D1Q9Y2B5 MEPE-203ENST00000424957 2022 ntAPPRIS P3 TSL 2 BASIC7.95□□□□□ -1.14
VPS9D1Q9Y2B5 HDAC2-AS2-208ENST00000519104 2016 ntTSL 1 (best) BASIC7.95□□□□□ -1.14
VPS9D1Q9Y2B5 NBPF25P-201ENST00000606775 2019 ntBASIC7.95□□□□□ -1.14
VPS9D1Q9Y2B5 DDX24-211ENST00000640432 2580 ntTSL 5 BASIC7.95□□□□□ -1.14
VPS9D1Q9Y2B5 SMG1P1-202ENST00000309865 4223 ntBASIC7.95□□□□□ -1.14
VPS9D1Q9Y2B5 NPIPB8-202ENST00000529716 2058 ntAPPRIS P1 TSL 5 BASIC7.95□□□□□ -1.14
VPS9D1Q9Y2B5 DHX57-203ENST00000457308 4859 ntAPPRIS P1 TSL 1 (best) BASIC7.95□□□□□ -1.14
VPS9D1Q9Y2B5 FAM120B-203ENST00000537664 3212 ntAPPRIS ALT2 TSL 2 BASIC7.95□□□□□ -1.14
VPS9D1Q9Y2B5 MAGEB18-201ENST00000325250 1811 ntAPPRIS P1 TSL 1 (best) BASIC7.95□□□□□ -1.14
VPS9D1Q9Y2B5 DEFB124-201ENST00000317676 216 ntAPPRIS P1 TSL 1 (best) BASIC7.95□□□□□ -1.14
VPS9D1Q9Y2B5 KRTAP6-2-201ENST00000334897 313 ntAPPRIS P1 BASIC7.95□□□□□ -1.14
VPS9D1Q9Y2B5 DPH5-201ENST00000342173 1143 ntAPPRIS ALT1 TSL 1 (best) BASIC7.95□□□□□ -1.14
VPS9D1Q9Y2B5 Y_RNA.60-201ENST00000362831 98 ntBASIC7.95□□□□□ -1.14
VPS9D1Q9Y2B5 RNU6-777P-201ENST00000364265 104 ntBASIC7.95□□□□□ -1.14
VPS9D1Q9Y2B5 MRPL55-211ENST00000366738 705 ntTSL 1 (best) BASIC7.95□□□□□ -1.14
VPS9D1Q9Y2B5 WFDC6-202ENST00000372670 620 ntTSL 1 (best) BASIC7.95□□□□□ -1.14
VPS9D1Q9Y2B5 Y_RNA.785-201ENST00000384290 109 ntBASIC7.95□□□□□ -1.14
VPS9D1Q9Y2B5 RNU6-310P-201ENST00000384655 107 ntBASIC7.95□□□□□ -1.14
VPS9D1Q9Y2B5 Y_RNA.645-201ENST00000391229 102 ntBASIC7.95□□□□□ -1.14
VPS9D1Q9Y2B5 C2orf88-202ENST00000396974 998 ntAPPRIS P1 TSL 2 BASIC7.95□□□□□ -1.14
VPS9D1Q9Y2B5 OCM-202ENST00000416608 623 ntAPPRIS P1 TSL 5 BASIC7.95□□□□□ -1.14
VPS9D1Q9Y2B5 BOLA3P4-201ENST00000418151 400 ntBASIC7.95□□□□□ -1.14
VPS9D1Q9Y2B5 AL353612.1-201ENST00000428769 465 ntTSL 3 BASIC7.95□□□□□ -1.14
VPS9D1Q9Y2B5 SNRPEP7-201ENST00000438350 220 ntBASIC7.95□□□□□ -1.14
VPS9D1Q9Y2B5 CXCR2P1-202ENST00000443392 1074 ntBASIC7.95□□□□□ -1.14
VPS9D1Q9Y2B5 AL590664.1-201ENST00000448065 339 ntBASIC7.95□□□□□ -1.14
VPS9D1Q9Y2B5 AC002383.1-201ENST00000448260 671 ntTSL 5 BASIC7.95□□□□□ -1.14
VPS9D1Q9Y2B5 EIF4EBP2P1-201ENST00000450009 343 ntBASIC7.95□□□□□ -1.14
VPS9D1Q9Y2B5 AC013275.1-202ENST00000457436 501 ntTSL 3 BASIC7.95□□□□□ -1.14
VPS9D1Q9Y2B5 LINC01510-203ENST00000458082 626 ntTSL 3 BASIC7.95□□□□□ -1.14
VPS9D1Q9Y2B5 SSU72P8-201ENST00000473520 585 ntAPPRIS P1 BASIC7.95□□□□□ -1.14
VPS9D1Q9Y2B5 RPL21P99-201ENST00000480369 423 ntBASIC7.95□□□□□ -1.14
VPS9D1Q9Y2B5 AC008592.1-201ENST00000503091 665 ntTSL 3 BASIC7.95□□□□□ -1.14
VPS9D1Q9Y2B5 AC097473.1-201ENST00000508142 408 ntBASIC7.95□□□□□ -1.14
VPS9D1Q9Y2B5 LEF1-AS1-205ENST00000508286 444 ntTSL 2 BASIC7.95□□□□□ -1.14
VPS9D1Q9Y2B5 AC017091.1-202ENST00000510941 504 ntTSL 3 BASIC7.95□□□□□ -1.14
VPS9D1Q9Y2B5 RNU6-1023P-201ENST00000516137 106 ntBASIC7.95□□□□□ -1.14
VPS9D1Q9Y2B5 RNU6-1088P-201ENST00000516850 104 ntBASIC7.95□□□□□ -1.14
VPS9D1Q9Y2B5 AC040914.1-201ENST00000518674 318 ntTSL 3 BASIC7.95□□□□□ -1.14
VPS9D1Q9Y2B5 LINC01170-201ENST00000519703 406 ntTSL 5 BASIC7.95□□□□□ -1.14
VPS9D1Q9Y2B5 AC022616.6-201ENST00000520479 119 ntBASIC7.95□□□□□ -1.14
VPS9D1Q9Y2B5 IGHVIII-76-1-201ENST00000523776 286 ntBASIC7.95□□□□□ -1.14
VPS9D1Q9Y2B5 MS4A7-208ENST00000530234 730 ntTSL 3 BASIC7.95□□□□□ -1.14
VPS9D1Q9Y2B5 AC007569.1-202ENST00000547282 303 ntTSL 3 BASIC7.95□□□□□ -1.14
VPS9D1Q9Y2B5 AL049780.1-201ENST00000554430 489 ntTSL 3 BASIC7.95□□□□□ -1.14
VPS9D1Q9Y2B5 AC009396.3-201ENST00000555680 354 ntTSL 5 BASIC7.95□□□□□ -1.14
VPS9D1Q9Y2B5 AC068831.4-201ENST00000556118 109 ntBASIC7.95□□□□□ -1.14
VPS9D1Q9Y2B5 RN7SL49P-201ENST00000581392 298 ntBASIC7.95□□□□□ -1.14
VPS9D1Q9Y2B5 AC005387.1-201ENST00000597837 352 ntTSL 3 BASIC7.95□□□□□ -1.14
VPS9D1Q9Y2B5 LINC01125-220ENST00000599501 965 ntAPPRIS ALT2 TSL 5 BASIC7.95□□□□□ -1.14
VPS9D1Q9Y2B5 LINC02086-204ENST00000628006 786 ntTSL 5 BASIC7.95□□□□□ -1.14
VPS9D1Q9Y2B5 AC010149.2-201ENST00000637608 315 ntBASIC7.95□□□□□ -1.14
VPS9D1Q9Y2B5 SLC11A2-202ENST00000262052 4132 ntAPPRIS P3 TSL 1 (best) BASIC7.95□□□□□ -1.14
VPS9D1Q9Y2B5 APBB2-224ENST00000513140 4166 ntAPPRIS P3 TSL 1 (best) BASIC7.95□□□□□ -1.14
VPS9D1Q9Y2B5 AC099792.1-203ENST00000634701 2183 ntTSL 5 BASIC7.95□□□□□ -1.14
VPS9D1Q9Y2B5 NNT-201ENST00000264663 6483 ntAPPRIS P1 TSL 1 (best) BASIC7.95□□□□□ -1.14
VPS9D1Q9Y2B5 CSDE1-214ENST00000530886 3459 ntTSL 5 BASIC7.95□□□□□ -1.14
VPS9D1Q9Y2B5 LINC01085-201ENST00000502759 1984 ntTSL 2 BASIC7.95□□□□□ -1.14
Retrieved 100 of 98,524 protein–RNA pairs in 71.1 ms