Protein–RNA interactions for Protein: Q9P219

CCDC88C, Protein Daple, humanhuman

Predictions only

Length 2,028 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC88CQ9P219 AC084048.1-201ENST00000505494 640 ntTSL 3 BASIC4.86□□□□□ -1.63
CCDC88CQ9P219 AC097110.1-201ENST00000507344 768 ntTSL 2 BASIC4.86□□□□□ -1.63
CCDC88CQ9P219 BTF3P13-201ENST00000513224 490 ntBASIC4.86□□□□□ -1.63
CCDC88CQ9P219 AC006427.1-201ENST00000514359 712 ntBASIC4.86□□□□□ -1.63
CCDC88CQ9P219 RNA5SP230-201ENST00000517039 122 ntBASIC4.86□□□□□ -1.63
CCDC88CQ9P219 AC022884.2-201ENST00000578535 580 ntBASIC4.86□□□□□ -1.63
CCDC88CQ9P219 C18orf32-202ENST00000582392 714 ntAPPRIS P1 TSL 3 BASIC4.86□□□□□ -1.63
CCDC88CQ9P219 MIR6839-201ENST00000620425 113 ntBASIC4.86□□□□□ -1.63
CCDC88CQ9P219 ATRX-202ENST00000395603 10218 ntAPPRIS ALT2 TSL 1 (best) BASIC4.86□□□□□ -1.63
CCDC88CQ9P219 TMLHE-AS1-201ENST00000433624 1702 ntTSL 1 (best) BASIC4.86□□□□□ -1.63
CCDC88CQ9P219 TDO2-208ENST00000536354 1701 ntAPPRIS P1 TSL 1 (best) BASIC4.86□□□□□ -1.63
CCDC88CQ9P219 SPINK5-202ENST00000359874 3656 ntAPPRIS ALT2 TSL 1 (best) BASIC4.86□□□□□ -1.63
CCDC88CQ9P219 TRIM51GP-201ENST00000534741 1350 ntBASIC4.86□□□□□ -1.63
CCDC88CQ9P219 OTUD4-202ENST00000454497 7069 ntTSL 2 BASIC4.86□□□□□ -1.63
CCDC88CQ9P219 FAM196B-201ENST00000377365 2999 ntAPPRIS P1 TSL 2 BASIC4.86□□□□□ -1.63
CCDC88CQ9P219 DCDC1-203ENST00000406071 4758 ntAPPRIS P2 TSL 5 BASIC4.86□□□□□ -1.63
CCDC88CQ9P219 AC104793.1-201ENST00000508189 2840 ntTSL 2 BASIC4.86□□□□□ -1.63
CCDC88CQ9P219 INPP4B-201ENST00000262992 3741 ntAPPRIS P1 TSL 5 BASIC4.86□□□□□ -1.63
CCDC88CQ9P219 TEX26-201ENST00000380473 1478 ntAPPRIS P1 TSL 1 (best) BASIC4.85□□□□□ -1.63
CCDC88CQ9P219 FAS-205ENST00000357339 1044 ntAPPRIS ALT2 TSL 1 (best) BASIC4.85□□□□□ -1.63
CCDC88CQ9P219 SNORA17.1-201ENST00000362945 126 ntBASIC4.85□□□□□ -1.63
CCDC88CQ9P219 AL359378.2-201ENST00000415575 746 ntTSL 2 BASIC4.85□□□□□ -1.63
CCDC88CQ9P219 AC006055.1-201ENST00000432423 411 ntTSL 3 BASIC4.85□□□□□ -1.63
CCDC88CQ9P219 NDUFB4P8-201ENST00000435351 367 ntBASIC4.85□□□□□ -1.63
CCDC88CQ9P219 AL445644.1-201ENST00000436524 751 ntTSL 2 BASIC4.85□□□□□ -1.63
CCDC88CQ9P219 RPS17P2-201ENST00000461663 408 ntBASIC4.85□□□□□ -1.63
CCDC88CQ9P219 AC083982.1-201ENST00000485679 344 ntBASIC4.85□□□□□ -1.63
CCDC88CQ9P219 IGBP1P4-201ENST00000503202 879 ntBASIC4.85□□□□□ -1.63
CCDC88CQ9P219 AC006206.2-202ENST00000537714 648 ntTSL 5 BASIC4.85□□□□□ -1.63
CCDC88CQ9P219 AC104938.1-202ENST00000563041 630 ntTSL 3 BASIC4.85□□□□□ -1.63
CCDC88CQ9P219 MIR4433B-201ENST00000581329 102 ntBASIC4.85□□□□□ -1.63
CCDC88CQ9P219 AC011447.4-201ENST00000587562 111 ntBASIC4.85□□□□□ -1.63
CCDC88CQ9P219 AL109935.2-201ENST00000587737 395 ntTSL 5 BASIC4.85□□□□□ -1.63
CCDC88CQ9P219 AL583832.1-201ENST00000603227 784 ntBASIC4.85□□□□□ -1.63
CCDC88CQ9P219 UQCRC2P1-201ENST00000417777 1332 ntBASIC4.85□□□□□ -1.63
CCDC88CQ9P219 ZBTB8A-202ENST00000373510 7075 ntAPPRIS P1 TSL 1 (best) BASIC4.85□□□□□ -1.63
CCDC88CQ9P219 AC023421.1-201ENST00000590535 1785 ntBASIC4.85□□□□□ -1.63
CCDC88CQ9P219 R3HCC1L-202ENST00000314594 3198 ntAPPRIS P1 TSL 5 BASIC4.85□□□□□ -1.63
CCDC88CQ9P219 DYRK1A-202ENST00000339659 8654 ntTSL 1 (best) BASIC4.85□□□□□ -1.63
CCDC88CQ9P219 SELL-201ENST00000236147 2436 ntAPPRIS P1 TSL 1 (best) BASIC4.85□□□□□ -1.63
CCDC88CQ9P219 PDE7A-201ENST00000379419 2425 ntAPPRIS P3 TSL 2 BASIC4.85□□□□□ -1.63
CCDC88CQ9P219 LINC02302-201ENST00000556405 2904 ntTSL 2 BASIC4.85□□□□□ -1.63
CCDC88CQ9P219 SLC1A3-201ENST00000265113 4170 ntAPPRIS P1 TSL 1 (best) BASIC4.85□□□□□ -1.63
CCDC88CQ9P219 SGO1-202ENST00000306698 1531 ntTSL 1 (best) BASIC4.85□□□□□ -1.63
CCDC88CQ9P219 NAP1L4P1-201ENST00000319092 1157 ntBASIC4.85□□□□□ -1.63
CCDC88CQ9P219 RNU4-2-201ENST00000365668 141 ntBASIC4.85□□□□□ -1.63
CCDC88CQ9P219 SNORA56-201ENST00000383966 129 ntBASIC4.85□□□□□ -1.63
CCDC88CQ9P219 RRM2B-203ENST00000395912 900 ntTSL 1 (best) BASIC4.85□□□□□ -1.63
CCDC88CQ9P219 HMGB3P7-201ENST00000400214 611 ntBASIC4.85□□□□□ -1.63
CCDC88CQ9P219 AL035079.1-201ENST00000405210 287 ntBASIC4.85□□□□□ -1.63
CCDC88CQ9P219 AC114755.2-201ENST00000413520 361 ntBASIC4.85□□□□□ -1.63
CCDC88CQ9P219 AC117434.1-201ENST00000419971 836 ntBASIC4.85□□□□□ -1.63
CCDC88CQ9P219 IL23R-203ENST00000425614 1295 ntTSL 1 (best) BASIC4.85□□□□□ -1.63
CCDC88CQ9P219 LINC02476-202ENST00000431071 559 ntTSL 4 BASIC4.85□□□□□ -1.63
CCDC88CQ9P219 SETP4-201ENST00000455717 868 ntBASIC4.85□□□□□ -1.63
CCDC88CQ9P219 AC073486.1-202ENST00000458437 489 ntTSL 3 BASIC4.85□□□□□ -1.63
CCDC88CQ9P219 AC062004.1-201ENST00000518706 686 ntTSL 3 BASIC4.85□□□□□ -1.63
CCDC88CQ9P219 AC013644.1-202ENST00000523166 499 ntTSL 2 BASIC4.85□□□□□ -1.63
CCDC88CQ9P219 AP000619.2-201ENST00000546014 969 ntBASIC4.85□□□□□ -1.63
CCDC88CQ9P219 MIR4472-2-201ENST00000582069 67 ntBASIC4.85□□□□□ -1.63
CCDC88CQ9P219 AC087283.1-201ENST00000604029 1074 ntBASIC4.85□□□□□ -1.63
CCDC88CQ9P219 AC009027.1-201ENST00000604510 479 ntBASIC4.85□□□□□ -1.63
CCDC88CQ9P219 AC008833.1-201ENST00000611633 691 ntBASIC4.85□□□□□ -1.63
CCDC88CQ9P219 DEC1-204ENST00000614246 210 ntAPPRIS ALT2 TSL 1 (best) BASIC4.85□□□□□ -1.63
CCDC88CQ9P219 PHACTR2P1-202ENST00000636592 773 ntTSL 5 BASIC4.85□□□□□ -1.63
CCDC88CQ9P219 SLC24A2-202ENST00000341998 10749 ntAPPRIS P1 TSL 1 (best) BASIC4.85□□□□□ -1.63
CCDC88CQ9P219 VPS41-203ENST00000395969 3181 ntTSL 5 BASIC4.85□□□□□ -1.63
CCDC88CQ9P219 PGBD4-201ENST00000397766 6612 ntAPPRIS P1 BASIC4.85□□□□□ -1.63
CCDC88CQ9P219 PPEF1-201ENST00000349874 2687 ntTSL 5 BASIC4.85□□□□□ -1.63
CCDC88CQ9P219 GABRG2-202ENST00000361925 3767 ntTSL 3 BASIC4.85□□□□□ -1.63
CCDC88CQ9P219 NAP1L1-204ENST00000535020 1686 ntTSL 2 BASIC4.85□□□□□ -1.63
CCDC88CQ9P219 AC007996.1-201ENST00000620414 2821 ntBASIC4.85□□□□□ -1.63
CCDC88CQ9P219 ADGRG2-203ENST00000356606 4630 ntTSL 1 (best) BASIC4.84□□□□□ -1.63
CCDC88CQ9P219 SEMA6D-210ENST00000558816 4419 ntTSL 5 BASIC4.84□□□□□ -1.63
CCDC88CQ9P219 TTC37-201ENST00000358746 5706 ntAPPRIS P1 TSL 1 (best) BASIC4.84□□□□□ -1.63
CCDC88CQ9P219 HSPA8P14-201ENST00000552265 1805 ntBASIC4.84□□□□□ -1.63
CCDC88CQ9P219 RNA5SP305-201ENST00000362665 119 ntBASIC4.84□□□□□ -1.63
CCDC88CQ9P219 RN7SKP186-201ENST00000365371 303 ntBASIC4.84□□□□□ -1.63
CCDC88CQ9P219 GTF2IP5-201ENST00000414608 731 ntBASIC4.84□□□□□ -1.63
CCDC88CQ9P219 DDX39BP1-205ENST00000422507 192 ntBASIC4.84□□□□□ -1.63
CCDC88CQ9P219 AC104837.2-201ENST00000427236 424 ntBASIC4.84□□□□□ -1.63
CCDC88CQ9P219 AC093414.1-201ENST00000434712 514 ntBASIC4.84□□□□□ -1.63
CCDC88CQ9P219 AC004824.1-201ENST00000439577 311 ntTSL 5 BASIC4.84□□□□□ -1.63
CCDC88CQ9P219 TAS2R39-201ENST00000446620 1017 ntAPPRIS P1 BASIC4.84□□□□□ -1.63
CCDC88CQ9P219 RBMY2TP-201ENST00000451162 947 ntBASIC4.84□□□□□ -1.63
CCDC88CQ9P219 AC093890.1-201ENST00000502554 540 ntBASIC4.84□□□□□ -1.63
CCDC88CQ9P219 AC013701.1-201ENST00000522657 465 ntBASIC4.84□□□□□ -1.63
CCDC88CQ9P219 AC002428.2-201ENST00000522973 414 ntTSL 3 BASIC4.84□□□□□ -1.63
CCDC88CQ9P219 NOP10-202ENST00000557912 436 ntTSL 2 BASIC4.84□□□□□ -1.63
CCDC88CQ9P219 AC087477.3-201ENST00000559214 552 ntTSL 4 BASIC4.84□□□□□ -1.63
CCDC88CQ9P219 VDAC1P8-204ENST00000589489 997 ntTSL 5 BASIC4.84□□□□□ -1.63
CCDC88CQ9P219 MYBPC1-202ENST00000361685 3871 ntAPPRIS ALT2 TSL 1 (best) BASIC4.84□□□□□ -1.63
CCDC88CQ9P219 TRPC4-203ENST00000358477 2955 ntTSL 1 (best) BASIC4.84□□□□□ -1.63
CCDC88CQ9P219 PLCH1-AS1-201ENST00000475196 1308 ntTSL 1 (best) BASIC4.84□□□□□ -1.63
CCDC88CQ9P219 MAP3K7-201ENST00000369320 3328 ntTSL 5 BASIC4.84□□□□□ -1.63
CCDC88CQ9P219 AC090826.1-202ENST00000562009 3337 ntTSL 1 (best) BASIC4.84□□□□□ -1.63
CCDC88CQ9P219 AL672167.1-204ENST00000641875 3017 ntBASIC4.84□□□□□ -1.63
CCDC88CQ9P219 DCTN4-201ENST00000424236 4054 ntTSL 2 BASIC4.84□□□□□ -1.63
CCDC88CQ9P219 ARHGEF6-203ENST00000370622 4779 ntTSL 1 (best) BASIC4.84□□□□□ -1.63
CCDC88CQ9P219 DOCK9-207ENST00000442173 7643 ntAPPRIS ALT2 TSL 5 BASIC4.84□□□□□ -1.63
Retrieved 100 of 98,524 protein–RNA pairs in 70.8 ms