Protein–RNA interactions for Protein: Q9NWM3

CUEDC1, CUE domain-containing protein 1, humanhuman

Predicted RBP Predictions only

Length 386 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CUEDC1Q9NWM3 RNA5SP96-201ENST00000516041 107 ntBASIC7.24□□□□□ -1.25
CUEDC1Q9NWM3 IGKV1D-32-201ENST00000517449 318 ntBASIC7.24□□□□□ -1.25
CUEDC1Q9NWM3 LINC02055-204ENST00000521034 432 ntTSL 5 BASIC7.24□□□□□ -1.25
CUEDC1Q9NWM3 AC022695.3-201ENST00000523385 478 ntTSL 3 BASIC7.24□□□□□ -1.25
CUEDC1Q9NWM3 AP005597.4-201ENST00000526762 229 ntBASIC7.24□□□□□ -1.25
CUEDC1Q9NWM3 AC134775.1-201ENST00000531268 464 ntTSL 2 BASIC7.24□□□□□ -1.25
CUEDC1Q9NWM3 AC006518.2-202ENST00000544947 297 ntTSL 2 BASIC7.24□□□□□ -1.25
CUEDC1Q9NWM3 AC092868.2-201ENST00000558749 497 ntTSL 3 BASIC7.24□□□□□ -1.25
CUEDC1Q9NWM3 NIFKP8-201ENST00000560500 874 ntBASIC7.24□□□□□ -1.25
CUEDC1Q9NWM3 AC009120.4-201ENST00000564455 513 ntTSL 5 BASIC7.24□□□□□ -1.25
CUEDC1Q9NWM3 LINC01904-201ENST00000564872 861 ntTSL 1 (best) BASIC7.24□□□□□ -1.25
CUEDC1Q9NWM3 IGHV1OR15-3-201ENST00000564926 351 ntBASIC7.24□□□□□ -1.25
CUEDC1Q9NWM3 PPP4R1-AS1-201ENST00000582435 379 ntTSL 2 BASIC7.24□□□□□ -1.25
CUEDC1Q9NWM3 AC103987.2-201ENST00000583436 417 ntTSL 2 BASIC7.24□□□□□ -1.25
CUEDC1Q9NWM3 AC233702.6-201ENST00000584594 396 ntTSL 3 BASIC7.24□□□□□ -1.25
CUEDC1Q9NWM3 AC007001.1-201ENST00000590912 670 ntTSL 5 BASIC7.24□□□□□ -1.25
CUEDC1Q9NWM3 SSX2B-202ENST00000596480 1291 ntAPPRIS P1 TSL 1 (best) BASIC7.24□□□□□ -1.25
CUEDC1Q9NWM3 SNX29P2-204ENST00000603801 875 ntBASIC7.24□□□□□ -1.25
CUEDC1Q9NWM3 AL390058.1-201ENST00000603834 629 ntBASIC7.24□□□□□ -1.25
CUEDC1Q9NWM3 AC008250.2-201ENST00000615261 205 ntBASIC7.24□□□□□ -1.25
CUEDC1Q9NWM3 ZNF75A-210ENST00000617839 1225 ntAPPRIS P1 TSL 1 (best) BASIC7.24□□□□□ -1.25
CUEDC1Q9NWM3 CCL14-202ENST00000618404 898 ntAPPRIS P1 TSL 1 (best) BASIC7.24□□□□□ -1.25
CUEDC1Q9NWM3 AC092683.2-203ENST00000618807 788 ntTSL 5 BASIC7.24□□□□□ -1.25
CUEDC1Q9NWM3 AC005858.4-201ENST00000623191 700 ntBASIC7.24□□□□□ -1.25
CUEDC1Q9NWM3 AC093909.6-201ENST00000624757 775 ntBASIC7.24□□□□□ -1.25
CUEDC1Q9NWM3 AJ009632.2-209ENST00000634853 933 ntTSL 5 BASIC7.24□□□□□ -1.25
CUEDC1Q9NWM3 NBPF19-206ENST00000621744 14425 ntTSL 5 BASIC7.24□□□□□ -1.25
CUEDC1Q9NWM3 OPALIN-202ENST00000393870 3578 ntTSL 3 BASIC7.24□□□□□ -1.25
CUEDC1Q9NWM3 CS-201ENST00000351328 2975 ntAPPRIS P2 TSL 1 (best) BASIC7.24□□□□□ -1.25
CUEDC1Q9NWM3 RBM44-206ENST00000611254 1427 ntTSL 2 BASIC7.24□□□□□ -1.25
CUEDC1Q9NWM3 AC098679.1-203ENST00000505532 2227 ntTSL 2 BASIC7.24□□□□□ -1.25
CUEDC1Q9NWM3 MTMR8-201ENST00000374852 2639 ntAPPRIS P1 TSL 1 (best) BASIC7.24□□□□□ -1.25
CUEDC1Q9NWM3 KYNU-203ENST00000409512 1576 ntAPPRIS P1 TSL 1 (best) BASIC7.24□□□□□ -1.25
CUEDC1Q9NWM3 AL136298.2-201ENST00000556497 1570 ntBASIC7.24□□□□□ -1.25
CUEDC1Q9NWM3 AC011525.1-201ENST00000562167 5676 ntTSL 1 (best) BASIC7.24□□□□□ -1.25
CUEDC1Q9NWM3 RBMXL1-201ENST00000321792 4799 ntAPPRIS P1 TSL 1 (best) BASIC7.24□□□□□ -1.25
CUEDC1Q9NWM3 LINC01095-202ENST00000507726 1715 ntTSL 2 BASIC7.24□□□□□ -1.25
CUEDC1Q9NWM3 NUP93-202ENST00000542526 8257 ntTSL 2 BASIC7.24□□□□□ -1.25
CUEDC1Q9NWM3 IL6ST-212ENST00000522633 1878 ntTSL 1 (best) BASIC7.24□□□□□ -1.25
CUEDC1Q9NWM3 AC100871.1-201ENST00000507871 1456 ntBASIC7.24□□□□□ -1.25
CUEDC1Q9NWM3 NF1-201ENST00000356175 12362 ntAPPRIS P3 TSL 1 (best) BASIC7.23□□□□□ -1.25
CUEDC1Q9NWM3 NLRC4-204ENST00000404025 3581 ntAPPRIS P1 TSL 5 BASIC7.23□□□□□ -1.25
CUEDC1Q9NWM3 EEF1A1P5-201ENST00000436459 1389 ntBASIC7.23□□□□□ -1.25
CUEDC1Q9NWM3 PARD3-212ENST00000544292 2475 ntTSL 1 (best) BASIC7.23□□□□□ -1.25
CUEDC1Q9NWM3 ITSN1-206ENST00000381318 17015 ntAPPRIS P3 TSL 1 (best) BASIC7.23□□□□□ -1.25
CUEDC1Q9NWM3 ZNF841-202ENST00000426391 3620 ntTSL 2 BASIC7.23□□□□□ -1.25
CUEDC1Q9NWM3 ESRRG-221ENST00000493603 5304 ntAPPRIS P1 TSL 1 (best) BASIC7.23□□□□□ -1.25
CUEDC1Q9NWM3 BIRC6-201ENST00000421745 15703 ntAPPRIS P1 TSL 1 (best) BASIC7.23□□□□□ -1.25
CUEDC1Q9NWM3 ZNF474-201ENST00000296600 1964 ntAPPRIS P1 TSL 1 (best) BASIC7.23□□□□□ -1.25
CUEDC1Q9NWM3 MSR1-204ENST00000381998 2826 ntTSL 1 (best) BASIC7.23□□□□□ -1.25
CUEDC1Q9NWM3 STARD6-201ENST00000307844 663 ntAPPRIS P1 TSL 1 (best) BASIC7.23□□□□□ -1.25
CUEDC1Q9NWM3 Y_RNA.202-201ENST00000364083 110 ntBASIC7.23□□□□□ -1.25
CUEDC1Q9NWM3 SNORA4.3-201ENST00000365564 137 ntBASIC7.23□□□□□ -1.25
CUEDC1Q9NWM3 NDRG3-204ENST00000373803 2978 ntTSL 5 BASIC7.23□□□□□ -1.25
CUEDC1Q9NWM3 FABP9-201ENST00000379071 497 ntAPPRIS P1 TSL 2 BASIC7.23□□□□□ -1.25
CUEDC1Q9NWM3 RNU6-1103P-201ENST00000384150 107 ntBASIC7.23□□□□□ -1.25
CUEDC1Q9NWM3 RNU6-196P-201ENST00000384315 107 ntBASIC7.23□□□□□ -1.25
CUEDC1Q9NWM3 TRGV11-201ENST00000390340 463 ntAPPRIS P1 BASIC7.23□□□□□ -1.25
CUEDC1Q9NWM3 ISY1-202ENST00000393292 988 ntTSL 5 BASIC7.23□□□□□ -1.25
CUEDC1Q9NWM3 RPL7-203ENST00000396466 762 ntTSL 3 BASIC7.23□□□□□ -1.25
CUEDC1Q9NWM3 HMGB3P7-201ENST00000400214 611 ntBASIC7.23□□□□□ -1.25
CUEDC1Q9NWM3 AL355375.1-201ENST00000405686 392 ntBASIC7.23□□□□□ -1.25
CUEDC1Q9NWM3 SNORA2C-201ENST00000408564 137 ntBASIC7.23□□□□□ -1.25
CUEDC1Q9NWM3 LINC00222-203ENST00000416890 602 ntTSL 1 (best) BASIC7.23□□□□□ -1.25
CUEDC1Q9NWM3 HMGB3P20-201ENST00000417997 600 ntBASIC7.23□□□□□ -1.25
CUEDC1Q9NWM3 AL078581.1-201ENST00000419134 340 ntTSL 5 BASIC7.23□□□□□ -1.25
CUEDC1Q9NWM3 LINC01362-201ENST00000419658 338 ntTSL 5 BASIC7.23□□□□□ -1.25
CUEDC1Q9NWM3 LINC01031-201ENST00000420807 779 ntTSL 3 BASIC7.23□□□□□ -1.25
CUEDC1Q9NWM3 RIMKLBP2-201ENST00000424737 654 ntBASIC7.23□□□□□ -1.25
CUEDC1Q9NWM3 AL773545.1-201ENST00000425632 347 ntTSL 5 BASIC7.23□□□□□ -1.25
CUEDC1Q9NWM3 USP9YP16-201ENST00000430287 407 ntBASIC7.23□□□□□ -1.25
CUEDC1Q9NWM3 AL136234.1-201ENST00000437080 349 ntTSL 2 BASIC7.23□□□□□ -1.25
CUEDC1Q9NWM3 AL022237.1-201ENST00000446663 358 ntBASIC7.23□□□□□ -1.25
CUEDC1Q9NWM3 TTTY19-201ENST00000453955 269 ntTSL 1 (best) BASIC7.23□□□□□ -1.25
CUEDC1Q9NWM3 USP9YP23-201ENST00000455085 407 ntBASIC7.23□□□□□ -1.25
CUEDC1Q9NWM3 ARPC3P2-201ENST00000457786 533 ntBASIC7.23□□□□□ -1.25
CUEDC1Q9NWM3 RNU7-27P-201ENST00000459281 62 ntBASIC7.23□□□□□ -1.25
CUEDC1Q9NWM3 KCNIP2-211ENST00000461105 858 ntTSL 1 (best) BASIC7.23□□□□□ -1.25
CUEDC1Q9NWM3 LINC00881-201ENST00000467995 589 ntTSL 4 BASIC7.23□□□□□ -1.25
CUEDC1Q9NWM3 AC015820.1-201ENST00000473882 321 ntBASIC7.23□□□□□ -1.25
CUEDC1Q9NWM3 AC069528.1-201ENST00000490344 705 ntTSL 3 BASIC7.23□□□□□ -1.25
CUEDC1Q9NWM3 AC082650.1-201ENST00000503542 575 ntTSL 4 BASIC7.23□□□□□ -1.25
CUEDC1Q9NWM3 AC021146.2-201ENST00000504736 556 ntBASIC7.23□□□□□ -1.25
CUEDC1Q9NWM3 AC108159.1-201ENST00000505408 489 ntTSL 3 BASIC7.23□□□□□ -1.25
CUEDC1Q9NWM3 AC095059.2-201ENST00000510601 933 ntBASIC7.23□□□□□ -1.25
CUEDC1Q9NWM3 SEMA6A-AS1-204ENST00000510682 521 ntTSL 5 BASIC7.23□□□□□ -1.25
CUEDC1Q9NWM3 AC010493.1-201ENST00000513479 292 ntBASIC7.23□□□□□ -1.25
CUEDC1Q9NWM3 PRR13-204ENST00000547368 688 ntAPPRIS ALT2 TSL 3 BASIC7.23□□□□□ -1.25
CUEDC1Q9NWM3 AC069240.2-201ENST00000550242 609 ntBASIC7.23□□□□□ -1.25
CUEDC1Q9NWM3 TIMM9-205ENST00000555404 430 ntAPPRIS P1 TSL 1 (best) BASIC7.23□□□□□ -1.25
CUEDC1Q9NWM3 AC092142.1-202ENST00000567021 829 ntTSL 5 BASIC7.23□□□□□ -1.25
CUEDC1Q9NWM3 FOPNL-205ENST00000573429 646 ntTSL 3 BASIC7.23□□□□□ -1.25
CUEDC1Q9NWM3 BNIP3P23-201ENST00000599655 511 ntBASIC7.23□□□□□ -1.25
CUEDC1Q9NWM3 OR7E94P-202ENST00000601375 790 ntBASIC7.23□□□□□ -1.25
CUEDC1Q9NWM3 AL136363.1-201ENST00000605349 337 ntBASIC7.23□□□□□ -1.25
CUEDC1Q9NWM3 AC097717.1-249ENST00000608040 401 ntTSL 5 BASIC7.23□□□□□ -1.25
CUEDC1Q9NWM3 AC004908.2-201ENST00000609090 574 ntBASIC7.23□□□□□ -1.25
CUEDC1Q9NWM3 HUWE1-203ENST00000342160 14796 ntAPPRIS P1 TSL 5 BASIC7.23□□□□□ -1.25
CUEDC1Q9NWM3 POLA1-201ENST00000379059 5440 ntAPPRIS P3 TSL 1 (best) BASIC7.23□□□□□ -1.25
CUEDC1Q9NWM3 POLA1-206ENST00000611764 5434 ntAPPRIS ALT2 TSL 5 BASIC7.23□□□□□ -1.25
Retrieved 100 of 98,524 protein–RNA pairs in 76.2 ms