Protein–RNA interactions for Protein: Q9H9A6

LRRC40, Leucine-rich repeat-containing protein 40, humanhuman

Predictions only

Length 602 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC40Q9H9A6 CDK15-204ENST00000450471 3659 ntAPPRIS ALT1 TSL 1 (best) BASIC5.28□□□□□ -1.56
LRRC40Q9H9A6 LINC01317-201ENST00000366209 779 ntTSL 5 BASIC5.28□□□□□ -1.56
LRRC40Q9H9A6 DEFB136-201ENST00000382209 237 ntAPPRIS P1 TSL 1 (best) BASIC5.28□□□□□ -1.56
LRRC40Q9H9A6 IGLV5-48-201ENST00000390293 369 ntAPPRIS P1 BASIC5.28□□□□□ -1.56
LRRC40Q9H9A6 ZSCAN12P1-201ENST00000406489 419 ntBASIC5.28□□□□□ -1.56
LRRC40Q9H9A6 OR51A6P-201ENST00000418680 1004 ntBASIC5.28□□□□□ -1.56
LRRC40Q9H9A6 AC009238.2-201ENST00000431026 355 ntBASIC5.28□□□□□ -1.56
LRRC40Q9H9A6 OR6C71P-201ENST00000432580 913 ntBASIC5.28□□□□□ -1.56
LRRC40Q9H9A6 HMGB3P10-201ENST00000434734 572 ntBASIC5.28□□□□□ -1.56
LRRC40Q9H9A6 GYPE-202ENST00000437468 499 ntAPPRIS P1 TSL 1 (best) BASIC5.28□□□□□ -1.56
LRRC40Q9H9A6 RPS29P10-201ENST00000439197 166 ntBASIC5.28□□□□□ -1.56
LRRC40Q9H9A6 FOCAD-AS1-201ENST00000439876 359 ntTSL 2 BASIC5.28□□□□□ -1.56
LRRC40Q9H9A6 PCNPP2-201ENST00000441651 455 ntBASIC5.28□□□□□ -1.56
LRRC40Q9H9A6 RPS26P41-201ENST00000450370 284 ntBASIC5.28□□□□□ -1.56
LRRC40Q9H9A6 AL359265.3-201ENST00000456125 579 ntTSL 5 BASIC5.28□□□□□ -1.56
LRRC40Q9H9A6 MTCYBP14-201ENST00000457471 715 ntBASIC5.28□□□□□ -1.56
LRRC40Q9H9A6 AC092590.1-201ENST00000471672 737 ntTSL 3 BASIC5.28□□□□□ -1.56
LRRC40Q9H9A6 SEC22A-207ENST00000481965 673 ntTSL 3 BASIC5.28□□□□□ -1.56
LRRC40Q9H9A6 COX6B1P2-201ENST00000489624 230 ntBASIC5.28□□□□□ -1.56
LRRC40Q9H9A6 RPL7P51-201ENST00000490532 749 ntBASIC5.28□□□□□ -1.56
LRRC40Q9H9A6 AL133372.1-201ENST00000493565 745 ntBASIC5.28□□□□□ -1.56
LRRC40Q9H9A6 NIFKP7-201ENST00000503365 834 ntBASIC5.28□□□□□ -1.56
LRRC40Q9H9A6 LINC01365-202ENST00000512219 637 ntTSL 5 BASIC5.28□□□□□ -1.56
LRRC40Q9H9A6 AC106732.1-201ENST00000512458 550 ntTSL 4 BASIC5.28□□□□□ -1.56
LRRC40Q9H9A6 RNA5SP362-201ENST00000516048 118 ntBASIC5.28□□□□□ -1.56
LRRC40Q9H9A6 AP002518.1-201ENST00000534904 3837 ntTSL 1 (best) BASIC5.28□□□□□ -1.56
LRRC40Q9H9A6 CA1-224ENST00000542576 1236 ntAPPRIS P1 TSL 5 BASIC5.28□□□□□ -1.56
LRRC40Q9H9A6 AC144548.2-201ENST00000550231 946 ntTSL 3 BASIC5.28□□□□□ -1.56
LRRC40Q9H9A6 AC009554.1-201ENST00000559251 399 ntTSL 5 BASIC5.28□□□□□ -1.56
LRRC40Q9H9A6 LINC01243-201ENST00000562065 721 ntTSL 1 (best) BASIC5.28□□□□□ -1.56
LRRC40Q9H9A6 AC003991.1-201ENST00000594469 484 ntTSL 5 BASIC5.28□□□□□ -1.56
LRRC40Q9H9A6 GMFG-202ENST00000594700 397 ntTSL 2 BASIC5.28□□□□□ -1.56
LRRC40Q9H9A6 AC069307.1-201ENST00000602820 447 ntBASIC5.28□□□□□ -1.56
LRRC40Q9H9A6 AL137246.1-201ENST00000607072 977 ntBASIC5.28□□□□□ -1.56
LRRC40Q9H9A6 AL135786.2-201ENST00000608422 615 ntBASIC5.28□□□□□ -1.56
LRRC40Q9H9A6 AP005131.7-201ENST00000610087 611 ntBASIC5.28□□□□□ -1.56
LRRC40Q9H9A6 AC079395.2-201ENST00000610982 737 ntBASIC5.28□□□□□ -1.56
LRRC40Q9H9A6 AL359513.1-201ENST00000614364 557 ntBASIC5.28□□□□□ -1.56
LRRC40Q9H9A6 PCDHB2-203ENST00000624874 565 ntTSL 5 BASIC5.28□□□□□ -1.56
LRRC40Q9H9A6 CYP4F35P-202ENST00000636121 390 ntBASIC5.28□□□□□ -1.56
LRRC40Q9H9A6 AC135068.12-201ENST00000637370 931 ntBASIC5.28□□□□□ -1.56
LRRC40Q9H9A6 STARD9-201ENST00000290607 15567 ntAPPRIS P1 TSL 5 BASIC5.28□□□□□ -1.56
LRRC40Q9H9A6 HEATR5A-203ENST00000543095 7840 ntAPPRIS P1 TSL 5 BASIC5.28□□□□□ -1.56
LRRC40Q9H9A6 AL022322.2-201ENST00000624072 20397 ntBASIC5.28□□□□□ -1.56
LRRC40Q9H9A6 AC007491.1-202ENST00000637961 1576 ntTSL 5 BASIC5.28□□□□□ -1.56
LRRC40Q9H9A6 MYO3A-203ENST00000376302 2723 ntTSL 1 (best) BASIC5.28□□□□□ -1.56
LRRC40Q9H9A6 GAS2L3-203ENST00000539410 2229 ntAPPRIS P1 TSL 2 BASIC5.28□□□□□ -1.56
LRRC40Q9H9A6 ZNF429-209ENST00000618549 1889 ntTSL 5 BASIC5.28□□□□□ -1.56
LRRC40Q9H9A6 STXBP4-202ENST00000398391 2160 ntTSL 1 (best) BASIC5.28□□□□□ -1.56
LRRC40Q9H9A6 CYP4Z2P-201ENST00000423332 1512 ntBASIC5.28□□□□□ -1.56
LRRC40Q9H9A6 PCDH15-206ENST00000373965 9237 ntAPPRIS ALT2 TSL 5 BASIC5.28□□□□□ -1.56
LRRC40Q9H9A6 HEMGN-202ENST00000616898 2305 ntAPPRIS P1 TSL 1 (best) BASIC5.28□□□□□ -1.56
LRRC40Q9H9A6 AC073136.1-201ENST00000449426 2884 ntBASIC5.27□□□□□ -1.57
LRRC40Q9H9A6 OAZ3-204ENST00000479764 3789 ntTSL 5 BASIC5.27□□□□□ -1.57
LRRC40Q9H9A6 NBPF10-202ENST00000617010 11630 ntTSL 5 BASIC5.27□□□□□ -1.57
LRRC40Q9H9A6 PTPRO-204ENST00000445537 4062 ntAPPRIS ALT2 TSL 2 BASIC5.27□□□□□ -1.57
LRRC40Q9H9A6 IREB2-201ENST00000258886 6354 ntAPPRIS P1 TSL 1 (best) BASIC5.27□□□□□ -1.57
LRRC40Q9H9A6 AL445623.2-201ENST00000640307 4805 ntTSL 1 (best) BASIC5.27□□□□□ -1.57
LRRC40Q9H9A6 AC083843.2-201ENST00000568248 6253 ntBASIC5.27□□□□□ -1.57
LRRC40Q9H9A6 DCX-202ENST00000358070 9405 ntAPPRIS ALT1 TSL 1 (best) BASIC5.27□□□□□ -1.57
LRRC40Q9H9A6 U3.3-201ENST00000362986 216 ntBASIC5.27□□□□□ -1.57
LRRC40Q9H9A6 OR51B6-201ENST00000380219 939 ntAPPRIS P1 BASIC5.27□□□□□ -1.57
LRRC40Q9H9A6 AL390316.1-201ENST00000406279 553 ntBASIC5.27□□□□□ -1.57
LRRC40Q9H9A6 AL390036.1-201ENST00000419428 734 ntTSL 5 BASIC5.27□□□□□ -1.57
LRRC40Q9H9A6 AL592078.1-201ENST00000421866 321 ntTSL 3 BASIC5.27□□□□□ -1.57
LRRC40Q9H9A6 AL139002.1-201ENST00000435281 902 ntTSL 5 BASIC5.27□□□□□ -1.57
LRRC40Q9H9A6 SPRYD7P1-201ENST00000443861 570 ntBASIC5.27□□□□□ -1.57
LRRC40Q9H9A6 AL049552.1-201ENST00000444302 577 ntTSL 2 BASIC5.27□□□□□ -1.57
LRRC40Q9H9A6 RPL7AP10-201ENST00000481016 791 ntBASIC5.27□□□□□ -1.57
LRRC40Q9H9A6 AC108693.1-201ENST00000496068 432 ntBASIC5.27□□□□□ -1.57
LRRC40Q9H9A6 USP9YP2-201ENST00000504503 1000 ntBASIC5.27□□□□□ -1.57
LRRC40Q9H9A6 RPS4XP20-201ENST00000505751 772 ntBASIC5.27□□□□□ -1.57
LRRC40Q9H9A6 AC097173.1-201ENST00000505862 819 ntBASIC5.27□□□□□ -1.57
LRRC40Q9H9A6 USP9YP1-201ENST00000513521 1002 ntBASIC5.27□□□□□ -1.57
LRRC40Q9H9A6 BAALC-AS1-205ENST00000521102 613 ntTSL 3 BASIC5.27□□□□□ -1.57
LRRC40Q9H9A6 TAS2R46-201ENST00000533467 930 ntAPPRIS P1 BASIC5.27□□□□□ -1.57
LRRC40Q9H9A6 AL139022.1-201ENST00000556127 486 ntTSL 5 BASIC5.27□□□□□ -1.57
LRRC40Q9H9A6 AC115989.2-201ENST00000578640 563 ntBASIC5.27□□□□□ -1.57
LRRC40Q9H9A6 AC015802.3-201ENST00000590241 570 ntTSL 4 BASIC5.27□□□□□ -1.57
LRRC40Q9H9A6 AC022098.3-201ENST00000590715 315 ntTSL 3 BASIC5.27□□□□□ -1.57
LRRC40Q9H9A6 AL122125.1-201ENST00000616999 600 ntBASIC5.27□□□□□ -1.57
LRRC40Q9H9A6 RBPJP2-201ENST00000618187 1444 ntBASIC5.27□□□□□ -1.57
LRRC40Q9H9A6 ELF1-204ENST00000625359 2032 ntTSL 2 BASIC5.27□□□□□ -1.57
LRRC40Q9H9A6 LINC01338-201ENST00000627179 632 ntTSL 3 BASIC5.27□□□□□ -1.57
LRRC40Q9H9A6 LINC01708-202ENST00000634316 859 ntTSL 5 BASIC5.27□□□□□ -1.57
LRRC40Q9H9A6 TMEM154-201ENST00000304385 10698 ntAPPRIS P2 TSL 1 (best) BASIC5.27□□□□□ -1.57
LRRC40Q9H9A6 LRIT3-201ENST00000327908 3781 ntTSL 2 BASIC5.27□□□□□ -1.57
LRRC40Q9H9A6 SMC2-AS1-201ENST00000603487 7020 ntTSL 2 BASIC5.27□□□□□ -1.57
LRRC40Q9H9A6 BBX-206ENST00000415149 8930 ntAPPRIS P3 TSL 1 (best) BASIC5.27□□□□□ -1.57
LRRC40Q9H9A6 CDC16-202ENST00000252458 1991 ntTSL 1 (best) BASIC5.27□□□□□ -1.57
LRRC40Q9H9A6 MTCO1P22-201ENST00000604619 1360 ntBASIC5.27□□□□□ -1.57
LRRC40Q9H9A6 ARHGEF6-203ENST00000370622 4779 ntTSL 1 (best) BASIC5.27□□□□□ -1.57
LRRC40Q9H9A6 AC087257.1-201ENST00000506925 2639 ntTSL 4 BASIC5.27□□□□□ -1.57
LRRC40Q9H9A6 R3HCC1L-202ENST00000314594 3198 ntAPPRIS P1 TSL 5 BASIC5.26□□□□□ -1.57
LRRC40Q9H9A6 OR8J2-201ENST00000641465 2883 ntAPPRIS P1 BASIC5.26□□□□□ -1.57
LRRC40Q9H9A6 CLCA3P-201ENST00000284054 2407 ntTSL 5 BASIC5.26□□□□□ -1.57
LRRC40Q9H9A6 DNAJC16-210ENST00000616884 5882 ntTSL 1 (best) BASIC5.26□□□□□ -1.57
LRRC40Q9H9A6 AC097461.1-201ENST00000568928 2821 ntBASIC5.26□□□□□ -1.57
LRRC40Q9H9A6 BX088651.2-201ENST00000425493 3614 ntTSL 2 BASIC5.26□□□□□ -1.57
LRRC40Q9H9A6 MAK-203ENST00000474039 3859 ntAPPRIS P1 TSL 1 (best) BASIC5.26□□□□□ -1.57
Retrieved 100 of 98,524 protein–RNA pairs in 104.1 ms