Protein–RNA interactions for Protein: Q96M83

CCDC7, Coiled-coil domain-containing protein 7, humanhuman

Predictions only

Length 1,385 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC7Q96M83 CRISP1-201ENST00000329411 1709 ntTSL 5 BASIC7.09□□□□□ -1.27
CCDC7Q96M83 AC090826.1-202ENST00000562009 3337 ntTSL 1 (best) BASIC7.09□□□□□ -1.28
CCDC7Q96M83 SMG1P3-204ENST00000520823 3194 ntTSL 5 BASIC7.09□□□□□ -1.28
CCDC7Q96M83 NCOA3-203ENST00000372004 7939 ntAPPRIS ALT2 TSL 1 (best) BASIC7.09□□□□□ -1.28
CCDC7Q96M83 ELAVL4-205ENST00000371824 3966 ntAPPRIS P5 TSL 1 (best) BASIC7.08□□□□□ -1.28
CCDC7Q96M83 IKZF2-207ENST00000434687 3888 ntAPPRIS P2 TSL 5 BASIC7.08□□□□□ -1.28
CCDC7Q96M83 SH3BGR-203ENST00000380634 816 ntTSL 5 BASIC7.08□□□□□ -1.28
CCDC7Q96M83 RPS29P9-201ENST00000440360 171 ntBASIC7.08□□□□□ -1.28
CCDC7Q96M83 AL354794.1-201ENST00000442103 516 ntTSL 3 BASIC7.08□□□□□ -1.28
CCDC7Q96M83 AL353152.1-201ENST00000455973 470 ntTSL 5 BASIC7.08□□□□□ -1.28
CCDC7Q96M83 DAP3-209ENST00000465375 729 ntTSL 2 BASIC7.08□□□□□ -1.28
CCDC7Q96M83 AC000372.1-201ENST00000488818 646 ntTSL 2 BASIC7.08□□□□□ -1.28
CCDC7Q96M83 RN7SL441P-201ENST00000492388 296 ntBASIC7.08□□□□□ -1.28
CCDC7Q96M83 ENPP7P11-201ENST00000505915 627 ntBASIC7.08□□□□□ -1.28
CCDC7Q96M83 AC020551.1-201ENST00000512036 539 ntTSL 3 BASIC7.08□□□□□ -1.28
CCDC7Q96M83 AL359219.2-201ENST00000555184 348 ntBASIC7.08□□□□□ -1.28
CCDC7Q96M83 AC112693.1-201ENST00000555297 682 ntTSL 3 BASIC7.08□□□□□ -1.28
CCDC7Q96M83 AC079075.1-201ENST00000559543 878 ntBASIC7.08□□□□□ -1.28
CCDC7Q96M83 AP005059.1-201ENST00000578391 456 ntTSL 2 BASIC7.08□□□□□ -1.28
CCDC7Q96M83 AC087283.1-201ENST00000604029 1074 ntBASIC7.08□□□□□ -1.28
CCDC7Q96M83 AL731566.2-201ENST00000618971 317 ntBASIC7.08□□□□□ -1.28
CCDC7Q96M83 RNF123-214ENST00000629802 207 ntTSL 5 BASIC7.08□□□□□ -1.28
CCDC7Q96M83 CLCA1-202ENST00000394711 3118 ntAPPRIS P1 TSL 1 (best) BASIC7.08□□□□□ -1.28
CCDC7Q96M83 ANK2-226ENST00000612754 6134 ntTSL 5 BASIC7.08□□□□□ -1.28
CCDC7Q96M83 ZNF23-207ENST00000564528 3020 ntAPPRIS ALT2 TSL 2 BASIC7.08□□□□□ -1.28
CCDC7Q96M83 OR3A3-203ENST00000641141 3800 ntAPPRIS P1 BASIC7.08□□□□□ -1.28
CCDC7Q96M83 FZD6-205ENST00000522566 3719 ntAPPRIS P1 TSL 1 (best) BASIC7.08□□□□□ -1.28
CCDC7Q96M83 DOPEY1-201ENST00000237163 7995 ntAPPRIS ALT1 TSL 5 BASIC7.08□□□□□ -1.28
CCDC7Q96M83 PEX26-201ENST00000329627 18445 ntAPPRIS P1 TSL 1 (best) BASIC7.08□□□□□ -1.28
CCDC7Q96M83 RNF182-207ENST00000537663 3382 ntAPPRIS P1 TSL 4 BASIC7.08□□□□□ -1.28
CCDC7Q96M83 GPHN-204ENST00000543237 2459 ntTSL 2 BASIC7.08□□□□□ -1.28
CCDC7Q96M83 C3orf67-AS1-202ENST00000482372 2203 ntTSL 2 BASIC7.08□□□□□ -1.28
CCDC7Q96M83 MAP3K2-201ENST00000344908 2135 ntAPPRIS P1 TSL 1 (best) BASIC7.08□□□□□ -1.28
CCDC7Q96M83 CRB1-203ENST00000367400 4932 ntAPPRIS P1 TSL 1 (best) BASIC7.08□□□□□ -1.28
CCDC7Q96M83 WDPCP-202ENST00000398544 2063 ntAPPRIS ALT2 TSL 1 (best) BASIC7.08□□□□□ -1.28
CCDC7Q96M83 KTN1-202ENST00000395308 4134 ntAPPRIS ALT2 TSL 1 (best) BASIC7.08□□□□□ -1.28
CCDC7Q96M83 KCNAB1-205ENST00000471742 3301 ntTSL 1 (best) BASIC7.08□□□□□ -1.28
CCDC7Q96M83 EPGN-201ENST00000332112 847 ntTSL 1 (best) BASIC7.08□□□□□ -1.28
CCDC7Q96M83 RN7SKP149-201ENST00000363008 344 ntBASIC7.08□□□□□ -1.28
CCDC7Q96M83 COX7B2-202ENST00000396533 617 ntAPPRIS P2 TSL 1 (best) BASIC7.08□□□□□ -1.28
CCDC7Q96M83 AL590609.3-201ENST00000411815 210 ntTSL 3 BASIC7.08□□□□□ -1.28
CCDC7Q96M83 LINC01945-201ENST00000419784 840 ntTSL 2 BASIC7.08□□□□□ -1.28
CCDC7Q96M83 ITGA9-AS1-202ENST00000420870 581 ntTSL 4 BASIC7.08□□□□□ -1.28
CCDC7Q96M83 AC092811.1-201ENST00000428642 397 ntTSL 3 BASIC7.08□□□□□ -1.28
CCDC7Q96M83 ITGA9-AS1-203ENST00000429532 702 ntTSL 5 BASIC7.08□□□□□ -1.28
CCDC7Q96M83 TEX41-205ENST00000431734 529 ntTSL 4 BASIC7.08□□□□□ -1.28
CCDC7Q96M83 AL161618.1-201ENST00000438738 761 ntTSL 5 BASIC7.08□□□□□ -1.28
CCDC7Q96M83 AC034228.3-201ENST00000446275 562 ntTSL 3 BASIC7.08□□□□□ -1.28
CCDC7Q96M83 KNOP1P3-201ENST00000446933 426 ntBASIC7.08□□□□□ -1.28
CCDC7Q96M83 AC090602.1-201ENST00000469695 252 ntBASIC7.08□□□□□ -1.28
CCDC7Q96M83 RPL7P16-201ENST00000479738 738 ntBASIC7.08□□□□□ -1.28
CCDC7Q96M83 AF181450.1-201ENST00000522980 410 ntTSL 3 BASIC7.08□□□□□ -1.28
CCDC7Q96M83 C14orf105-210ENST00000534126 1030 ntAPPRIS ALT1 TSL 1 (best) BASIC7.08□□□□□ -1.28
CCDC7Q96M83 BNIP3P1-201ENST00000547295 580 ntBASIC7.08□□□□□ -1.28
CCDC7Q96M83 AC022196.1-202ENST00000559570 462 ntTSL 3 BASIC7.08□□□□□ -1.28
CCDC7Q96M83 MIR4697-201ENST00000582977 78 ntBASIC7.08□□□□□ -1.28
CCDC7Q96M83 AC005757.1-201ENST00000591432 472 ntTSL 4 BASIC7.08□□□□□ -1.28
CCDC7Q96M83 AC008833.1-201ENST00000611633 691 ntBASIC7.08□□□□□ -1.28
CCDC7Q96M83 LINC01002-236ENST00000634022 378 ntTSL 5 BASIC7.08□□□□□ -1.28
CCDC7Q96M83 DNAH7-202ENST00000409063 1845 ntTSL 1 (best) BASIC7.07□□□□□ -1.28
CCDC7Q96M83 SLC1A3-216ENST00000613445 4030 ntTSL 5 BASIC7.07□□□□□ -1.28
CCDC7Q96M83 MED23-203ENST00000368058 4576 ntTSL 5 BASIC7.07□□□□□ -1.28
CCDC7Q96M83 AC139769.2-201ENST00000599944 2291 ntTSL 2 BASIC7.07□□□□□ -1.28
CCDC7Q96M83 KSR2-201ENST00000339824 17726 ntAPPRIS P1 TSL 5 BASIC7.07□□□□□ -1.28
CCDC7Q96M83 OFD1P9Y-201ENST00000417699 1491 ntBASIC7.07□□□□□ -1.28
CCDC7Q96M83 KLHL13-203ENST00000371878 3234 ntTSL 2 BASIC7.07□□□□□ -1.28
CCDC7Q96M83 R3HDM1-203ENST00000409606 3673 ntAPPRIS ALT1 TSL 2 BASIC7.07□□□□□ -1.28
CCDC7Q96M83 MIPEPP2-201ENST00000422560 1819 ntBASIC7.07□□□□□ -1.28
CCDC7Q96M83 AC004656.1-201ENST00000568479 4951 ntBASIC7.07□□□□□ -1.28
CCDC7Q96M83 MOCS2-203ENST00000450852 1337 ntTSL 1 (best) BASIC7.07□□□□□ -1.28
CCDC7Q96M83 NAP1L4P1-201ENST00000319092 1157 ntBASIC7.07□□□□□ -1.28
CCDC7Q96M83 RPS4XP9-201ENST00000405151 780 ntBASIC7.07□□□□□ -1.28
CCDC7Q96M83 AL450992.2-201ENST00000434182 506 ntTSL 5 BASIC7.07□□□□□ -1.28
CCDC7Q96M83 AC076966.1-201ENST00000435560 351 ntTSL 1 (best) BASIC7.07□□□□□ -1.28
CCDC7Q96M83 AL138878.2-201ENST00000440581 1241 ntBASIC7.07□□□□□ -1.28
CCDC7Q96M83 AC011753.3-201ENST00000443436 406 ntBASIC7.07□□□□□ -1.28
CCDC7Q96M83 AL161630.1-201ENST00000450938 1299 ntTSL 1 (best) BASIC7.07□□□□□ -1.28
CCDC7Q96M83 AC115989.1-202ENST00000452153 1150 ntTSL 2 BASIC7.07□□□□□ -1.28
CCDC7Q96M83 NPY6R-202ENST00000510937 2988 ntTSL 3 BASIC7.07□□□□□ -1.28
CCDC7Q96M83 AP002765.2-201ENST00000532961 666 ntTSL 3 BASIC7.07□□□□□ -1.28
CCDC7Q96M83 PYM1-205ENST00000547925 499 ntTSL 3 BASIC7.07□□□□□ -1.28
CCDC7Q96M83 AC066612.1-202ENST00000561094 518 ntTSL 5 BASIC7.07□□□□□ -1.28
CCDC7Q96M83 AC018552.1-201ENST00000562099 811 ntBASIC7.07□□□□□ -1.28
CCDC7Q96M83 AL031600.2-201ENST00000563223 307 ntTSL 5 BASIC7.07□□□□□ -1.28
CCDC7Q96M83 PDE4D-216ENST00000507116 3350 ntAPPRIS P1 TSL 1 (best) BASIC7.07□□□□□ -1.28
CCDC7Q96M83 SLCO1A2-212ENST00000458504 2008 ntTSL 2 BASIC7.06□□□□□ -1.28
CCDC7Q96M83 AC104793.1-201ENST00000508189 2840 ntTSL 2 BASIC7.06□□□□□ -1.28
CCDC7Q96M83 EXO1-201ENST00000348581 3192 ntAPPRIS P3 TSL 1 (best) BASIC7.06□□□□□ -1.28
CCDC7Q96M83 AL033384.1-202ENST00000431554 3104 ntTSL 1 (best) BASIC7.06□□□□□ -1.28
CCDC7Q96M83 KMT5B-215ENST00000615954 4306 ntAPPRIS P1 TSL 1 (best) BASIC7.06□□□□□ -1.28
CCDC7Q96M83 ZNF891-201ENST00000537226 15455 ntAPPRIS P1 TSL 2 BASIC7.06□□□□□ -1.28
CCDC7Q96M83 PHACTR2P1-201ENST00000605639 1414 ntBASIC7.06□□□□□ -1.28
CCDC7Q96M83 MUC17-201ENST00000306151 14247 ntAPPRIS P1 TSL 1 (best) BASIC7.06□□□□□ -1.28
CCDC7Q96M83 CHEK1-216ENST00000534070 3513 ntAPPRIS P1 TSL 1 (best) BASIC7.06□□□□□ -1.28
CCDC7Q96M83 C2orf73-203ENST00000405749 576 ntTSL 4 BASIC7.06□□□□□ -1.28
CCDC7Q96M83 LINC02528-201ENST00000417800 381 ntTSL 2 BASIC7.06□□□□□ -1.28
CCDC7Q96M83 AL139819.1-201ENST00000429420 471 ntTSL 3 BASIC7.06□□□□□ -1.28
CCDC7Q96M83 AL353689.2-201ENST00000433837 440 ntTSL 3 BASIC7.06□□□□□ -1.28
CCDC7Q96M83 TM4SF1-AS1-202ENST00000496491 754 ntTSL 2 BASIC7.06□□□□□ -1.28
CCDC7Q96M83 AC020612.3-201ENST00000550644 570 ntTSL 2 BASIC7.06□□□□□ -1.28
Retrieved 100 of 98,524 protein–RNA pairs in 92.1 ms