Protein–RNA interactions for Protein: Q96AA3

RFT1, Protein RFT1 homolog, humanhuman

Predictions only

Length 541 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFT1Q96AA3 AC008555.3-201ENST00000603717 442 ntTSL 3 BASIC4.83□□□□□ -1.64
RFT1Q96AA3 MILR1-204ENST00000616498 747 ntAPPRIS ALT2 TSL 1 (best) BASIC4.83□□□□□ -1.64
RFT1Q96AA3 OSER1-AS1-205ENST00000623343 827 ntTSL 5 BASIC4.83□□□□□ -1.64
RFT1Q96AA3 AC021106.3-201ENST00000623925 531 ntBASIC4.83□□□□□ -1.64
RFT1Q96AA3 OR52B4-201ENST00000624801 1124 ntAPPRIS P1 BASIC4.83□□□□□ -1.64
RFT1Q96AA3 AP001052.1-201ENST00000626421 99 ntBASIC4.83□□□□□ -1.64
RFT1Q96AA3 ZNF253-205ENST00000640599 1208 ntTSL 1 (best) BASIC4.83□□□□□ -1.64
RFT1Q96AA3 LINC01355-201ENST00000566551 5444 ntBASIC4.83□□□□□ -1.64
RFT1Q96AA3 ERP27-201ENST00000266397 2096 ntAPPRIS P1 TSL 1 (best) BASIC4.83□□□□□ -1.64
RFT1Q96AA3 RLIM-201ENST00000332687 8317 ntAPPRIS P1 TSL 1 (best) BASIC4.83□□□□□ -1.64
RFT1Q96AA3 NEGR1-201ENST00000306821 5577 ntTSL 1 (best) BASIC4.83□□□□□ -1.64
RFT1Q96AA3 LINC00919-201ENST00000561513 1658 ntTSL 2 BASIC4.83□□□□□ -1.64
RFT1Q96AA3 OFD1P6Y-201ENST00000432335 1637 ntTSL 2 BASIC4.83□□□□□ -1.64
RFT1Q96AA3 TTTY9B-201ENST00000433794 1637 ntTSL 2 BASIC4.83□□□□□ -1.64
RFT1Q96AA3 ZNF418-205ENST00000595830 3543 ntAPPRIS P3 TSL 1 (best) BASIC4.83□□□□□ -1.64
RFT1Q96AA3 OR6C75-202ENST00000641576 4569 ntAPPRIS P1 BASIC4.82□□□□□ -1.64
RFT1Q96AA3 POU2F1-212ENST00000541643 13937 ntAPPRIS ALT2 TSL 1 (best) BASIC4.82□□□□□ -1.64
RFT1Q96AA3 MARCH1-202ENST00000339875 2476 ntTSL 1 (best) BASIC4.82□□□□□ -1.64
RFT1Q96AA3 ADGRL2-209ENST00000370727 5164 ntTSL 5 BASIC4.82□□□□□ -1.64
RFT1Q96AA3 ATF7IP-209ENST00000536444 8774 ntAPPRIS ALT2 TSL 1 (best) BASIC4.82□□□□□ -1.64
RFT1Q96AA3 HSPA13-201ENST00000285667 3986 ntAPPRIS P1 TSL 1 (best) BASIC4.82□□□□□ -1.64
RFT1Q96AA3 EEF1A1P21-201ENST00000512363 1344 ntBASIC4.82□□□□□ -1.64
RFT1Q96AA3 RLN1-201ENST00000223862 967 ntAPPRIS P1 TSL 1 (best) BASIC4.82□□□□□ -1.64
RFT1Q96AA3 OR56A3-201ENST00000329564 948 ntAPPRIS P1 BASIC4.82□□□□□ -1.64
RFT1Q96AA3 RNA5SP477-201ENST00000362639 119 ntBASIC4.82□□□□□ -1.64
RFT1Q96AA3 RNU1-65P-201ENST00000363919 148 ntBASIC4.82□□□□□ -1.64
RFT1Q96AA3 KRTAP3-1-201ENST00000391588 594 ntAPPRIS P1 BASIC4.82□□□□□ -1.64
RFT1Q96AA3 ARL4A-205ENST00000404894 840 ntAPPRIS P1 TSL 2 BASIC4.82□□□□□ -1.64
RFT1Q96AA3 RPL26P37-201ENST00000411983 438 ntBASIC4.82□□□□□ -1.64
RFT1Q96AA3 AL645465.1-201ENST00000417765 642 ntTSL 3 BASIC4.82□□□□□ -1.64
RFT1Q96AA3 ODF2-AS1-201ENST00000420801 407 ntTSL 3 BASIC4.82□□□□□ -1.64
RFT1Q96AA3 AC008164.1-201ENST00000423925 564 ntTSL 4 BASIC4.82□□□□□ -1.64
RFT1Q96AA3 ITGA9-AS1-203ENST00000429532 702 ntTSL 5 BASIC4.82□□□□□ -1.64
RFT1Q96AA3 RPS26P4-201ENST00000431743 355 ntBASIC4.82□□□□□ -1.64
RFT1Q96AA3 AC023128.1-201ENST00000432431 799 ntTSL 3 BASIC4.82□□□□□ -1.64
RFT1Q96AA3 AC007679.3-201ENST00000434035 414 ntBASIC4.82□□□□□ -1.64
RFT1Q96AA3 VN1R110P-201ENST00000438988 971 ntBASIC4.82□□□□□ -1.64
RFT1Q96AA3 AC019117.1-202ENST00000439046 589 ntTSL 3 BASIC4.82□□□□□ -1.64
RFT1Q96AA3 AL137186.1-201ENST00000440436 480 ntTSL 3 BASIC4.82□□□□□ -1.64
RFT1Q96AA3 AL049552.1-201ENST00000444302 577 ntTSL 2 BASIC4.82□□□□□ -1.64
RFT1Q96AA3 AL021937.3-201ENST00000446543 361 ntTSL 2 BASIC4.82□□□□□ -1.64
RFT1Q96AA3 NREP-207ENST00000450761 636 ntAPPRIS P1 TSL 4 BASIC4.82□□□□□ -1.64
RFT1Q96AA3 AC118758.1-202ENST00000454719 225 ntBASIC4.82□□□□□ -1.64
RFT1Q96AA3 TPT1P1-201ENST00000458495 518 ntBASIC4.82□□□□□ -1.64
RFT1Q96AA3 ZIC4-AS1-201ENST00000462168 268 ntTSL 5 BASIC4.82□□□□□ -1.64
RFT1Q96AA3 GTPBP8-204ENST00000467752 686 ntTSL 5 BASIC4.82□□□□□ -1.64
RFT1Q96AA3 AC073610.1-201ENST00000489971 396 ntBASIC4.82□□□□□ -1.64
RFT1Q96AA3 RN7SL346P-201ENST00000491561 294 ntBASIC4.82□□□□□ -1.64
RFT1Q96AA3 HMGB1P3-201ENST00000502802 616 ntBASIC4.82□□□□□ -1.64
RFT1Q96AA3 LINC02271-202ENST00000506379 596 ntTSL 4 BASIC4.82□□□□□ -1.64
RFT1Q96AA3 DUTP7-201ENST00000507982 486 ntBASIC4.82□□□□□ -1.64
RFT1Q96AA3 AC021106.1-201ENST00000509020 1058 ntBASIC4.82□□□□□ -1.64
RFT1Q96AA3 AC122710.1-201ENST00000510622 553 ntTSL 5 BASIC4.82□□□□□ -1.64
RFT1Q96AA3 MTHFD2P4-201ENST00000515074 1025 ntBASIC4.82□□□□□ -1.64
RFT1Q96AA3 RN7SKP183-201ENST00000517169 324 ntBASIC4.82□□□□□ -1.64
RFT1Q96AA3 AP006245.2-201ENST00000522004 300 ntBASIC4.82□□□□□ -1.64
RFT1Q96AA3 AC027369.2-201ENST00000528030 440 ntBASIC4.82□□□□□ -1.64
RFT1Q96AA3 AP002444.1-201ENST00000534252 620 ntTSL 3 BASIC4.82□□□□□ -1.64
RFT1Q96AA3 OR8X1P-201ENST00000534542 869 ntBASIC4.82□□□□□ -1.64
RFT1Q96AA3 AL590385.2-201ENST00000537821 553 ntTSL 5 BASIC4.82□□□□□ -1.64
RFT1Q96AA3 OR52E8-201ENST00000537935 1061 ntAPPRIS P1 BASIC4.82□□□□□ -1.64
RFT1Q96AA3 AL133481.2-201ENST00000538322 367 ntTSL 2 BASIC4.82□□□□□ -1.64
RFT1Q96AA3 HSPE1P2-201ENST00000554777 306 ntBASIC4.82□□□□□ -1.64
RFT1Q96AA3 AL139021.2-201ENST00000556390 399 ntTSL 3 BASIC4.82□□□□□ -1.64
RFT1Q96AA3 AL161757.4-204ENST00000557136 834 ntTSL 3 BASIC4.82□□□□□ -1.64
RFT1Q96AA3 AC074050.3-201ENST00000569175 441 ntTSL 4 BASIC4.82□□□□□ -1.64
RFT1Q96AA3 CASC22-201ENST00000569713 386 ntTSL 5 BASIC4.82□□□□□ -1.64
RFT1Q96AA3 AC084373.1-201ENST00000603311 235 ntBASIC4.82□□□□□ -1.64
RFT1Q96AA3 AL137072.1-201ENST00000603444 466 ntBASIC4.82□□□□□ -1.64
RFT1Q96AA3 AC108738.1-201ENST00000603703 237 ntBASIC4.82□□□□□ -1.64
RFT1Q96AA3 IGLCOR22-2-201ENST00000605398 313 ntBASIC4.82□□□□□ -1.64
RFT1Q96AA3 AC105402.3-203ENST00000608822 885 ntTSL 5 BASIC4.82□□□□□ -1.64
RFT1Q96AA3 AL121904.1-201ENST00000611894 948 ntTSL 5 BASIC4.82□□□□□ -1.64
RFT1Q96AA3 AC073592.6-201ENST00000624271 415 ntBASIC4.82□□□□□ -1.64
RFT1Q96AA3 AC022919.1-201ENST00000624979 626 ntBASIC4.82□□□□□ -1.64
RFT1Q96AA3 AL357060.1-201ENST00000638039 977 ntTSL 5 BASIC4.82□□□□□ -1.64
RFT1Q96AA3 SLC24A2-202ENST00000341998 10749 ntAPPRIS P1 TSL 1 (best) BASIC4.82□□□□□ -1.64
RFT1Q96AA3 AC000374.1-201ENST00000434698 1745 ntBASIC4.82□□□□□ -1.64
RFT1Q96AA3 AC092821.1-201ENST00000640129 4180 ntAPPRIS P1 TSL 5 BASIC4.82□□□□□ -1.64
RFT1Q96AA3 ZNF681-201ENST00000402377 6497 ntAPPRIS P1 TSL 1 (best) BASIC4.82□□□□□ -1.64
RFT1Q96AA3 RALYL-211ENST00000523850 1684 ntTSL 2 BASIC4.82□□□□□ -1.64
RFT1Q96AA3 MAPK10-235ENST00000638225 8941 ntAPPRIS P2 TSL 1 (best) BASIC4.82□□□□□ -1.64
RFT1Q96AA3 BMPR1APS1-201ENST00000403332 1598 ntBASIC4.82□□□□□ -1.64
RFT1Q96AA3 ZNF92-203ENST00000431504 2947 ntTSL 1 (best) BASIC4.82□□□□□ -1.64
RFT1Q96AA3 ANKRD30A-202ENST00000374660 4762 ntAPPRIS ALT2 TSL 5 BASIC4.81□□□□□ -1.64
RFT1Q96AA3 JCHAIN-201ENST00000254801 1438 ntAPPRIS P1 TSL 1 (best) BASIC4.81□□□□□ -1.64
RFT1Q96AA3 CD164-207ENST00000504373 1402 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
RFT1Q96AA3 AC100757.1-201ENST00000616872 1835 ntBASIC4.81□□□□□ -1.64
RFT1Q96AA3 OR5A1-202ENST00000641045 8612 ntAPPRIS P1 BASIC4.81□□□□□ -1.64
RFT1Q96AA3 AC083843.3-201ENST00000623679 2186 ntBASIC4.81□□□□□ -1.64
RFT1Q96AA3 OR14A16-202ENST00000641093 1367 ntAPPRIS P1 BASIC4.81□□□□□ -1.64
RFT1Q96AA3 ARID2-205ENST00000444670 7316 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
RFT1Q96AA3 AC000123.3-201ENST00000624029 4975 ntBASIC4.81□□□□□ -1.64
RFT1Q96AA3 ARHGAP24-201ENST00000264343 4572 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
RFT1Q96AA3 MAP3K7-203ENST00000369327 4558 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
RFT1Q96AA3 ODF3-202ENST00000342593 386 ntTSL 5 BASIC4.81□□□□□ -1.64
RFT1Q96AA3 ADPRM-201ENST00000379774 1209 ntAPPRIS P1 TSL 1 (best) BASIC4.81□□□□□ -1.64
RFT1Q96AA3 RPL12P9-201ENST00000412942 488 ntBASIC4.81□□□□□ -1.64
RFT1Q96AA3 RANP4-201ENST00000413361 655 ntBASIC4.81□□□□□ -1.64
RFT1Q96AA3 HAO2-IT1-201ENST00000419144 311 ntTSL 5 BASIC4.81□□□□□ -1.64
Retrieved 100 of 98,524 protein–RNA pairs in 67 ms