Protein–RNA interactions for Protein: Q8NF91

SYNE1, Nesprin-1, humanhuman

Known RBP Predictions only

Length 8,797 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE1Q8NF91 AC013733.1-201ENST00000449835 985 ntTSL 4 BASIC1.58□□□□□ -2.16
SYNE1Q8NF91 AC068633.1-202ENST00000476460 458 ntTSL 2 BASIC1.58□□□□□ -2.16
SYNE1Q8NF91 AC021106.1-201ENST00000509020 1058 ntBASIC1.58□□□□□ -2.16
SYNE1Q8NF91 AC011389.1-201ENST00000509170 594 ntTSL 4 BASIC1.58□□□□□ -2.16
SYNE1Q8NF91 AP002765.2-201ENST00000532961 666 ntTSL 3 BASIC1.58□□□□□ -2.16
SYNE1Q8NF91 AC137627.1-201ENST00000545761 289 ntBASIC1.58□□□□□ -2.16
SYNE1Q8NF91 AC009117.1-201ENST00000563948 554 ntBASIC1.58□□□□□ -2.16
SYNE1Q8NF91 FIGN-201ENST00000333129 9536 ntAPPRIS P1 TSL 1 (best) BASIC1.58□□□□□ -2.16
SYNE1Q8NF91 PAK3-213ENST00000620137 2130 ntTSL 5 BASIC1.58□□□□□ -2.16
SYNE1Q8NF91 ZNF780A-203ENST00000450241 7500 ntTSL 2 BASIC1.58□□□□□ -2.16
SYNE1Q8NF91 XPO4-201ENST00000255305 9921 ntAPPRIS P2 TSL 1 (best) BASIC1.58□□□□□ -2.16
SYNE1Q8NF91 GSTM2-206ENST00000442650 1478 ntTSL 5 BASIC1.58□□□□□ -2.16
SYNE1Q8NF91 OR10G4-203ENST00000641722 3301 ntAPPRIS P1 BASIC1.58□□□□□ -2.16
SYNE1Q8NF91 SNORA48.7-201ENST00000391302 135 ntBASIC1.58□□□□□ -2.16
SYNE1Q8NF91 RPL17P50-201ENST00000396131 546 ntBASIC1.58□□□□□ -2.16
SYNE1Q8NF91 NRBF2P2-201ENST00000413087 861 ntBASIC1.58□□□□□ -2.16
SYNE1Q8NF91 AC112498.1-201ENST00000444401 332 ntBASIC1.58□□□□□ -2.16
SYNE1Q8NF91 snoU13.22-201ENST00000459428 104 ntBASIC1.58□□□□□ -2.16
SYNE1Q8NF91 AP003028.1-203ENST00000525832 444 ntTSL 3 BASIC1.58□□□□□ -2.16
SYNE1Q8NF91 GAPLINC-202ENST00000579007 643 ntTSL 3 BASIC1.58□□□□□ -2.16
SYNE1Q8NF91 Metazoa_SRP.181-201ENST00000616636 288 ntBASIC1.58□□□□□ -2.16
SYNE1Q8NF91 AL158835.1-203ENST00000415305 3149 ntTSL 1 (best) BASIC1.58□□□□□ -2.16
SYNE1Q8NF91 IMPG2-201ENST00000193391 8337 ntAPPRIS P1 TSL 1 (best) BASIC1.58□□□□□ -2.16
SYNE1Q8NF91 ZEB2-244ENST00000638007 9140 ntTSL 5 BASIC1.58□□□□□ -2.16
SYNE1Q8NF91 ADAM18-201ENST00000265707 2388 ntAPPRIS P3 TSL 1 (best) BASIC1.58□□□□□ -2.16
SYNE1Q8NF91 GABRG2-202ENST00000361925 3767 ntTSL 3 BASIC1.58□□□□□ -2.16
SYNE1Q8NF91 CUL4B-204ENST00000404115 3264 ntTSL 1 (best) BASIC1.58□□□□□ -2.16
SYNE1Q8NF91 MMRN1-201ENST00000264790 4967 ntAPPRIS P1 TSL 1 (best) BASIC1.58□□□□□ -2.16
SYNE1Q8NF91 MMP8-201ENST00000236826 3056 ntAPPRIS P1 TSL 1 (best) BASIC1.58□□□□□ -2.16
SYNE1Q8NF91 AC105411.1-201ENST00000568776 1470 ntTSL 4 BASIC1.58□□□□□ -2.16
SYNE1Q8NF91 RNU1-74P-201ENST00000384108 171 ntBASIC1.58□□□□□ -2.16
SYNE1Q8NF91 MTERF4-204ENST00000406593 802 ntTSL 2 BASIC1.58□□□□□ -2.16
SYNE1Q8NF91 AC096921.1-201ENST00000411661 375 ntBASIC1.58□□□□□ -2.16
SYNE1Q8NF91 SMIM2-IT1-201ENST00000415082 478 ntTSL 3 BASIC1.58□□□□□ -2.16
SYNE1Q8NF91 AL645608.4-201ENST00000423619 154 ntBASIC1.58□□□□□ -2.16
SYNE1Q8NF91 AL157378.1-201ENST00000424506 265 ntTSL 5 BASIC1.58□□□□□ -2.16
SYNE1Q8NF91 TRGV7-201ENST00000427089 353 ntBASIC1.58□□□□□ -2.16
SYNE1Q8NF91 RPL12P28-201ENST00000430852 489 ntBASIC1.58□□□□□ -2.16
SYNE1Q8NF91 RBMX-203ENST00000431446 2004 ntTSL 2 BASIC1.58□□□□□ -2.16
SYNE1Q8NF91 CYCSP6-201ENST00000434498 302 ntBASIC1.58□□□□□ -2.16
SYNE1Q8NF91 AC074327.1-202ENST00000443523 369 ntTSL 2 BASIC1.58□□□□□ -2.16
SYNE1Q8NF91 Z99127.1-202ENST00000448686 526 ntTSL 2 BASIC1.58□□□□□ -2.16
SYNE1Q8NF91 AC073264.2-201ENST00000448886 166 ntBASIC1.58□□□□□ -2.16
SYNE1Q8NF91 AC105021.1-201ENST00000455347 590 ntTSL 3 BASIC1.58□□□□□ -2.16
SYNE1Q8NF91 RN7SL385P-201ENST00000468873 276 ntBASIC1.58□□□□□ -2.16
SYNE1Q8NF91 AC006463.2-201ENST00000473326 348 ntBASIC1.58□□□□□ -2.16
SYNE1Q8NF91 AP000797.2-201ENST00000475768 606 ntBASIC1.58□□□□□ -2.16
SYNE1Q8NF91 RN7SL205P-201ENST00000490174 284 ntBASIC1.58□□□□□ -2.16
SYNE1Q8NF91 RN7SKP99-201ENST00000517028 307 ntBASIC1.58□□□□□ -2.16
SYNE1Q8NF91 DERA-209ENST00000532964 854 ntTSL 5 BASIC1.58□□□□□ -2.16
SYNE1Q8NF91 AC006511.5-202ENST00000546339 1198 ntTSL 5 BASIC1.58□□□□□ -2.16
SYNE1Q8NF91 RN7SL52P-201ENST00000584271 284 ntBASIC1.58□□□□□ -2.16
SYNE1Q8NF91 AC100775.1-201ENST00000590942 522 ntTSL 3 BASIC1.58□□□□□ -2.16
SYNE1Q8NF91 AL161616.1-201ENST00000611867 286 ntBASIC1.58□□□□□ -2.16
SYNE1Q8NF91 RN7SL722P-201ENST00000617780 284 ntBASIC1.58□□□□□ -2.16
SYNE1Q8NF91 RN7SL565P-201ENST00000618246 284 ntBASIC1.58□□□□□ -2.16
SYNE1Q8NF91 PCDH15-201ENST00000320301 6845 ntTSL 1 (best) BASIC1.58□□□□□ -2.16
SYNE1Q8NF91 UNC5C-205ENST00000610318 9403 ntTSL 5 BASIC1.58□□□□□ -2.16
SYNE1Q8NF91 GYS2-201ENST00000261195 3132 ntAPPRIS P1 TSL 1 (best) BASIC1.58□□□□□ -2.16
SYNE1Q8NF91 SPRR2D-201ENST00000360379 682 ntAPPRIS P1 TSL 1 (best) BASIC1.58□□□□□ -2.16
SYNE1Q8NF91 RNU1-32P-201ENST00000363937 159 ntBASIC1.58□□□□□ -2.16
SYNE1Q8NF91 CYP2AC1P-201ENST00000407830 1173 ntBASIC1.58□□□□□ -2.16
SYNE1Q8NF91 TSSK4-203ENST00000428351 576 ntTSL 2 BASIC1.58□□□□□ -2.16
SYNE1Q8NF91 INTS6-AS1-201ENST00000434512 466 ntTSL 3 BASIC1.58□□□□□ -2.16
SYNE1Q8NF91 TRY2P-201ENST00000448860 689 ntBASIC1.58□□□□□ -2.16
SYNE1Q8NF91 AL356289.2-201ENST00000455238 292 ntTSL 5 BASIC1.58□□□□□ -2.16
SYNE1Q8NF91 AC063943.1-201ENST00000465434 453 ntBASIC1.58□□□□□ -2.16
SYNE1Q8NF91 AC097173.2-201ENST00000518701 474 ntTSL 3 BASIC1.58□□□□□ -2.16
SYNE1Q8NF91 AL163952.1-202ENST00000569625 600 ntBASIC1.58□□□□□ -2.16
SYNE1Q8NF91 AC010401.3-201ENST00000576600 582 ntTSL 4 BASIC1.58□□□□□ -2.16
SYNE1Q8NF91 MIR3160-1-201ENST00000577972 85 ntBASIC1.58□□□□□ -2.16
SYNE1Q8NF91 AC243585.1-201ENST00000617867 607 ntTSL 3 BASIC1.58□□□□□ -2.16
SYNE1Q8NF91 PCBP1-AS1-286ENST00000625888 765 ntTSL 5 BASIC1.58□□□□□ -2.16
SYNE1Q8NF91 MFSD8-236ENST00000641509 4050 ntBASIC1.58□□□□□ -2.16
SYNE1Q8NF91 SASS6-201ENST00000287482 3880 ntAPPRIS P1 TSL 1 (best) BASIC1.58□□□□□ -2.16
SYNE1Q8NF91 SEC31A-203ENST00000348405 4012 ntAPPRIS ALT2 TSL 1 (best) BASIC1.58□□□□□ -2.16
SYNE1Q8NF91 PSD3-204ENST00000440756 11690 ntAPPRIS ALT2 TSL 5 BASIC1.58□□□□□ -2.16
SYNE1Q8NF91 AL031123.3-201ENST00000623345 1837 ntBASIC1.58□□□□□ -2.16
SYNE1Q8NF91 CD84-208ENST00000534968 7885 ntTSL 1 (best) BASIC1.58□□□□□ -2.16
SYNE1Q8NF91 AC087257.1-201ENST00000506925 2639 ntTSL 4 BASIC1.58□□□□□ -2.16
SYNE1Q8NF91 AC066595.1-201ENST00000426697 399 ntTSL 3 BASIC1.58□□□□□ -2.16
SYNE1Q8NF91 FLJ27354-202ENST00000443562 770 ntTSL 3 BASIC1.58□□□□□ -2.16
SYNE1Q8NF91 AC079896.1-201ENST00000455845 488 ntTSL 3 BASIC1.58□□□□□ -2.16
SYNE1Q8NF91 AC010230.1-202ENST00000506265 592 ntTSL 5 BASIC1.58□□□□□ -2.16
SYNE1Q8NF91 SNORA70.11-201ENST00000515987 138 ntBASIC1.58□□□□□ -2.16
SYNE1Q8NF91 SNORA70.13-201ENST00000516116 138 ntBASIC1.58□□□□□ -2.16
SYNE1Q8NF91 MIR4500HG-205ENST00000606590 579 ntTSL 4 BASIC1.58□□□□□ -2.16
SYNE1Q8NF91 OR2M2-202ENST00000641211 1229 ntAPPRIS P1 BASIC1.58□□□□□ -2.16
SYNE1Q8NF91 OR2M2-203ENST00000641836 1151 ntAPPRIS P1 BASIC1.58□□□□□ -2.16
SYNE1Q8NF91 CHMP1B2P-202ENST00000614414 6813 ntTSL 1 (best) BASIC1.58□□□□□ -2.16
SYNE1Q8NF91 AC112255.1-201ENST00000624070 2493 ntBASIC1.58□□□□□ -2.16
SYNE1Q8NF91 TLK2-214ENST00000582809 3608 ntTSL 1 (best) BASIC1.58□□□□□ -2.16
SYNE1Q8NF91 LINC01541-202ENST00000568095 3105 ntTSL 1 (best) BASIC1.58□□□□□ -2.16
SYNE1Q8NF91 ZNF24-204ENST00000589881 7419 ntTSL 1 (best) BASIC1.58□□□□□ -2.16
SYNE1Q8NF91 AC007938.2-201ENST00000604666 2634 ntBASIC1.58□□□□□ -2.16
SYNE1Q8NF91 RNU1-85P-201ENST00000364127 164 ntBASIC1.58□□□□□ -2.16
SYNE1Q8NF91 TRAV26-2-201ENST00000390460 327 ntAPPRIS P1 BASIC1.58□□□□□ -2.16
SYNE1Q8NF91 AL133482.1-201ENST00000415988 498 ntBASIC1.58□□□□□ -2.16
SYNE1Q8NF91 LINC01291-202ENST00000418204 441 ntTSL 5 BASIC1.58□□□□□ -2.16
SYNE1Q8NF91 VN1R21P-201ENST00000426703 765 ntBASIC1.58□□□□□ -2.16
Retrieved 100 of 98,524 protein–RNA pairs in 100.2 ms