Protein–RNA interactions for Protein: Q8NDH2

CCDC168, Coiled-coil domain-containing protein 168, humanhuman

Predictions only

Length 2,452 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC168Q8NDH2 ERVK-28-203ENST00000600419 457 ntTSL 1 (best) BASIC4.29□□□□□ -1.72
CCDC168Q8NDH2 AC090948.1-201ENST00000607464 549 ntBASIC4.29□□□□□ -1.72
CCDC168Q8NDH2 HTR4-206ENST00000520086 2272 ntTSL 2 BASIC4.29□□□□□ -1.72
CCDC168Q8NDH2 MYBPC1-204ENST00000452455 3861 ntAPPRIS ALT2 TSL 2 BASIC4.29□□□□□ -1.72
CCDC168Q8NDH2 MME-203ENST00000460393 5622 ntAPPRIS P1 TSL 1 (best) BASIC4.29□□□□□ -1.72
CCDC168Q8NDH2 DDX58-202ENST00000379883 4353 ntAPPRIS P1 TSL 1 (best) BASIC4.29□□□□□ -1.72
CCDC168Q8NDH2 CD2-202ENST00000369478 1609 ntAPPRIS P1 TSL 1 (best) BASIC4.29□□□□□ -1.72
CCDC168Q8NDH2 ANKRD26P1-204ENST00000571006 4741 ntTSL 1 (best) BASIC4.29□□□□□ -1.72
CCDC168Q8NDH2 IL5-201ENST00000231454 816 ntAPPRIS P1 TSL 1 (best) BASIC4.29□□□□□ -1.72
CCDC168Q8NDH2 AL121657.1-201ENST00000327215 531 ntBASIC4.29□□□□□ -1.72
CCDC168Q8NDH2 RNA5SP28-201ENST00000363841 119 ntBASIC4.29□□□□□ -1.72
CCDC168Q8NDH2 U3.10-201ENST00000364459 214 ntBASIC4.29□□□□□ -1.72
CCDC168Q8NDH2 CASKP1-201ENST00000412870 582 ntBASIC4.29□□□□□ -1.72
CCDC168Q8NDH2 LINC00894-201ENST00000413076 403 ntTSL 3 BASIC4.29□□□□□ -1.72
CCDC168Q8NDH2 AC007568.1-201ENST00000422912 471 ntBASIC4.29□□□□□ -1.72
CCDC168Q8NDH2 SPATA13-AS1-201ENST00000430733 433 ntTSL 3 BASIC4.29□□□□□ -1.72
CCDC168Q8NDH2 AC016831.4-201ENST00000438302 307 ntBASIC4.29□□□□□ -1.72
CCDC168Q8NDH2 AC060834.2-201ENST00000447999 618 ntTSL 3 BASIC4.29□□□□□ -1.72
CCDC168Q8NDH2 AC106806.2-201ENST00000509365 500 ntBASIC4.29□□□□□ -1.72
CCDC168Q8NDH2 RN7SKP83-201ENST00000516512 178 ntBASIC4.29□□□□□ -1.72
CCDC168Q8NDH2 AC002428.2-201ENST00000522973 414 ntTSL 3 BASIC4.29□□□□□ -1.72
CCDC168Q8NDH2 AC091163.1-201ENST00000524012 605 ntTSL 4 BASIC4.29□□□□□ -1.72
CCDC168Q8NDH2 AC244502.2-201ENST00000543361 851 ntBASIC4.29□□□□□ -1.72
CCDC168Q8NDH2 AC137627.1-201ENST00000545761 289 ntBASIC4.29□□□□□ -1.72
CCDC168Q8NDH2 ARL6IP1P1-201ENST00000545836 610 ntBASIC4.29□□□□□ -1.72
CCDC168Q8NDH2 AC007342.4-202ENST00000565189 721 ntTSL 3 BASIC4.29□□□□□ -1.72
CCDC168Q8NDH2 AP005119.2-201ENST00000579735 1105 ntBASIC4.29□□□□□ -1.72
CCDC168Q8NDH2 Metazoa_SRP.111-201ENST00000614073 259 ntBASIC4.29□□□□□ -1.72
CCDC168Q8NDH2 PDCD6IPP1-202ENST00000622242 1064 ntBASIC4.29□□□□□ -1.72
CCDC168Q8NDH2 SLC12A1-201ENST00000330289 1764 ntTSL 1 (best) BASIC4.29□□□□□ -1.72
CCDC168Q8NDH2 ZBBX-202ENST00000392764 2849 ntAPPRIS ALT2 TSL 1 (best) BASIC4.29□□□□□ -1.72
CCDC168Q8NDH2 FGF1-214ENST00000612258 3805 ntAPPRIS P1 TSL 1 (best) BASIC4.28□□□□□ -1.72
CCDC168Q8NDH2 UACA-211ENST00000560441 4723 ntAPPRIS ALT2 TSL 5 BASIC4.28□□□□□ -1.72
CCDC168Q8NDH2 CTTNBP2NL-201ENST00000271277 5897 ntAPPRIS P1 TSL 1 (best) BASIC4.28□□□□□ -1.72
CCDC168Q8NDH2 MUM1L1-202ENST00000357175 4173 ntAPPRIS P1 TSL 2 BASIC4.28□□□□□ -1.72
CCDC168Q8NDH2 RNMT-202ENST00000383314 6250 ntAPPRIS P1 TSL 1 (best) BASIC4.28□□□□□ -1.72
CCDC168Q8NDH2 AC017104.4-201ENST00000636283 1592 ntBASIC4.28□□□□□ -1.72
CCDC168Q8NDH2 AC010928.1-201ENST00000592477 1447 ntBASIC4.28□□□□□ -1.72
CCDC168Q8NDH2 FOXP1-IT1-201ENST00000498714 3539 ntTSL 2 BASIC4.28□□□□□ -1.72
CCDC168Q8NDH2 MROH2B-203ENST00000506092 3745 ntTSL 2 BASIC4.28□□□□□ -1.72
CCDC168Q8NDH2 AC104162.1-201ENST00000430831 2382 ntBASIC4.28□□□□□ -1.72
CCDC168Q8NDH2 OR1L8-201ENST00000304865 1061 ntAPPRIS P1 BASIC4.28□□□□□ -1.72
CCDC168Q8NDH2 Y_RNA.333-201ENST00000365274 102 ntBASIC4.28□□□□□ -1.72
CCDC168Q8NDH2 MIR298-201ENST00000401212 88 ntBASIC4.28□□□□□ -1.72
CCDC168Q8NDH2 C9orf57-202ENST00000424431 1297 ntAPPRIS ALT2 TSL 1 (best) BASIC4.28□□□□□ -1.72
CCDC168Q8NDH2 AC007327.2-201ENST00000440788 457 ntTSL 3 BASIC4.28□□□□□ -1.72
CCDC168Q8NDH2 AP000402.1-201ENST00000446404 540 ntTSL 3 BASIC4.28□□□□□ -1.72
CCDC168Q8NDH2 AC068492.1-201ENST00000448672 469 ntTSL 3 BASIC4.28□□□□□ -1.72
CCDC168Q8NDH2 RPL23AP24-201ENST00000458203 385 ntBASIC4.28□□□□□ -1.72
CCDC168Q8NDH2 AC008957.1-201ENST00000510740 478 ntTSL 3 BASIC4.28□□□□□ -1.72
CCDC168Q8NDH2 MTCO1P35-201ENST00000515270 228 ntBASIC4.28□□□□□ -1.72
CCDC168Q8NDH2 ASPH-226ENST00000522919 1277 ntTSL 3 BASIC4.28□□□□□ -1.72
CCDC168Q8NDH2 UBL5-207ENST00000590068 390 ntAPPRIS P1 TSL 5 BASIC4.28□□□□□ -1.72
CCDC168Q8NDH2 AC104447.1-201ENST00000624214 2124 ntBASIC4.28□□□□□ -1.72
CCDC168Q8NDH2 ZBTB38-220ENST00000514251 7683 ntAPPRIS P1 TSL 2 BASIC4.28□□□□□ -1.72
CCDC168Q8NDH2 TCF4-284ENST00000637169 7553 ntTSL 5 BASIC4.28□□□□□ -1.72
CCDC168Q8NDH2 AC120338.1-201ENST00000625074 1541 ntBASIC4.28□□□□□ -1.72
CCDC168Q8NDH2 MLH3-202ENST00000380968 7819 ntTSL 1 (best) BASIC4.28□□□□□ -1.72
CCDC168Q8NDH2 MIA3-203ENST00000344922 8142 ntAPPRIS P2 TSL 5 BASIC4.28□□□□□ -1.72
CCDC168Q8NDH2 DCDC1-207ENST00000452803 1706 ntTSL 1 (best) BASIC4.28□□□□□ -1.72
CCDC168Q8NDH2 SNORD113.2-201ENST00000364166 89 ntBASIC4.28□□□□□ -1.72
CCDC168Q8NDH2 OR1L6-202ENST00000373684 1044 ntBASIC4.28□□□□□ -1.72
CCDC168Q8NDH2 RPL31-204ENST00000409038 817 ntTSL 2 BASIC4.28□□□□□ -1.72
CCDC168Q8NDH2 RSU1P3-201ENST00000412878 835 ntBASIC4.28□□□□□ -1.72
CCDC168Q8NDH2 AC114755.2-201ENST00000413520 361 ntBASIC4.28□□□□□ -1.72
CCDC168Q8NDH2 AL451107.1-201ENST00000416310 408 ntTSL 2 BASIC4.28□□□□□ -1.72
CCDC168Q8NDH2 RPL12P43-201ENST00000420608 499 ntBASIC4.28□□□□□ -1.72
CCDC168Q8NDH2 AL161722.2-201ENST00000434731 981 ntBASIC4.28□□□□□ -1.72
CCDC168Q8NDH2 AL451136.1-201ENST00000435399 325 ntBASIC4.28□□□□□ -1.72
CCDC168Q8NDH2 LINC00973-201ENST00000473756 962 ntTSL 2 BASIC4.28□□□□□ -1.72
CCDC168Q8NDH2 AC110275.1-201ENST00000534420 623 ntAPPRIS P1 TSL 4 BASIC4.28□□□□□ -1.72
CCDC168Q8NDH2 AC005154.1-213ENST00000578572 445 ntTSL 3 BASIC4.28□□□□□ -1.72
CCDC168Q8NDH2 AC009237.13-201ENST00000603193 276 ntBASIC4.28□□□□□ -1.72
CCDC168Q8NDH2 AC245389.1-201ENST00000605141 529 ntBASIC4.28□□□□□ -1.72
CCDC168Q8NDH2 AL121873.1-201ENST00000616013 524 ntBASIC4.28□□□□□ -1.72
CCDC168Q8NDH2 GXYLT1P4-203ENST00000616580 641 ntTSL 1 (best) BASIC4.28□□□□□ -1.72
CCDC168Q8NDH2 MTAP-210ENST00000580900 7557 ntTSL 1 (best) BASIC4.28□□□□□ -1.72
CCDC168Q8NDH2 KIAA0586-203ENST00000423743 5339 ntAPPRIS ALT2 TSL 1 (best) BASIC4.28□□□□□ -1.73
CCDC168Q8NDH2 DCUN1D1-208ENST00000632685 3147 ntTSL 1 (best) BASIC4.28□□□□□ -1.73
CCDC168Q8NDH2 RABGAP1L-208ENST00000392064 6282 ntTSL 1 (best) BASIC4.27□□□□□ -1.73
CCDC168Q8NDH2 CYLD-201ENST00000311559 5371 ntTSL 5 BASIC4.27□□□□□ -1.73
CCDC168Q8NDH2 CNTN3-201ENST00000263665 4948 ntAPPRIS P1 TSL 1 (best) BASIC4.27□□□□□ -1.73
CCDC168Q8NDH2 NKRF-202ENST00000371527 3741 ntAPPRIS P1 TSL 1 (best) BASIC4.27□□□□□ -1.73
CCDC168Q8NDH2 SESN1-201ENST00000302071 2718 ntTSL 1 (best) BASIC4.27□□□□□ -1.73
CCDC168Q8NDH2 NSD3-206ENST00000527502 4471 ntTSL 1 (best) BASIC4.27□□□□□ -1.73
CCDC168Q8NDH2 ELAVL4-205ENST00000371824 3966 ntAPPRIS P5 TSL 1 (best) BASIC4.27□□□□□ -1.73
CCDC168Q8NDH2 TESPA1-203ENST00000524622 4188 ntAPPRIS ALT2 TSL 1 (best) BASIC4.27□□□□□ -1.73
CCDC168Q8NDH2 U3.3-201ENST00000362986 216 ntBASIC4.27□□□□□ -1.73
CCDC168Q8NDH2 KRT8P51-201ENST00000438938 274 ntBASIC4.27□□□□□ -1.73
CCDC168Q8NDH2 MRPL35P2-201ENST00000448009 511 ntBASIC4.27□□□□□ -1.73
CCDC168Q8NDH2 RPL7P19-201ENST00000469948 618 ntBASIC4.27□□□□□ -1.73
CCDC168Q8NDH2 NPM1P42-201ENST00000560329 862 ntBASIC4.27□□□□□ -1.73
CCDC168Q8NDH2 AC119868.1-202ENST00000584741 347 ntTSL 2 BASIC4.27□□□□□ -1.73
CCDC168Q8NDH2 AL121890.3-201ENST00000618494 516 ntBASIC4.27□□□□□ -1.73
CCDC168Q8NDH2 BX088651.2-201ENST00000425493 3614 ntTSL 2 BASIC4.27□□□□□ -1.73
CCDC168Q8NDH2 COL14A1-209ENST00000537875 3119 ntTSL 5 BASIC4.27□□□□□ -1.73
CCDC168Q8NDH2 ZEB1-205ENST00000446923 6267 ntAPPRIS ALT2 TSL 5 BASIC4.27□□□□□ -1.73
CCDC168Q8NDH2 ORMDL1-201ENST00000325795 2692 ntAPPRIS P1 TSL 1 (best) BASIC4.27□□□□□ -1.73
CCDC168Q8NDH2 N4BP2L2-IT2-201ENST00000629393 4890 ntBASIC4.27□□□□□ -1.73
CCDC168Q8NDH2 CASP12-212ENST00000613512 1451 ntAPPRIS P5 TSL 1 (best) BASIC4.27□□□□□ -1.73
Retrieved 100 of 98,524 protein–RNA pairs in 82.5 ms