Protein–RNA interactions for Protein: Q7M4L6

SHF, SH2 domain-containing adapter protein F, humanhuman

Predictions only

Length 423 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHFQ7M4L6 AP000295.1-201ENST00000433395 1000 ntAPPRIS P1 TSL 5 BASIC5.04□□□□□ -1.6
SHFQ7M4L6 LINC02528-202ENST00000434437 535 ntTSL 2 BASIC5.04□□□□□ -1.6
SHFQ7M4L6 VN1R110P-201ENST00000438988 971 ntBASIC5.04□□□□□ -1.6
SHFQ7M4L6 RRM2P4-201ENST00000441721 562 ntBASIC5.04□□□□□ -1.6
SHFQ7M4L6 AL138921.1-201ENST00000444359 846 ntTSL 5 BASIC5.04□□□□□ -1.6
SHFQ7M4L6 AC044797.1-201ENST00000445744 679 ntBASIC5.04□□□□□ -1.6
SHFQ7M4L6 BCAP29-207ENST00000445771 1157 ntTSL 5 BASIC5.04□□□□□ -1.6
SHFQ7M4L6 HMGB1P26-201ENST00000452520 628 ntBASIC5.04□□□□□ -1.6
SHFQ7M4L6 PPIAP27-201ENST00000453800 265 ntBASIC5.04□□□□□ -1.6
SHFQ7M4L6 AC239798.3-201ENST00000454459 408 ntBASIC5.04□□□□□ -1.6
SHFQ7M4L6 AC099344.3-201ENST00000454489 626 ntTSL 3 BASIC5.04□□□□□ -1.6
SHFQ7M4L6 RPS3AP53-201ENST00000454716 778 ntBASIC5.04□□□□□ -1.6
SHFQ7M4L6 AL390783.1-203ENST00000457058 248 ntTSL 3 BASIC5.04□□□□□ -1.6
SHFQ7M4L6 snoU109.3-201ENST00000459477 145 ntBASIC5.04□□□□□ -1.6
SHFQ7M4L6 UBFD1P1-201ENST00000473259 814 ntBASIC5.04□□□□□ -1.6
SHFQ7M4L6 AC098583.1-201ENST00000480875 255 ntBASIC5.04□□□□□ -1.6
SHFQ7M4L6 WDR78-207ENST00000488333 613 ntTSL 3 BASIC5.04□□□□□ -1.6
SHFQ7M4L6 HMGB1P38-201ENST00000490557 577 ntBASIC5.04□□□□□ -1.6
SHFQ7M4L6 CAPZA2-212ENST00000490693 809 ntTSL 2 BASIC5.04□□□□□ -1.6
SHFQ7M4L6 AC069304.1-201ENST00000491593 704 ntBASIC5.04□□□□□ -1.6
SHFQ7M4L6 SCGB3A2-202ENST00000504320 440 ntTSL 3 BASIC5.04□□□□□ -1.6
SHFQ7M4L6 AC096576.3-201ENST00000505528 721 ntTSL 5 BASIC5.04□□□□□ -1.6
SHFQ7M4L6 AC091917.1-201ENST00000506330 566 ntTSL 4 BASIC5.04□□□□□ -1.6
SHFQ7M4L6 AC122710.1-201ENST00000510622 553 ntTSL 5 BASIC5.04□□□□□ -1.6
SHFQ7M4L6 AC018797.1-201ENST00000510791 255 ntBASIC5.04□□□□□ -1.6
SHFQ7M4L6 RN7SKP253-201ENST00000516424 309 ntBASIC5.04□□□□□ -1.6
SHFQ7M4L6 SEPT10P1-201ENST00000517342 1162 ntBASIC5.04□□□□□ -1.6
SHFQ7M4L6 AC087439.2-201ENST00000519498 552 ntTSL 3 BASIC5.04□□□□□ -1.6
SHFQ7M4L6 LINC01609-201ENST00000519506 424 ntTSL 3 BASIC5.04□□□□□ -1.6
SHFQ7M4L6 IGKV3D-25-201ENST00000519599 235 ntBASIC5.04□□□□□ -1.6
SHFQ7M4L6 MTND2P32-201ENST00000521584 1038 ntBASIC5.04□□□□□ -1.6
SHFQ7M4L6 TMEM68-214ENST00000523073 536 ntTSL 3 BASIC5.04□□□□□ -1.6
SHFQ7M4L6 AP000916.1-201ENST00000533869 835 ntBASIC5.04□□□□□ -1.6
SHFQ7M4L6 MED21-206ENST00000546323 575 ntTSL 3 BASIC5.04□□□□□ -1.6
SHFQ7M4L6 MTND1P24-201ENST00000552175 861 ntBASIC5.04□□□□□ -1.6
SHFQ7M4L6 AC006530.1-201ENST00000555980 571 ntBASIC5.04□□□□□ -1.6
SHFQ7M4L6 AL356801.1-201ENST00000559320 294 ntBASIC5.04□□□□□ -1.6
SHFQ7M4L6 C15orf41-203ENST00000562489 715 ntTSL 2 BASIC5.04□□□□□ -1.6
SHFQ7M4L6 PPIAL4F-202ENST00000581138 660 ntAPPRIS P1 BASIC5.04□□□□□ -1.6
SHFQ7M4L6 PPIAL4E-201ENST00000581164 785 ntAPPRIS P1 BASIC5.04□□□□□ -1.6
SHFQ7M4L6 AC068020.1-201ENST00000594215 661 ntBASIC5.04□□□□□ -1.6
SHFQ7M4L6 AC130352.1-201ENST00000602979 661 ntBASIC5.04□□□□□ -1.6
SHFQ7M4L6 AP001437.1-201ENST00000608783 456 ntBASIC5.04□□□□□ -1.6
SHFQ7M4L6 AC124016.2-201ENST00000610058 665 ntBASIC5.04□□□□□ -1.6
SHFQ7M4L6 HTR1DP1-201ENST00000616500 888 ntBASIC5.04□□□□□ -1.6
SHFQ7M4L6 AL390964.1-201ENST00000622486 845 ntTSL 3 BASIC5.04□□□□□ -1.6
SHFQ7M4L6 LINC02033-201ENST00000623207 971 ntTSL 2 BASIC5.04□□□□□ -1.6
SHFQ7M4L6 TEX41-293ENST00000630451 690 ntTSL 5 BASIC5.04□□□□□ -1.6
SHFQ7M4L6 AC111152.1-202ENST00000635848 339 ntBASIC5.04□□□□□ -1.6
SHFQ7M4L6 MAPK6PS2-201ENST00000379571 2060 ntBASIC5.04□□□□□ -1.6
SHFQ7M4L6 ZNF418-205ENST00000595830 3543 ntAPPRIS P3 TSL 1 (best) BASIC5.04□□□□□ -1.6
SHFQ7M4L6 OR6C4-203ENST00000641851 4989 ntAPPRIS P1 BASIC5.04□□□□□ -1.6
SHFQ7M4L6 MMP8-201ENST00000236826 3056 ntAPPRIS P1 TSL 1 (best) BASIC5.04□□□□□ -1.6
SHFQ7M4L6 ACE2-201ENST00000252519 3393 ntAPPRIS P1 TSL 1 (best) BASIC5.04□□□□□ -1.6
SHFQ7M4L6 ST8SIA4-201ENST00000231461 6303 ntAPPRIS P1 TSL 1 (best) BASIC5.04□□□□□ -1.6
SHFQ7M4L6 AF287957.1-201ENST00000607368 1595 ntBASIC5.04□□□□□ -1.6
SHFQ7M4L6 AC005261.2-201ENST00000593427 4258 ntBASIC5.03□□□□□ -1.6
SHFQ7M4L6 FBXL13-207ENST00000455112 2274 ntTSL 1 (best) BASIC5.03□□□□□ -1.6
SHFQ7M4L6 C11orf54-206ENST00000528099 1862 ntAPPRIS P1 TSL 2 BASIC5.03□□□□□ -1.6
SHFQ7M4L6 OR4F5-202ENST00000641515 2618 ntAPPRIS P1 BASIC5.03□□□□□ -1.6
SHFQ7M4L6 MROH9-202ENST00000367759 3165 ntAPPRIS ALT2 TSL 5 BASIC5.03□□□□□ -1.6
SHFQ7M4L6 OR2AT4-203ENST00000641541 8795 ntAPPRIS P1 BASIC5.03□□□□□ -1.6
SHFQ7M4L6 KCTD16-201ENST00000507359 13950 ntAPPRIS P1 TSL 1 (best) BASIC5.03□□□□□ -1.6
SHFQ7M4L6 SLC12A6-216ENST00000560164 3744 ntTSL 2 BASIC5.03□□□□□ -1.6
SHFQ7M4L6 GRID2-208ENST00000611049 4844 ntTSL 1 (best) BASIC5.03□□□□□ -1.6
SHFQ7M4L6 AC104966.1-201ENST00000467010 1464 ntBASIC5.03□□□□□ -1.6
SHFQ7M4L6 RN7SKP74-201ENST00000362849 309 ntBASIC5.03□□□□□ -1.6
SHFQ7M4L6 U3.7-201ENST00000363668 216 ntBASIC5.03□□□□□ -1.6
SHFQ7M4L6 ASXL1-203ENST00000375689 812 ntTSL 5 BASIC5.03□□□□□ -1.6
SHFQ7M4L6 RNU6-468P-201ENST00000384003 109 ntBASIC5.03□□□□□ -1.6
SHFQ7M4L6 RMRPP5-201ENST00000411156 267 ntBASIC5.03□□□□□ -1.6
SHFQ7M4L6 MRPL53P1-201ENST00000414323 319 ntBASIC5.03□□□□□ -1.6
SHFQ7M4L6 BX284632.2-201ENST00000421091 399 ntBASIC5.03□□□□□ -1.6
SHFQ7M4L6 AC073283.2-202ENST00000426892 591 ntTSL 4 BASIC5.03□□□□□ -1.6
SHFQ7M4L6 AL359636.1-201ENST00000433572 522 ntTSL 3 BASIC5.03□□□□□ -1.6
SHFQ7M4L6 PCBP2P1-201ENST00000437262 977 ntBASIC5.03□□□□□ -1.6
SHFQ7M4L6 PA2G4P6-201ENST00000438325 1197 ntBASIC5.03□□□□□ -1.6
SHFQ7M4L6 DMD-AS3-201ENST00000439592 293 ntTSL 3 BASIC5.03□□□□□ -1.6
SHFQ7M4L6 AC073465.2-201ENST00000440938 498 ntBASIC5.03□□□□□ -1.6
SHFQ7M4L6 AL512605.1-202ENST00000441919 381 ntBASIC5.03□□□□□ -1.6
SHFQ7M4L6 MEOX2-AS1-201ENST00000442176 697 ntTSL 3 BASIC5.03□□□□□ -1.6
SHFQ7M4L6 AL355601.1-201ENST00000444701 427 ntTSL 3 BASIC5.03□□□□□ -1.6
SHFQ7M4L6 AL359955.2-201ENST00000445380 353 ntBASIC5.03□□□□□ -1.6
SHFQ7M4L6 TIMM8BP2-201ENST00000445940 251 ntBASIC5.03□□□□□ -1.6
SHFQ7M4L6 AL356270.1-201ENST00000456587 522 ntTSL 3 BASIC5.03□□□□□ -1.6
SHFQ7M4L6 RPS4XP12-201ENST00000461747 709 ntBASIC5.03□□□□□ -1.6
SHFQ7M4L6 RPL32P33-201ENST00000487023 394 ntBASIC5.03□□□□□ -1.6
SHFQ7M4L6 AC021006.1-201ENST00000489849 553 ntBASIC5.03□□□□□ -1.6
SHFQ7M4L6 AC093831.1-201ENST00000509166 434 ntTSL 3 BASIC5.03□□□□□ -1.6
SHFQ7M4L6 AC139720.1-201ENST00000509497 512 ntTSL 3 BASIC5.03□□□□□ -1.6
SHFQ7M4L6 BTG4P1-201ENST00000510421 183 ntBASIC5.03□□□□□ -1.6
SHFQ7M4L6 AC106894.1-201ENST00000511735 451 ntTSL 5 BASIC5.03□□□□□ -1.6
SHFQ7M4L6 IGLV3-24-201ENST00000517477 197 ntBASIC5.03□□□□□ -1.6
SHFQ7M4L6 BUD31P1-201ENST00000521828 359 ntBASIC5.03□□□□□ -1.6
SHFQ7M4L6 AC009884.1-201ENST00000522670 545 ntTSL 4 BASIC5.03□□□□□ -1.6
SHFQ7M4L6 AC079064.1-201ENST00000528365 362 ntBASIC5.03□□□□□ -1.6
SHFQ7M4L6 AP001267.3-204ENST00000528578 423 ntTSL 3 BASIC5.03□□□□□ -1.6
SHFQ7M4L6 PMS2P3-207ENST00000529061 717 ntBASIC5.03□□□□□ -1.6
SHFQ7M4L6 AC087894.1-201ENST00000538359 518 ntBASIC5.03□□□□□ -1.6
SHFQ7M4L6 MIR3154-201ENST00000577829 84 ntBASIC5.03□□□□□ -1.6
Retrieved 100 of 98,524 protein–RNA pairs in 89.1 ms