Protein–RNA interactions for Protein: Q4VC31

CCDC58, Coiled-coil domain-containing protein 58, humanhuman

Predictions only

Length 144 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC58Q4VC31 ZNF571-201ENST00000328550 4113 ntAPPRIS P1 TSL 1 (best) BASIC4.61□□□□□ -1.67
CCDC58Q4VC31 TBC1D15-201ENST00000319106 2159 ntTSL 2 BASIC4.61□□□□□ -1.67
CCDC58Q4VC31 SCN1A-218ENST00000640036 8131 ntAPPRIS ALT1 TSL 5 BASIC4.61□□□□□ -1.67
CCDC58Q4VC31 AC090181.3-201ENST00000624777 1514 ntBASIC4.61□□□□□ -1.67
CCDC58Q4VC31 TOPBP1-201ENST00000260810 5378 ntAPPRIS P1 TSL 1 (best) BASIC4.61□□□□□ -1.67
CCDC58Q4VC31 AHCTF1-201ENST00000326225 8633 ntAPPRIS P2 TSL 1 (best) BASIC4.61□□□□□ -1.67
CCDC58Q4VC31 CD86-204ENST00000469710 1604 ntTSL 2 BASIC4.61□□□□□ -1.67
CCDC58Q4VC31 AL355306.2-205ENST00000635395 1646 ntTSL 5 BASIC4.61□□□□□ -1.67
CCDC58Q4VC31 AL020995.1-201ENST00000427524 1680 ntTSL 2 BASIC4.61□□□□□ -1.67
CCDC58Q4VC31 ADAM29-213ENST00000615367 3386 ntAPPRIS P1 TSL 5 BASIC4.61□□□□□ -1.67
CCDC58Q4VC31 LMNTD1-201ENST00000282881 1718 ntAPPRIS P3 TSL 2 BASIC4.6□□□□□ -1.67
CCDC58Q4VC31 DSPP-202ENST00000399271 4331 ntAPPRIS P1 TSL 5 BASIC4.6□□□□□ -1.67
CCDC58Q4VC31 ATP7A-202ENST00000343533 8289 ntTSL 5 BASIC4.6□□□□□ -1.67
CCDC58Q4VC31 CSRNP3-202ENST00000342316 11684 ntAPPRIS P1 TSL 1 (best) BASIC4.6□□□□□ -1.67
CCDC58Q4VC31 AC087190.4-201ENST00000574616 8334 ntBASIC4.6□□□□□ -1.67
CCDC58Q4VC31 SENP7-202ENST00000348610 3272 ntAPPRIS ALT2 TSL 1 (best) BASIC4.6□□□□□ -1.67
CCDC58Q4VC31 CEP192-201ENST00000325971 7764 ntTSL 5 BASIC4.6□□□□□ -1.67
CCDC58Q4VC31 ERI2-202ENST00000357967 3499 ntAPPRIS P1 TSL 5 BASIC4.6□□□□□ -1.67
CCDC58Q4VC31 CLCA3P-201ENST00000284054 2407 ntTSL 5 BASIC4.6□□□□□ -1.67
CCDC58Q4VC31 AL139095.4-201ENST00000379928 500 ntTSL 2 BASIC4.6□□□□□ -1.67
CCDC58Q4VC31 AC109779.1-201ENST00000414475 573 ntTSL 5 BASIC4.6□□□□□ -1.67
CCDC58Q4VC31 EIF4A1P1-201ENST00000420241 934 ntBASIC4.6□□□□□ -1.67
CCDC58Q4VC31 RPL34P3-201ENST00000421454 338 ntBASIC4.6□□□□□ -1.67
CCDC58Q4VC31 LINC01740-201ENST00000423842 332 ntTSL 2 BASIC4.6□□□□□ -1.67
CCDC58Q4VC31 AL662874.1-201ENST00000426065 230 ntBASIC4.6□□□□□ -1.67
CCDC58Q4VC31 ARPP21-211ENST00000427542 568 ntTSL 4 BASIC4.6□□□□□ -1.67
CCDC58Q4VC31 RPS26P4-201ENST00000431743 355 ntBASIC4.6□□□□□ -1.67
CCDC58Q4VC31 ZDHHC20P1-204ENST00000435787 423 ntBASIC4.6□□□□□ -1.67
CCDC58Q4VC31 Z99127.1-201ENST00000452442 670 ntTSL 5 BASIC4.6□□□□□ -1.67
CCDC58Q4VC31 AC009365.2-201ENST00000453078 799 ntTSL 3 BASIC4.6□□□□□ -1.67
CCDC58Q4VC31 AC118758.1-202ENST00000454719 225 ntBASIC4.6□□□□□ -1.67
CCDC58Q4VC31 AC005674.1-201ENST00000503493 459 ntTSL 3 BASIC4.6□□□□□ -1.67
CCDC58Q4VC31 AC020551.1-201ENST00000512036 539 ntTSL 3 BASIC4.6□□□□□ -1.67
CCDC58Q4VC31 IGHVIII-2-1-201ENST00000518843 291 ntBASIC4.6□□□□□ -1.67
CCDC58Q4VC31 MFAP5-211ENST00000540087 492 ntTSL 1 (best) BASIC4.6□□□□□ -1.67
CCDC58Q4VC31 IFNG-AS1-203ENST00000541715 902 ntTSL 3 BASIC4.6□□□□□ -1.67
CCDC58Q4VC31 AL049872.1-201ENST00000556323 322 ntBASIC4.6□□□□□ -1.67
CCDC58Q4VC31 AC027808.1-201ENST00000560873 683 ntTSL 3 BASIC4.6□□□□□ -1.67
CCDC58Q4VC31 CNEP1R1-204ENST00000562576 656 ntTSL 5 BASIC4.6□□□□□ -1.67
CCDC58Q4VC31 AL031600.2-201ENST00000563223 307 ntTSL 5 BASIC4.6□□□□□ -1.67
CCDC58Q4VC31 CCDC58P1-201ENST00000578567 430 ntBASIC4.6□□□□□ -1.67
CCDC58Q4VC31 AP005242.1-201ENST00000583946 467 ntTSL 3 BASIC4.6□□□□□ -1.67
CCDC58Q4VC31 LINC01835-202ENST00000589345 450 ntTSL 3 BASIC4.6□□□□□ -1.67
CCDC58Q4VC31 FO681491.1-202ENST00000623392 737 ntBASIC4.6□□□□□ -1.67
CCDC58Q4VC31 AC132068.1-201ENST00000623805 459 ntBASIC4.6□□□□□ -1.67
CCDC58Q4VC31 STAU2-220ENST00000522695 2646 ntAPPRIS ALT1 TSL 1 (best) BASIC4.6□□□□□ -1.67
CCDC58Q4VC31 KMO-204ENST00000366559 5261 ntAPPRIS P2 TSL 1 (best) BASIC4.6□□□□□ -1.67
CCDC58Q4VC31 SLC9B1P1-201ENST00000331172 1337 ntBASIC4.6□□□□□ -1.67
CCDC58Q4VC31 FAM184A-212ENST00000522284 2721 ntTSL 1 (best) BASIC4.6□□□□□ -1.67
CCDC58Q4VC31 IRAK1BP1-204ENST00000607739 1387 ntTSL 2 BASIC4.6□□□□□ -1.67
CCDC58Q4VC31 KPNA2P2-201ENST00000419546 1489 ntBASIC4.6□□□□□ -1.67
CCDC58Q4VC31 PHACTR4-201ENST00000373836 3107 ntAPPRIS P4 TSL 5 BASIC4.6□□□□□ -1.67
CCDC58Q4VC31 ADAM29-202ENST00000404450 3171 ntAPPRIS P1 TSL 1 (best) BASIC4.6□□□□□ -1.67
CCDC58Q4VC31 PRG4-203ENST00000367485 4765 ntAPPRIS ALT2 TSL 5 BASIC4.6□□□□□ -1.67
CCDC58Q4VC31 ZNF534-204ENST00000433050 2047 ntAPPRIS ALT2 TSL 1 (best) BASIC4.6□□□□□ -1.67
CCDC58Q4VC31 ZNF273-204ENST00000476120 2000 ntAPPRIS P1 TSL 3 BASIC4.6□□□□□ -1.67
CCDC58Q4VC31 C2CD6-201ENST00000286195 2104 ntAPPRIS P3 TSL 1 (best) BASIC4.6□□□□□ -1.67
CCDC58Q4VC31 RC3H1-201ENST00000258349 10988 ntAPPRIS P3 TSL 1 (best) BASIC4.6□□□□□ -1.67
CCDC58Q4VC31 MS4A1-207ENST00000532073 2560 ntTSL 1 (best) BASIC4.59□□□□□ -1.67
CCDC58Q4VC31 AP000542.2-201ENST00000623199 6179 ntBASIC4.59□□□□□ -1.67
CCDC58Q4VC31 MYNN-203ENST00000544106 4815 ntTSL 1 (best) BASIC4.59□□□□□ -1.67
CCDC58Q4VC31 NPM1-202ENST00000351986 1237 ntTSL 1 (best) BASIC4.59□□□□□ -1.67
CCDC58Q4VC31 ADPRM-201ENST00000379774 1209 ntAPPRIS P1 TSL 1 (best) BASIC4.59□□□□□ -1.67
CCDC58Q4VC31 SNORA16A-201ENST00000384342 137 ntBASIC4.59□□□□□ -1.67
CCDC58Q4VC31 TRAV35-201ENST00000390462 330 ntBASIC4.59□□□□□ -1.67
CCDC58Q4VC31 KRTAP3-1-201ENST00000391588 594 ntAPPRIS P1 BASIC4.59□□□□□ -1.67
CCDC58Q4VC31 FOXP2-205ENST00000393489 2285 ntTSL 1 (best) BASIC4.59□□□□□ -1.67
CCDC58Q4VC31 AL035079.1-201ENST00000405210 287 ntBASIC4.59□□□□□ -1.67
CCDC58Q4VC31 HMGN1P20-201ENST00000411849 300 ntBASIC4.59□□□□□ -1.67
CCDC58Q4VC31 OR2AT2P-201ENST00000413438 905 ntBASIC4.59□□□□□ -1.67
CCDC58Q4VC31 AC093159.1-201ENST00000416845 424 ntTSL 3 BASIC4.59□□□□□ -1.67
CCDC58Q4VC31 AC013429.2-201ENST00000418798 781 ntBASIC4.59□□□□□ -1.67
CCDC58Q4VC31 AL513188.1-201ENST00000421167 614 ntTSL 3 BASIC4.59□□□□□ -1.67
CCDC58Q4VC31 LINC00458-201ENST00000423442 1060 ntTSL 1 (best) BASIC4.59□□□□□ -1.67
CCDC58Q4VC31 COX6CP13-201ENST00000428703 226 ntBASIC4.59□□□□□ -1.67
CCDC58Q4VC31 ALG13-AS1-201ENST00000430794 195 ntTSL 5 BASIC4.59□□□□□ -1.67
CCDC58Q4VC31 Z82198.2-201ENST00000434741 567 ntTSL 4 BASIC4.59□□□□□ -1.67
CCDC58Q4VC31 RPS11P7-201ENST00000442125 465 ntBASIC4.59□□□□□ -1.67
CCDC58Q4VC31 STK33-208ENST00000447869 3103 ntAPPRIS P1 TSL 1 (best) BASIC4.59□□□□□ -1.67
CCDC58Q4VC31 NPM1P39-201ENST00000449818 867 ntBASIC4.59□□□□□ -1.67
CCDC58Q4VC31 KCNMB2-AS1-205ENST00000451742 844 ntTSL 4 BASIC4.59□□□□□ -1.67
CCDC58Q4VC31 FGF7P3-201ENST00000454645 303 ntBASIC4.59□□□□□ -1.67
CCDC58Q4VC31 LINC01448-201ENST00000455947 1171 ntTSL 1 (best) BASIC4.59□□□□□ -1.67
CCDC58Q4VC31 UBA52P3-201ENST00000491303 382 ntBASIC4.59□□□□□ -1.67
CCDC58Q4VC31 PPM1AP1-201ENST00000502740 1135 ntBASIC4.59□□□□□ -1.67
CCDC58Q4VC31 AC068672.3-203ENST00000505166 311 ntTSL 3 BASIC4.59□□□□□ -1.67
CCDC58Q4VC31 SEMA6A-AS1-202ENST00000508424 862 ntTSL 3 BASIC4.59□□□□□ -1.67
CCDC58Q4VC31 LINC00992-202ENST00000514186 564 ntTSL 5 BASIC4.59□□□□□ -1.67
CCDC58Q4VC31 AZIN1-AS1-203ENST00000517996 756 ntTSL 3 BASIC4.59□□□□□ -1.67
CCDC58Q4VC31 RPL26L1-203ENST00000519239 679 ntAPPRIS P1 TSL 2 BASIC4.59□□□□□ -1.67
CCDC58Q4VC31 RPL23AP53-201ENST00000521854 457 ntBASIC4.59□□□□□ -1.67
CCDC58Q4VC31 POLR2K-203ENST00000522439 543 ntTSL 2 BASIC4.59□□□□□ -1.67
CCDC58Q4VC31 AP000873.2-204ENST00000530825 375 ntTSL 3 BASIC4.59□□□□□ -1.67
CCDC58Q4VC31 GAS2L3-203ENST00000539410 2229 ntAPPRIS P1 TSL 2 BASIC4.59□□□□□ -1.67
CCDC58Q4VC31 GLRXP2-201ENST00000555594 321 ntBASIC4.59□□□□□ -1.67
CCDC58Q4VC31 AC131532.1-201ENST00000555596 519 ntTSL 4 BASIC4.59□□□□□ -1.67
CCDC58Q4VC31 AGGF1P9-201ENST00000561884 913 ntBASIC4.59□□□□□ -1.67
CCDC58Q4VC31 DLGAP1-AS2-202ENST00000573177 1388 ntBASIC4.59□□□□□ -1.67
CCDC58Q4VC31 MIR4675-201ENST00000577898 77 ntBASIC4.59□□□□□ -1.67
CCDC58Q4VC31 AC138207.8-204ENST00000579588 527 ntBASIC4.59□□□□□ -1.67
Retrieved 100 of 98,524 protein–RNA pairs in 115.3 ms