Protein–RNA interactions for Protein: P78423

CX3CL1, Fractalkine, humanhuman

Predictions only

Length 397 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CX3CL1P78423 SERPINB7-207ENST00000546027 1951 ntAPPRIS P1 TSL 2 BASIC4.59□□□□□ -1.67
CX3CL1P78423 NELL2-211ENST00000548826 559 ntTSL 2 BASIC4.59□□□□□ -1.67
CX3CL1P78423 SEMA6D-210ENST00000558816 4419 ntTSL 5 BASIC4.59□□□□□ -1.67
CX3CL1P78423 AC009120.4-201ENST00000564455 513 ntTSL 5 BASIC4.59□□□□□ -1.67
CX3CL1P78423 AC092121.1-201ENST00000569452 202 ntBASIC4.59□□□□□ -1.67
CX3CL1P78423 AC090912.2-203ENST00000581177 477 ntTSL 3 BASIC4.59□□□□□ -1.67
CX3CL1P78423 AC090125.1-201ENST00000581541 493 ntTSL 3 BASIC4.59□□□□□ -1.67
CX3CL1P78423 SS18L2P2-201ENST00000583960 235 ntBASIC4.59□□□□□ -1.67
CX3CL1P78423 AC012254.4-201ENST00000588843 273 ntBASIC4.59□□□□□ -1.67
CX3CL1P78423 AL136084.2-212ENST00000589976 654 ntTSL 5 BASIC4.59□□□□□ -1.67
CX3CL1P78423 COX6CP7-201ENST00000597056 208 ntBASIC4.59□□□□□ -1.67
CX3CL1P78423 AC024075.3-201ENST00000601687 453 ntTSL 5 BASIC4.59□□□□□ -1.67
CX3CL1P78423 AL391001.1-201ENST00000602747 715 ntBASIC4.59□□□□□ -1.67
CX3CL1P78423 AC079610.2-201ENST00000604818 690 ntBASIC4.59□□□□□ -1.67
CX3CL1P78423 AL158050.2-201ENST00000605336 568 ntBASIC4.59□□□□□ -1.67
CX3CL1P78423 AC011374.2-201ENST00000607135 526 ntBASIC4.59□□□□□ -1.67
CX3CL1P78423 VN1R9P-201ENST00000614184 867 ntBASIC4.59□□□□□ -1.67
CX3CL1P78423 ZNF630-AS1-201ENST00000614448 397 ntTSL 3 BASIC4.59□□□□□ -1.67
CX3CL1P78423 LPAR4-205ENST00000614823 2155 ntAPPRIS P1 TSL 4 BASIC4.59□□□□□ -1.67
CX3CL1P78423 AC007786.3-201ENST00000615154 596 ntBASIC4.59□□□□□ -1.67
CX3CL1P78423 AC087633.2-201ENST00000618611 725 ntTSL 3 BASIC4.59□□□□□ -1.67
CX3CL1P78423 OR8G3P-202ENST00000641572 1255 ntBASIC4.59□□□□□ -1.67
CX3CL1P78423 AC103740.1-201ENST00000558888 7427 ntTSL 2 BASIC4.59□□□□□ -1.67
CX3CL1P78423 KCNJ1-204ENST00000392665 4074 ntAPPRIS P1 TSL 1 (best) BASIC4.59□□□□□ -1.68
CX3CL1P78423 ASXL3-201ENST00000269197 11399 ntAPPRIS P2 TSL 5 BASIC4.59□□□□□ -1.68
CX3CL1P78423 RWDD2A-201ENST00000369724 3744 ntAPPRIS P1 TSL 1 (best) BASIC4.59□□□□□ -1.68
CX3CL1P78423 PTPRR-204ENST00000440835 2818 ntAPPRIS ALT2 TSL 1 (best) BASIC4.59□□□□□ -1.68
CX3CL1P78423 WDR12-201ENST00000261015 8100 ntAPPRIS P1 TSL 1 (best) BASIC4.59□□□□□ -1.68
CX3CL1P78423 IL7R-201ENST00000303115 4626 ntAPPRIS P1 TSL 1 (best) BASIC4.58□□□□□ -1.68
CX3CL1P78423 AC020633.1-201ENST00000468439 2247 ntBASIC4.58□□□□□ -1.68
CX3CL1P78423 RBMX-203ENST00000431446 2004 ntTSL 2 BASIC4.58□□□□□ -1.68
CX3CL1P78423 ZNF615-201ENST00000376716 4048 ntAPPRIS P3 TSL 2 BASIC4.58□□□□□ -1.68
CX3CL1P78423 MAPK10-328ENST00000641553 4009 ntBASIC4.58□□□□□ -1.68
CX3CL1P78423 AC097063.1-201ENST00000426714 1797 ntBASIC4.58□□□□□ -1.68
CX3CL1P78423 PCDH15-207ENST00000395430 7002 ntTSL 5 BASIC4.58□□□□□ -1.68
CX3CL1P78423 CEP85L-201ENST00000360290 1736 ntTSL 1 (best) BASIC4.58□□□□□ -1.68
CX3CL1P78423 CCT8P1-201ENST00000413611 1657 ntBASIC4.58□□□□□ -1.68
CX3CL1P78423 CPXCR1-201ENST00000276127 1630 ntAPPRIS P1 TSL 1 (best) BASIC4.58□□□□□ -1.68
CX3CL1P78423 AL138828.1-203ENST00000419926 1570 ntTSL 1 (best) BASIC4.58□□□□□ -1.68
CX3CL1P78423 MTCO1P7-201ENST00000419523 1542 ntBASIC4.58□□□□□ -1.68
CX3CL1P78423 TNFAIP8-207ENST00000513374 1385 ntTSL 2 BASIC4.58□□□□□ -1.68
CX3CL1P78423 OR5A2-203ENST00000641673 9444 ntAPPRIS P1 BASIC4.58□□□□□ -1.68
CX3CL1P78423 ZNF788-203ENST00000430298 3941 ntTSL 2 BASIC4.58□□□□□ -1.68
CX3CL1P78423 SCGB3A2-201ENST00000296694 515 ntAPPRIS P1 TSL 1 (best) BASIC4.58□□□□□ -1.68
CX3CL1P78423 RNA5SP500-201ENST00000364486 119 ntBASIC4.58□□□□□ -1.68
CX3CL1P78423 AC087752.1-201ENST00000391360 558 ntBASIC4.58□□□□□ -1.68
CX3CL1P78423 HMGB3P19-201ENST00000403971 560 ntBASIC4.58□□□□□ -1.68
CX3CL1P78423 HMGB1P13-201ENST00000406019 642 ntBASIC4.58□□□□□ -1.68
CX3CL1P78423 AC008173.1-201ENST00000418901 264 ntBASIC4.58□□□□□ -1.68
CX3CL1P78423 MTCO3P4-201ENST00000419236 787 ntBASIC4.58□□□□□ -1.68
CX3CL1P78423 AK4P4-201ENST00000419465 646 ntBASIC4.58□□□□□ -1.68
CX3CL1P78423 DCN-203ENST00000420120 753 ntTSL 1 (best) BASIC4.58□□□□□ -1.68
CX3CL1P78423 AC023128.2-201ENST00000420880 1223 ntBASIC4.58□□□□□ -1.68
CX3CL1P78423 AL162430.2-201ENST00000422306 435 ntTSL 3 BASIC4.58□□□□□ -1.68
CX3CL1P78423 MGAT2P2-201ENST00000427194 797 ntBASIC4.58□□□□□ -1.68
CX3CL1P78423 AC099060.1-201ENST00000427806 448 ntTSL 3 BASIC4.58□□□□□ -1.68
CX3CL1P78423 FO393419.3-201ENST00000428741 282 ntBASIC4.58□□□□□ -1.68
CX3CL1P78423 AC092168.2-201ENST00000430586 717 ntTSL 3 BASIC4.58□□□□□ -1.68
CX3CL1P78423 FTO-202ENST00000431610 707 ntTSL 3 BASIC4.58□□□□□ -1.68
CX3CL1P78423 AL136987.1-201ENST00000434300 396 ntTSL 5 BASIC4.58□□□□□ -1.68
CX3CL1P78423 DCN-205ENST00000441303 519 ntTSL 1 (best) BASIC4.58□□□□□ -1.68
CX3CL1P78423 AL355601.1-201ENST00000444701 427 ntTSL 3 BASIC4.58□□□□□ -1.68
CX3CL1P78423 HMGN1P2-201ENST00000445197 310 ntBASIC4.58□□□□□ -1.68
CX3CL1P78423 AL035551.1-201ENST00000446931 348 ntBASIC4.58□□□□□ -1.68
CX3CL1P78423 OR7E116P-201ENST00000448529 957 ntBASIC4.58□□□□□ -1.68
CX3CL1P78423 SEPT7P3-201ENST00000455017 621 ntBASIC4.58□□□□□ -1.68
CX3CL1P78423 RPL12P39-201ENST00000455456 496 ntBASIC4.58□□□□□ -1.68
CX3CL1P78423 LINC01075-201ENST00000455977 370 ntTSL 3 BASIC4.58□□□□□ -1.68
CX3CL1P78423 DCN-206ENST00000456569 228 ntTSL 1 (best) BASIC4.58□□□□□ -1.68
CX3CL1P78423 RPL21P18-201ENST00000469899 480 ntBASIC4.58□□□□□ -1.68
CX3CL1P78423 SEPT7P9-201ENST00000475691 413 ntTSL 1 (best) BASIC4.58□□□□□ -1.68
CX3CL1P78423 LINC00518-204ENST00000491317 1228 ntTSL 2 BASIC4.58□□□□□ -1.68
CX3CL1P78423 OR7E157P-201ENST00000494376 911 ntBASIC4.58□□□□□ -1.68
CX3CL1P78423 AC004069.1-201ENST00000504082 549 ntTSL 4 BASIC4.58□□□□□ -1.68
CX3CL1P78423 SCGB3A2-202ENST00000504320 440 ntTSL 3 BASIC4.58□□□□□ -1.68
CX3CL1P78423 AC006499.4-201ENST00000510947 694 ntBASIC4.58□□□□□ -1.68
CX3CL1P78423 LINC02432-203ENST00000511213 719 ntTSL 2 BASIC4.58□□□□□ -1.68
CX3CL1P78423 AC074255.1-201ENST00000511259 501 ntBASIC4.58□□□□□ -1.68
CX3CL1P78423 RNA5SP271-201ENST00000516700 88 ntBASIC4.58□□□□□ -1.68
CX3CL1P78423 IGLV3-30-201ENST00000524362 298 ntBASIC4.58□□□□□ -1.68
CX3CL1P78423 AP001267.3-204ENST00000528578 423 ntTSL 3 BASIC4.58□□□□□ -1.68
CX3CL1P78423 HMGB1P42-201ENST00000532126 553 ntBASIC4.58□□□□□ -1.68
CX3CL1P78423 ANAPC15-205ENST00000535503 734 ntAPPRIS P3 TSL 3 BASIC4.58□□□□□ -1.68
CX3CL1P78423 AP000763.3-201ENST00000542598 334 ntTSL 5 BASIC4.58□□□□□ -1.68
CX3CL1P78423 AC008083.2-201ENST00000546707 476 ntBASIC4.58□□□□□ -1.68
CX3CL1P78423 AC007569.1-202ENST00000547282 303 ntTSL 3 BASIC4.58□□□□□ -1.68
CX3CL1P78423 AL445363.1-202ENST00000553697 545 ntTSL 3 BASIC4.58□□□□□ -1.68
CX3CL1P78423 AC091544.7-201ENST00000554000 240 ntTSL 3 BASIC4.58□□□□□ -1.68
CX3CL1P78423 AL358913.1-201ENST00000554342 121 ntBASIC4.58□□□□□ -1.68
CX3CL1P78423 AL357172.1-201ENST00000556016 593 ntTSL 3 BASIC4.58□□□□□ -1.68
CX3CL1P78423 SPINK14-202ENST00000562793 157 ntTSL 5 BASIC4.58□□□□□ -1.68
CX3CL1P78423 ARPP19-204ENST00000563277 955 ntTSL 2 BASIC4.58□□□□□ -1.68
CX3CL1P78423 AC027130.1-201ENST00000564490 686 ntTSL 2 BASIC4.58□□□□□ -1.68
CX3CL1P78423 AC090666.1-201ENST00000578241 445 ntBASIC4.58□□□□□ -1.68
CX3CL1P78423 AC023394.1-201ENST00000578673 312 ntTSL 5 BASIC4.58□□□□□ -1.68
CX3CL1P78423 BNIP3P40-201ENST00000596017 556 ntBASIC4.58□□□□□ -1.68
CX3CL1P78423 AC239809.3-206ENST00000596091 741 ntTSL 5 BASIC4.58□□□□□ -1.68
CX3CL1P78423 AL157392.3-211ENST00000599378 509 ntTSL 4 BASIC4.58□□□□□ -1.68
CX3CL1P78423 AC018618.2-201ENST00000604770 446 ntBASIC4.58□□□□□ -1.68
CX3CL1P78423 AC108865.2-201ENST00000606881 432 ntBASIC4.58□□□□□ -1.68
Retrieved 100 of 98,524 protein–RNA pairs in 69.4 ms