Protein–RNA interactions for Protein: P61619

SEC61A1, Protein transport protein Sec61 subunit alpha isoform 1, humanhuman

Known RBP Predictions only

Length 476 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SEC61A1P61619 AP001605.1-201ENST00000420186 2603 ntTSL 1 (best) BASIC4.98□□□□□ -1.61
SEC61A1P61619 ZNF429-209ENST00000618549 1889 ntTSL 5 BASIC4.98□□□□□ -1.61
SEC61A1P61619 PCDH15-217ENST00000414778 9234 ntAPPRIS ALT2 TSL 5 BASIC4.98□□□□□ -1.61
SEC61A1P61619 PCDH15-227ENST00000614895 9249 ntAPPRIS ALT2 TSL 5 BASIC4.98□□□□□ -1.61
SEC61A1P61619 PGM3-211ENST00000512866 2013 ntTSL 1 (best) BASIC4.97□□□□□ -1.61
SEC61A1P61619 PIGA-206ENST00000542278 3626 ntAPPRIS P1 TSL 5 BASIC4.97□□□□□ -1.61
SEC61A1P61619 GCSAML-201ENST00000366488 3820 ntAPPRIS P3 TSL 1 (best) BASIC4.97□□□□□ -1.61
SEC61A1P61619 MECOM-217ENST00000494292 3939 ntAPPRIS ALT2 TSL 5 BASIC4.97□□□□□ -1.61
SEC61A1P61619 DNA2-201ENST00000358410 4208 ntAPPRIS P1 TSL 1 (best) BASIC4.97□□□□□ -1.61
SEC61A1P61619 LGI1-202ENST00000371418 2381 ntAPPRIS P1 TSL 1 (best) BASIC4.97□□□□□ -1.61
SEC61A1P61619 MRRFP1-201ENST00000435941 1675 ntBASIC4.97□□□□□ -1.61
SEC61A1P61619 IFNG-201ENST00000229135 1218 ntAPPRIS P1 TSL 1 (best) BASIC4.97□□□□□ -1.61
SEC61A1P61619 CLEC2D-201ENST00000261339 465 ntTSL 1 (best) BASIC4.97□□□□□ -1.61
SEC61A1P61619 OR4S2-201ENST00000312422 936 ntAPPRIS P1 BASIC4.97□□□□□ -1.61
SEC61A1P61619 OR52B3P-201ENST00000314715 928 ntBASIC4.97□□□□□ -1.61
SEC61A1P61619 NAP1L4P1-201ENST00000319092 1157 ntBASIC4.97□□□□□ -1.61
SEC61A1P61619 BPY2-201ENST00000331070 1206 ntAPPRIS P5 TSL 1 (best) BASIC4.97□□□□□ -1.61
SEC61A1P61619 BX248415.1-201ENST00000367421 1043 ntAPPRIS P1 TSL 1 (best) BASIC4.97□□□□□ -1.61
SEC61A1P61619 BPY2C-201ENST00000382287 1206 ntAPPRIS P5 TSL 1 (best) BASIC4.97□□□□□ -1.61
SEC61A1P61619 BPY2B-201ENST00000382392 1206 ntAPPRIS P5 TSL 1 (best) BASIC4.97□□□□□ -1.61
SEC61A1P61619 TRGV10-201ENST00000390341 512 ntAPPRIS P1 BASIC4.97□□□□□ -1.61
SEC61A1P61619 TRBV23-1-201ENST00000390396 347 ntAPPRIS P1 BASIC4.97□□□□□ -1.61
SEC61A1P61619 MIR1203-201ENST00000408812 85 ntBASIC4.97□□□□□ -1.61
SEC61A1P61619 AL355300.1-201ENST00000412439 187 ntTSL 3 BASIC4.97□□□□□ -1.61
SEC61A1P61619 AC104653.1-201ENST00000420579 578 ntTSL 2 BASIC4.97□□□□□ -1.61
SEC61A1P61619 NAALADL2-AS2-201ENST00000424690 1038 ntTSL 5 BASIC4.97□□□□□ -1.61
SEC61A1P61619 PPEF1-AS1-201ENST00000430641 430 ntTSL 5 BASIC4.97□□□□□ -1.61
SEC61A1P61619 LINC00383-201ENST00000433664 817 ntTSL 3 BASIC4.97□□□□□ -1.61
SEC61A1P61619 AL359878.2-201ENST00000435531 407 ntTSL 3 BASIC4.97□□□□□ -1.61
SEC61A1P61619 AC096775.1-201ENST00000437724 448 ntBASIC4.97□□□□□ -1.61
SEC61A1P61619 VN1R110P-201ENST00000438988 971 ntBASIC4.97□□□□□ -1.61
SEC61A1P61619 BMS1P10-201ENST00000443754 1120 ntBASIC4.97□□□□□ -1.61
SEC61A1P61619 LINC01809-201ENST00000448431 303 ntTSL 1 (best) BASIC4.97□□□□□ -1.61
SEC61A1P61619 GEMIN2P1-201ENST00000454246 752 ntBASIC4.97□□□□□ -1.61
SEC61A1P61619 LRRC77P-202ENST00000463642 457 ntTSL 4 BASIC4.97□□□□□ -1.61
SEC61A1P61619 AC117386.1-201ENST00000474444 606 ntTSL 4 BASIC4.97□□□□□ -1.61
SEC61A1P61619 AC008629.2-201ENST00000503783 483 ntBASIC4.97□□□□□ -1.61
SEC61A1P61619 AC112695.1-201ENST00000504213 592 ntTSL 2 BASIC4.97□□□□□ -1.61
SEC61A1P61619 PSMA2P2-201ENST00000504319 686 ntBASIC4.97□□□□□ -1.61
SEC61A1P61619 AC112518.2-201ENST00000508565 425 ntBASIC4.97□□□□□ -1.61
SEC61A1P61619 AC121161.1-201ENST00000510606 652 ntBASIC4.97□□□□□ -1.61
SEC61A1P61619 LINC02057-202ENST00000511794 577 ntTSL 3 BASIC4.97□□□□□ -1.61
SEC61A1P61619 AC104827.1-202ENST00000511917 1049 ntTSL 1 (best) BASIC4.97□□□□□ -1.61
SEC61A1P61619 SNORA19.3-201ENST00000516165 130 ntBASIC4.97□□□□□ -1.61
SEC61A1P61619 AC090150.2-201ENST00000521869 815 ntTSL 3 BASIC4.97□□□□□ -1.61
SEC61A1P61619 OR8G5-201ENST00000524943 1041 ntBASIC4.97□□□□□ -1.61
SEC61A1P61619 LSM3P2-201ENST00000551246 273 ntBASIC4.97□□□□□ -1.61
SEC61A1P61619 OTX2-203ENST00000554559 715 ntTSL 5 BASIC4.97□□□□□ -1.61
SEC61A1P61619 LINC02345-203ENST00000558897 405 ntTSL 3 BASIC4.97□□□□□ -1.61
SEC61A1P61619 AC048382.2-201ENST00000560239 492 ntTSL 2 BASIC4.97□□□□□ -1.61
SEC61A1P61619 LINC00254-201ENST00000563416 662 ntTSL 3 BASIC4.97□□□□□ -1.61
SEC61A1P61619 THCAT158-201ENST00000575039 535 ntTSL 5 BASIC4.97□□□□□ -1.61
SEC61A1P61619 AC022211.1-201ENST00000579554 717 ntTSL 3 BASIC4.97□□□□□ -1.61
SEC61A1P61619 AL157938.2-202ENST00000588378 875 ntTSL 5 BASIC4.97□□□□□ -1.61
SEC61A1P61619 AP2S1-210ENST00000601649 315 ntTSL 3 BASIC4.97□□□□□ -1.61
SEC61A1P61619 AL513327.3-201ENST00000602618 469 ntBASIC4.97□□□□□ -1.61
SEC61A1P61619 AC093424.1-201ENST00000604999 338 ntBASIC4.97□□□□□ -1.61
SEC61A1P61619 AL512427.1-201ENST00000618593 349 ntBASIC4.97□□□□□ -1.61
SEC61A1P61619 AL445670.1-201ENST00000618889 801 ntBASIC4.97□□□□□ -1.61
SEC61A1P61619 AC026124.2-201ENST00000621847 656 ntBASIC4.97□□□□□ -1.61
SEC61A1P61619 AC138907.10-201ENST00000623708 983 ntBASIC4.97□□□□□ -1.61
SEC61A1P61619 DARS-AS1-227ENST00000627442 633 ntTSL 5 BASIC4.97□□□□□ -1.61
SEC61A1P61619 LINC00254-202ENST00000633813 439 ntTSL 3 BASIC4.97□□□□□ -1.61
SEC61A1P61619 AL357060.1-201ENST00000638039 977 ntTSL 5 BASIC4.97□□□□□ -1.61
SEC61A1P61619 AC008691.1-209ENST00000642094 814 ntBASIC4.97□□□□□ -1.61
SEC61A1P61619 AL360270.2-201ENST00000562952 5985 ntBASIC4.97□□□□□ -1.61
SEC61A1P61619 ZNF347-201ENST00000334197 7960 ntAPPRIS P3 TSL 1 (best) BASIC4.97□□□□□ -1.61
SEC61A1P61619 SEC24D-211ENST00000511481 2626 ntTSL 1 (best) BASIC4.97□□□□□ -1.61
SEC61A1P61619 CNKSR2-202ENST00000379510 5315 ntAPPRIS P1 TSL 1 (best) BASIC4.97□□□□□ -1.61
SEC61A1P61619 MAP3K2-201ENST00000344908 2135 ntAPPRIS P1 TSL 1 (best) BASIC4.97□□□□□ -1.61
SEC61A1P61619 PCDH15-201ENST00000320301 6845 ntTSL 1 (best) BASIC4.97□□□□□ -1.61
SEC61A1P61619 CRB1-211ENST00000638467 4348 ntTSL 1 (best) BASIC4.97□□□□□ -1.61
SEC61A1P61619 ZNF230-201ENST00000429154 4115 ntAPPRIS P1 TSL 1 (best) BASIC4.97□□□□□ -1.61
SEC61A1P61619 ZFP14-201ENST00000270001 7489 ntAPPRIS P1 TSL 1 (best) BASIC4.97□□□□□ -1.61
SEC61A1P61619 KIAA0391-209ENST00000604948 1706 ntAPPRIS ALT2 TSL 2 BASIC4.97□□□□□ -1.61
SEC61A1P61619 AC011933.2-201ENST00000578539 2790 ntBASIC4.97□□□□□ -1.61
SEC61A1P61619 OR8J3-204ENST00000642058 3806 ntAPPRIS P1 BASIC4.97□□□□□ -1.61
SEC61A1P61619 CCT6B-203ENST00000436961 1639 ntTSL 2 BASIC4.97□□□□□ -1.61
SEC61A1P61619 AC025428.2-201ENST00000435367 2672 ntTSL 1 (best) BASIC4.97□□□□□ -1.61
SEC61A1P61619 AC017002.4-201ENST00000604721 1525 ntBASIC4.97□□□□□ -1.61
SEC61A1P61619 ARHGAP18-201ENST00000368149 4462 ntAPPRIS P1 TSL 1 (best) BASIC4.97□□□□□ -1.61
SEC61A1P61619 SLC26A5-208ENST00000393730 2498 ntTSL 1 (best) BASIC4.97□□□□□ -1.61
SEC61A1P61619 LIPI-204ENST00000614229 1439 ntTSL 1 (best) BASIC4.97□□□□□ -1.61
SEC61A1P61619 TOX3-202ENST00000407228 3124 ntAPPRIS ALT2 TSL 2 BASIC4.97□□□□□ -1.61
SEC61A1P61619 RAP1GDS1-202ENST00000339360 2092 ntAPPRIS ALT1 TSL 1 (best) BASIC4.96□□□□□ -1.61
SEC61A1P61619 ATP2C1-210ENST00000505330 4888 ntAPPRIS ALT2 TSL 2 BASIC4.96□□□□□ -1.61
SEC61A1P61619 AC007938.2-201ENST00000604666 2634 ntBASIC4.96□□□□□ -1.61
SEC61A1P61619 FOXN2-201ENST00000340553 5408 ntAPPRIS P1 TSL 1 (best) BASIC4.96□□□□□ -1.61
SEC61A1P61619 ELMO1-203ENST00000396045 2524 ntTSL 1 (best) BASIC4.96□□□□□ -1.61
SEC61A1P61619 MPDZ-212ENST00000538841 3186 ntTSL 2 BASIC4.96□□□□□ -1.61
SEC61A1P61619 NADK2-203ENST00000397338 3614 ntTSL 2 BASIC4.96□□□□□ -1.61
SEC61A1P61619 ZNF780A-204ENST00000455521 3600 ntAPPRIS ALT2 TSL 5 BASIC4.96□□□□□ -1.61
SEC61A1P61619 SEM1-202ENST00000356686 2667 ntTSL 5 BASIC4.96□□□□□ -1.62
SEC61A1P61619 ZNF678-201ENST00000343776 8556 ntAPPRIS P1 TSL 1 (best) BASIC4.96□□□□□ -1.62
SEC61A1P61619 ELF1-204ENST00000625359 2032 ntTSL 2 BASIC4.96□□□□□ -1.62
SEC61A1P61619 AC027088.4-201ENST00000611559 1947 ntBASIC4.96□□□□□ -1.62
SEC61A1P61619 ICE2P1-201ENST00000512800 1849 ntBASIC4.96□□□□□ -1.62
SEC61A1P61619 AC010132.2-201ENST00000295493 1043 ntBASIC4.96□□□□□ -1.62
SEC61A1P61619 SELENOWP1-201ENST00000322792 252 ntBASIC4.96□□□□□ -1.62
SEC61A1P61619 OR56A3-201ENST00000329564 948 ntAPPRIS P1 BASIC4.96□□□□□ -1.62
Retrieved 100 of 98,524 protein–RNA pairs in 75.4 ms