Protein–RNA interactions for Protein: P55289

CDH12, Cadherin-12, humanhuman

Predictions only

Length 794 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH12P55289 AC044797.1-201ENST00000445744 679 ntBASIC5.17□□□□□ -1.58
CDH12P55289 AC098826.2-201ENST00000452011 651 ntBASIC5.17□□□□□ -1.58
CDH12P55289 AC005165.2-201ENST00000466070 380 ntBASIC5.17□□□□□ -1.58
CDH12P55289 SYT14P1-201ENST00000481459 721 ntBASIC5.17□□□□□ -1.58
CDH12P55289 AC025458.1-201ENST00000506046 166 ntBASIC5.17□□□□□ -1.58
CDH12P55289 NPM1P21-201ENST00000513394 762 ntBASIC5.17□□□□□ -1.58
CDH12P55289 IGLV3-24-201ENST00000517477 197 ntBASIC5.17□□□□□ -1.58
CDH12P55289 AC011853.1-201ENST00000518911 454 ntBASIC5.17□□□□□ -1.58
CDH12P55289 MAL2-207ENST00000522828 603 ntTSL 3 BASIC5.17□□□□□ -1.58
CDH12P55289 AC022874.1-201ENST00000526382 550 ntTSL 3 BASIC5.17□□□□□ -1.58
CDH12P55289 PIWIL4-203ENST00000537419 831 ntTSL 2 BASIC5.17□□□□□ -1.58
CDH12P55289 OR52E8-201ENST00000537935 1061 ntAPPRIS P1 BASIC5.17□□□□□ -1.58
CDH12P55289 FRMD6-AS2-201ENST00000556617 548 ntTSL 4 BASIC5.17□□□□□ -1.58
CDH12P55289 ETFRF1-211ENST00000557540 1259 ntAPPRIS ALT1 TSL 2 BASIC5.17□□□□□ -1.58
CDH12P55289 AC009120.4-201ENST00000564455 513 ntTSL 5 BASIC5.17□□□□□ -1.58
CDH12P55289 AC009167.1-201ENST00000568317 579 ntTSL 4 BASIC5.17□□□□□ -1.58
CDH12P55289 AC136443.4-201ENST00000568759 579 ntTSL 4 BASIC5.17□□□□□ -1.58
CDH12P55289 CASC22-201ENST00000569713 386 ntTSL 5 BASIC5.17□□□□□ -1.58
CDH12P55289 AC019322.1-201ENST00000571869 389 ntBASIC5.17□□□□□ -1.58
CDH12P55289 AC099850.2-201ENST00000577660 557 ntAPPRIS P1 TSL 3 BASIC5.17□□□□□ -1.58
CDH12P55289 MIR7853-201ENST00000584820 132 ntBASIC5.17□□□□□ -1.58
CDH12P55289 AC010503.3-201ENST00000594355 540 ntBASIC5.17□□□□□ -1.58
CDH12P55289 ZNF486-202ENST00000597083 734 ntTSL 3 BASIC5.17□□□□□ -1.58
CDH12P55289 Metazoa_SRP.43-201ENST00000616394 271 ntBASIC5.17□□□□□ -1.58
CDH12P55289 AC024884.1-201ENST00000620583 399 ntBASIC5.17□□□□□ -1.58
CDH12P55289 CU638689.1-201ENST00000623225 897 ntTSL 3 BASIC5.17□□□□□ -1.58
CDH12P55289 CU634019.4-201ENST00000623347 897 ntTSL 3 BASIC5.17□□□□□ -1.58
CDH12P55289 AC068787.1-201ENST00000623908 691 ntBASIC5.17□□□□□ -1.58
CDH12P55289 PRKCH-228ENST00000640011 285 ntTSL 5 BASIC5.17□□□□□ -1.58
CDH12P55289 KLHL13-206ENST00000469946 2353 ntTSL 2 BASIC5.17□□□□□ -1.58
CDH12P55289 GSTM2-206ENST00000442650 1478 ntTSL 5 BASIC5.17□□□□□ -1.58
CDH12P55289 LARS-201ENST00000274562 2213 ntTSL 2 BASIC5.17□□□□□ -1.58
CDH12P55289 AC008432.1-201ENST00000615912 1320 ntBASIC5.17□□□□□ -1.58
CDH12P55289 ZNF677-201ENST00000333952 3422 ntAPPRIS P1 TSL 2 BASIC5.17□□□□□ -1.58
CDH12P55289 PLEKHG7-201ENST00000344636 3868 ntTSL 5 BASIC5.17□□□□□ -1.58
CDH12P55289 NFE2L2-204ENST00000423513 1382 ntTSL 1 (best) BASIC5.16□□□□□ -1.58
CDH12P55289 CD200R1L-204ENST00000488794 1597 ntAPPRIS ALT2 TSL 5 BASIC5.16□□□□□ -1.58
CDH12P55289 OR8J3-204ENST00000642058 3806 ntAPPRIS P1 BASIC5.16□□□□□ -1.58
CDH12P55289 SLC26A5-207ENST00000393729 2422 ntTSL 5 BASIC5.16□□□□□ -1.58
CDH12P55289 TMEM68-209ENST00000521229 2400 ntTSL 1 (best) BASIC5.16□□□□□ -1.58
CDH12P55289 POLK-210ENST00000508526 2019 ntTSL 1 (best) BASIC5.16□□□□□ -1.58
CDH12P55289 AL132656.2-201ENST00000482985 1837 ntTSL 5 BASIC5.16□□□□□ -1.58
CDH12P55289 AC079298.1-201ENST00000625026 1619 ntBASIC5.16□□□□□ -1.58
CDH12P55289 OFD1P8Y-201ENST00000449148 1433 ntBASIC5.16□□□□□ -1.58
CDH12P55289 AC089984.1-201ENST00000552780 1431 ntTSL 3 BASIC5.16□□□□□ -1.58
CDH12P55289 AC092111.2-201ENST00000611627 1414 ntBASIC5.16□□□□□ -1.58
CDH12P55289 PEAK1-201ENST00000312493 11512 ntAPPRIS P1 TSL 5 BASIC5.16□□□□□ -1.58
CDH12P55289 AC112255.1-201ENST00000624070 2493 ntBASIC5.16□□□□□ -1.58
CDH12P55289 DDAH1-204ENST00000535924 3909 ntTSL 1 (best) BASIC5.16□□□□□ -1.58
CDH12P55289 RBMY1F-201ENST00000303766 1887 ntAPPRIS P5 TSL 1 (best) BASIC5.16□□□□□ -1.58
CDH12P55289 ALCAM-205ENST00000472644 4189 ntTSL 1 (best) BASIC5.16□□□□□ -1.58
CDH12P55289 ZNF678-201ENST00000343776 8556 ntAPPRIS P1 TSL 1 (best) BASIC5.16□□□□□ -1.58
CDH12P55289 SLC17A4-202ENST00000397076 2331 ntTSL 2 BASIC5.16□□□□□ -1.58
CDH12P55289 GABRG1-201ENST00000295452 6785 ntAPPRIS P1 TSL 1 (best) BASIC5.16□□□□□ -1.58
CDH12P55289 RNU5E-10P-201ENST00000363506 118 ntBASIC5.16□□□□□ -1.58
CDH12P55289 UBE2U-201ENST00000371076 1136 ntAPPRIS P2 TSL 1 (best) BASIC5.16□□□□□ -1.58
CDH12P55289 RNU6-468P-201ENST00000384003 109 ntBASIC5.16□□□□□ -1.58
CDH12P55289 RNU6-1005P-201ENST00000384519 107 ntBASIC5.16□□□□□ -1.58
CDH12P55289 AC004386.1-201ENST00000393214 761 ntBASIC5.16□□□□□ -1.58
CDH12P55289 MIR1203-201ENST00000408812 85 ntBASIC5.16□□□□□ -1.58
CDH12P55289 AC092652.1-202ENST00000413315 587 ntTSL 4 BASIC5.16□□□□□ -1.58
CDH12P55289 ODF2-AS1-201ENST00000420801 407 ntTSL 3 BASIC5.16□□□□□ -1.58
CDH12P55289 AC241520.1-201ENST00000422654 1099 ntBASIC5.16□□□□□ -1.58
CDH12P55289 RIMKLBP2-201ENST00000424737 654 ntBASIC5.16□□□□□ -1.58
CDH12P55289 AC092920.1-201ENST00000428516 678 ntTSL 5 BASIC5.16□□□□□ -1.58
CDH12P55289 AC069154.1-201ENST00000432914 542 ntBASIC5.16□□□□□ -1.58
CDH12P55289 AL450384.1-201ENST00000433526 413 ntTSL 2 BASIC5.16□□□□□ -1.58
CDH12P55289 AC110602.1-201ENST00000437414 318 ntBASIC5.16□□□□□ -1.58
CDH12P55289 AL138787.1-202ENST00000437804 898 ntBASIC5.16□□□□□ -1.58
CDH12P55289 AC079117.1-201ENST00000445178 1000 ntTSL 1 (best) BASIC5.16□□□□□ -1.58
CDH12P55289 AP001604.1-201ENST00000447384 954 ntTSL 1 (best) BASIC5.16□□□□□ -1.58
CDH12P55289 AL009048.1-201ENST00000450437 298 ntBASIC5.16□□□□□ -1.58
CDH12P55289 RSRC1-207ENST00000475278 1195 ntTSL 5 BASIC5.16□□□□□ -1.58
CDH12P55289 EIF1P7-201ENST00000487533 337 ntBASIC5.16□□□□□ -1.58
CDH12P55289 PSMA2P2-201ENST00000504319 686 ntBASIC5.16□□□□□ -1.58
CDH12P55289 AC021193.1-201ENST00000511607 420 ntBASIC5.16□□□□□ -1.58
CDH12P55289 AC133963.2-201ENST00000513686 578 ntBASIC5.16□□□□□ -1.58
CDH12P55289 AC012625.1-201ENST00000515153 625 ntTSL 5 BASIC5.16□□□□□ -1.58
CDH12P55289 Y_RNA.717-201ENST00000517106 92 ntBASIC5.16□□□□□ -1.58
CDH12P55289 LINC01609-201ENST00000519506 424 ntTSL 3 BASIC5.16□□□□□ -1.58
CDH12P55289 AP000873.2-207ENST00000529607 452 ntTSL 3 BASIC5.16□□□□□ -1.58
CDH12P55289 AP000648.1-201ENST00000529682 397 ntBASIC5.16□□□□□ -1.58
CDH12P55289 AP000916.1-201ENST00000533869 835 ntBASIC5.16□□□□□ -1.58
CDH12P55289 TMEM126B-211ENST00000534341 1273 ntTSL 2 BASIC5.16□□□□□ -1.58
CDH12P55289 GPRC5D-AS1-205ENST00000540198 404 ntTSL 5 BASIC5.16□□□□□ -1.58
CDH12P55289 AC069208.1-201ENST00000540811 676 ntTSL 4 BASIC5.16□□□□□ -1.58
CDH12P55289 AC007406.1-201ENST00000544067 315 ntTSL 3 BASIC5.16□□□□□ -1.58
CDH12P55289 RAD51AP1-213ENST00000544927 787 ntTSL 4 BASIC5.16□□□□□ -1.58
CDH12P55289 LINC02448-201ENST00000548613 583 ntTSL 2 BASIC5.16□□□□□ -1.58
CDH12P55289 AC055874.1-201ENST00000561458 479 ntTSL 2 BASIC5.16□□□□□ -1.58
CDH12P55289 AC092134.1-201ENST00000563690 800 ntTSL 3 BASIC5.16□□□□□ -1.58
CDH12P55289 AGGF1P5-201ENST00000567900 919 ntBASIC5.16□□□□□ -1.58
CDH12P55289 AC087500.2-201ENST00000575056 498 ntTSL 5 BASIC5.16□□□□□ -1.58
CDH12P55289 AC124283.4-201ENST00000581815 456 ntBASIC5.16□□□□□ -1.58
CDH12P55289 ZNF418-210ENST00000600989 597 ntTSL 5 BASIC5.16□□□□□ -1.58
CDH12P55289 RMDN2-AS1-203ENST00000601029 613 ntTSL 5 BASIC5.16□□□□□ -1.58
CDH12P55289 AL606834.3-201ENST00000602615 496 ntBASIC5.16□□□□□ -1.58
CDH12P55289 AL357094.1-201ENST00000603845 844 ntBASIC5.16□□□□□ -1.58
CDH12P55289 AC068313.1-201ENST00000604028 1008 ntBASIC5.16□□□□□ -1.58
CDH12P55289 AL031601.1-201ENST00000605702 394 ntBASIC5.16□□□□□ -1.58
Retrieved 100 of 98,524 protein–RNA pairs in 75.7 ms