Protein–RNA interactions for Protein: P52948

NUP98, Nuclear pore complex protein Nup98-Nup96, humanhuman

Predictions only

Length 1,817 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NUP98P52948 LRRC37BP1-201ENST00000398851 714 ntBASIC6.15□□□□□ -1.43
NUP98P52948 RPS3AP23-201ENST00000401762 784 ntBASIC6.15□□□□□ -1.43
NUP98P52948 CACYBP-203ENST00000406752 243 ntTSL 5 BASIC6.15□□□□□ -1.43
NUP98P52948 AC004690.1-201ENST00000418216 328 ntBASIC6.15□□□□□ -1.43
NUP98P52948 AC012512.1-201ENST00000446594 718 ntBASIC6.15□□□□□ -1.43
NUP98P52948 AC068707.1-201ENST00000451438 391 ntTSL 3 BASIC6.15□□□□□ -1.43
NUP98P52948 AC009139.2-201ENST00000569032 566 ntTSL 5 BASIC6.15□□□□□ -1.43
NUP98P52948 AC068831.8-201ENST00000620171 435 ntBASIC6.15□□□□□ -1.43
NUP98P52948 BAALC-AS1-201ENST00000499522 1353 ntTSL 5 BASIC6.15□□□□□ -1.43
NUP98P52948 RFFL-202ENST00000394597 4227 ntAPPRIS P1 TSL 1 (best) BASIC6.15□□□□□ -1.43
NUP98P52948 GABRA1-215ENST00000636573 2262 ntAPPRIS P1 TSL 5 BASIC6.15□□□□□ -1.43
NUP98P52948 SLC15A2-201ENST00000295605 2379 ntTSL 2 BASIC6.15□□□□□ -1.43
NUP98P52948 MTRR-202ENST00000440940 3215 ntAPPRIS P1 TSL 1 (best) BASIC6.15□□□□□ -1.43
NUP98P52948 ZNF836-204ENST00000597252 3209 ntAPPRIS P2 TSL 2 BASIC6.15□□□□□ -1.43
NUP98P52948 AC007382.1-201ENST00000624376 2618 ntBASIC6.15□□□□□ -1.43
NUP98P52948 RNF14-204ENST00000394519 4173 ntAPPRIS P1 TSL 1 (best) BASIC6.14□□□□□ -1.43
NUP98P52948 MECOM-203ENST00000460814 3374 ntTSL 1 (best) BASIC6.14□□□□□ -1.43
NUP98P52948 BCLAF1-201ENST00000353331 7110 ntTSL 5 BASIC6.14□□□□□ -1.43
NUP98P52948 ENPP3-203ENST00000414305 3418 ntAPPRIS P1 TSL 1 (best) BASIC6.14□□□□□ -1.43
NUP98P52948 AC018557.1-201ENST00000569274 1790 ntTSL 5 BASIC6.14□□□□□ -1.43
NUP98P52948 ZNF559-201ENST00000317221 2732 ntTSL 2 BASIC6.14□□□□□ -1.43
NUP98P52948 SBNO1-201ENST00000267176 11121 ntAPPRIS P3 TSL 5 BASIC6.14□□□□□ -1.43
NUP98P52948 TRBV21OR9-2-201ENST00000331828 367 ntAPPRIS P1 BASIC6.14□□□□□ -1.43
NUP98P52948 IGLV5-48-201ENST00000390293 369 ntAPPRIS P1 BASIC6.14□□□□□ -1.43
NUP98P52948 CCL7-203ENST00000394630 687 ntTSL 1 (best) BASIC6.14□□□□□ -1.43
NUP98P52948 AC009480.2-201ENST00000422916 432 ntBASIC6.14□□□□□ -1.43
NUP98P52948 C4BPAP2-201ENST00000428434 478 ntBASIC6.14□□□□□ -1.43
NUP98P52948 AL450472.1-201ENST00000439434 405 ntTSL 2 BASIC6.14□□□□□ -1.43
NUP98P52948 AC068492.1-201ENST00000448672 469 ntTSL 3 BASIC6.14□□□□□ -1.43
NUP98P52948 RPS5P7-201ENST00000456664 608 ntBASIC6.14□□□□□ -1.43
NUP98P52948 AP001011.1-202ENST00000581172 667 ntTSL 3 BASIC6.14□□□□□ -1.43
NUP98P52948 AC079298.3-201ENST00000624941 977 ntTSL 3 BASIC6.14□□□□□ -1.43
NUP98P52948 AC005972.4-201ENST00000636248 1131 ntTSL 5 BASIC6.14□□□□□ -1.43
NUP98P52948 OR2M2-202ENST00000641211 1229 ntAPPRIS P1 BASIC6.14□□□□□ -1.43
NUP98P52948 OR2M2-203ENST00000641836 1151 ntAPPRIS P1 BASIC6.14□□□□□ -1.43
NUP98P52948 THOC2-220ENST00000618150 3211 ntTSL 1 (best) BASIC6.14□□□□□ -1.43
NUP98P52948 DNAL1-202ENST00000553645 8404 ntAPPRIS P1 TSL 1 (best) BASIC6.14□□□□□ -1.43
NUP98P52948 ZCCHC6-201ENST00000277141 5724 ntTSL 2 BASIC6.14□□□□□ -1.43
NUP98P52948 ESRRG-204ENST00000361525 5363 ntAPPRIS P1 TSL 5 BASIC6.14□□□□□ -1.43
NUP98P52948 LIMA1-212ENST00000552491 2652 ntAPPRIS ALT2 TSL 2 BASIC6.14□□□□□ -1.43
NUP98P52948 GJC1-207ENST00000590758 7566 ntAPPRIS P1 TSL 3 BASIC6.14□□□□□ -1.43
NUP98P52948 PCDH11X-202ENST00000361655 4126 ntAPPRIS ALT2 TSL 1 (best) BASIC6.13□□□□□ -1.43
NUP98P52948 RNU1-82P-201ENST00000390851 165 ntBASIC6.13□□□□□ -1.43
NUP98P52948 AC104462.2-201ENST00000418402 271 ntTSL 3 BASIC6.13□□□□□ -1.43
NUP98P52948 CHIAP3-201ENST00000423668 1133 ntBASIC6.13□□□□□ -1.43
NUP98P52948 HNRNPA1P29-201ENST00000426409 879 ntBASIC6.13□□□□□ -1.43
NUP98P52948 CNOT7P1-201ENST00000429006 852 ntBASIC6.13□□□□□ -1.43
NUP98P52948 ZBTB40-IT1-201ENST00000438551 273 ntTSL 3 BASIC6.13□□□□□ -1.43
NUP98P52948 AC025164.1-201ENST00000496249 478 ntBASIC6.13□□□□□ -1.43
NUP98P52948 AL132780.1-201ENST00000548819 556 ntTSL 4 BASIC6.13□□□□□ -1.43
NUP98P52948 AL161757.4-204ENST00000557136 834 ntTSL 3 BASIC6.13□□□□□ -1.43
NUP98P52948 AC019193.2-201ENST00000610012 634 ntBASIC6.13□□□□□ -1.43
NUP98P52948 AC087633.2-201ENST00000618611 725 ntTSL 3 BASIC6.13□□□□□ -1.43
NUP98P52948 AC105105.5-201ENST00000622635 1294 ntBASIC6.13□□□□□ -1.43
NUP98P52948 MS4A1-207ENST00000532073 2560 ntTSL 1 (best) BASIC6.13□□□□□ -1.43
NUP98P52948 DCC-203ENST00000442544 10206 ntAPPRIS P1 TSL 1 (best) BASIC6.13□□□□□ -1.43
NUP98P52948 LINC00550-201ENST00000629293 3434 ntTSL 1 (best) BASIC6.13□□□□□ -1.43
NUP98P52948 AL137058.3-201ENST00000624531 3099 ntBASIC6.13□□□□□ -1.43
NUP98P52948 RBMS1-202ENST00000392753 3781 ntTSL 5 BASIC6.13□□□□□ -1.43
NUP98P52948 MGAM2-201ENST00000477922 7867 ntAPPRIS P1 TSL 5 BASIC6.13□□□□□ -1.43
NUP98P52948 GALNT5-201ENST00000259056 6171 ntAPPRIS P1 TSL 1 (best) BASIC6.13□□□□□ -1.43
NUP98P52948 PBRM1-202ENST00000337303 4825 ntAPPRIS ALT1 TSL 1 (best) BASIC6.13□□□□□ -1.43
NUP98P52948 ITGA1-201ENST00000282588 10757 ntAPPRIS P1 TSL 1 (best) BASIC6.13□□□□□ -1.43
NUP98P52948 OGT-202ENST00000373719 5461 ntAPPRIS P3 TSL 1 (best) BASIC6.13□□□□□ -1.43
NUP98P52948 DCTN4-201ENST00000424236 4054 ntTSL 2 BASIC6.13□□□□□ -1.43
NUP98P52948 SYT14-206ENST00000537238 5208 ntAPPRIS ALT2 TSL 5 BASIC6.13□□□□□ -1.43
NUP98P52948 TRAV26-2-201ENST00000390460 327 ntAPPRIS P1 BASIC6.13□□□□□ -1.43
NUP98P52948 AL603962.1-201ENST00000413148 436 ntTSL 5 BASIC6.13□□□□□ -1.43
NUP98P52948 ATG4AP1-201ENST00000416893 538 ntBASIC6.13□□□□□ -1.43
NUP98P52948 AL354868.1-201ENST00000417077 482 ntBASIC6.13□□□□□ -1.43
NUP98P52948 AC016831.4-201ENST00000438302 307 ntBASIC6.13□□□□□ -1.43
NUP98P52948 AL034380.1-201ENST00000448791 306 ntTSL 3 BASIC6.13□□□□□ -1.43
NUP98P52948 AC091180.1-201ENST00000462104 372 ntBASIC6.13□□□□□ -1.43
NUP98P52948 RN7SL385P-201ENST00000468873 276 ntBASIC6.13□□□□□ -1.43
NUP98P52948 STRADBP1-201ENST00000478954 1281 ntBASIC6.13□□□□□ -1.43
NUP98P52948 AC026979.1-201ENST00000492525 396 ntBASIC6.13□□□□□ -1.43
NUP98P52948 AC087855.1-201ENST00000518178 430 ntTSL 3 BASIC6.13□□□□□ -1.43
NUP98P52948 OR5M11-201ENST00000528616 1020 ntAPPRIS P1 BASIC6.13□□□□□ -1.43
NUP98P52948 LINC02327-203ENST00000550122 738 ntTSL 2 BASIC6.13□□□□□ -1.43
NUP98P52948 NOVA1-AS1-203ENST00000552101 468 ntTSL 3 BASIC6.13□□□□□ -1.43
NUP98P52948 AL139354.1-201ENST00000554319 645 ntTSL 5 BASIC6.13□□□□□ -1.43
NUP98P52948 TVP23CP2-201ENST00000571473 623 ntBASIC6.13□□□□□ -1.43
NUP98P52948 AC091932.2-201ENST00000623014 291 ntBASIC6.13□□□□□ -1.43
NUP98P52948 ZNF26-202ENST00000534834 4853 ntAPPRIS ALT2 TSL 2 BASIC6.13□□□□□ -1.43
NUP98P52948 PCDH15-215ENST00000409834 5401 ntTSL 5 BASIC6.13□□□□□ -1.43
NUP98P52948 CLVS1-205ENST00000519846 3622 ntAPPRIS P1 TSL 5 BASIC6.13□□□□□ -1.43
NUP98P52948 AL031123.3-201ENST00000623345 1837 ntBASIC6.13□□□□□ -1.43
NUP98P52948 AC139713.2-214ENST00000642059 1811 ntBASIC6.13□□□□□ -1.43
NUP98P52948 PALMD-201ENST00000263174 2510 ntAPPRIS P1 TSL 1 (best) BASIC6.12□□□□□ -1.43
NUP98P52948 FSTL5-201ENST00000306100 4831 ntAPPRIS P3 TSL 1 (best) BASIC6.12□□□□□ -1.43
NUP98P52948 AL355306.2-205ENST00000635395 1646 ntTSL 5 BASIC6.12□□□□□ -1.43
NUP98P52948 MPDZ-202ENST00000319217 7722 ntAPPRIS ALT2 TSL 5 BASIC6.12□□□□□ -1.43
NUP98P52948 DSPP-202ENST00000399271 4331 ntAPPRIS P1 TSL 5 BASIC6.12□□□□□ -1.43
NUP98P52948 CNOT1-216ENST00000569240 7660 ntAPPRIS ALT1 TSL 1 (best) BASIC6.12□□□□□ -1.43
NUP98P52948 ALB-202ENST00000401494 1659 ntTSL 5 BASIC6.12□□□□□ -1.43
NUP98P52948 BDNF-210ENST00000438929 4059 ntTSL 1 (best) BASIC6.12□□□□□ -1.43
NUP98P52948 HUWE1-203ENST00000342160 14796 ntAPPRIS P1 TSL 5 BASIC6.12□□□□□ -1.43
NUP98P52948 SNORD113.2-201ENST00000364166 89 ntBASIC6.12□□□□□ -1.43
NUP98P52948 RPL21P67-201ENST00000402896 478 ntBASIC6.12□□□□□ -1.43
NUP98P52948 AC097523.2-201ENST00000435551 652 ntBASIC6.12□□□□□ -1.43
Retrieved 100 of 98,524 protein–RNA pairs in 100.3 ms