Protein–RNA interactions for Protein: P52945

PDX1, Pancreas/duodenum homeobox protein 1, humanhuman

Predictions only

Length 283 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDX1P52945 GCSAML-201ENST00000366488 3820 ntAPPRIS P3 TSL 1 (best) BASIC5.22□□□□□ -1.57
PDX1P52945 TRAV10-201ENST00000390432 379 ntAPPRIS P1 BASIC5.22□□□□□ -1.57
PDX1P52945 SNORA40.4-201ENST00000390971 128 ntBASIC5.22□□□□□ -1.57
PDX1P52945 AC003035.1-201ENST00000391359 544 ntTSL 3 BASIC5.22□□□□□ -1.57
PDX1P52945 MIR3681HG-202ENST00000412606 578 ntTSL 5 BASIC5.22□□□□□ -1.57
PDX1P52945 RPSAP35-201ENST00000413753 818 ntBASIC5.22□□□□□ -1.57
PDX1P52945 AL357078.2-201ENST00000416486 427 ntBASIC5.22□□□□□ -1.57
PDX1P52945 KCNMA1-AS3-201ENST00000418515 701 ntTSL 3 BASIC5.22□□□□□ -1.57
PDX1P52945 RNF10P1-201ENST00000418589 369 ntBASIC5.22□□□□□ -1.57
PDX1P52945 AC017019.1-201ENST00000426129 261 ntBASIC5.22□□□□□ -1.57
PDX1P52945 AL390879.2-203ENST00000426943 1121 ntBASIC5.22□□□□□ -1.57
PDX1P52945 ATP13A4-AS1-202ENST00000431512 394 ntTSL 3 BASIC5.22□□□□□ -1.57
PDX1P52945 AL136987.1-201ENST00000434300 396 ntTSL 5 BASIC5.22□□□□□ -1.57
PDX1P52945 GSTM5P1-201ENST00000434751 660 ntBASIC5.22□□□□□ -1.57
PDX1P52945 PA2G4P6-201ENST00000438325 1197 ntBASIC5.22□□□□□ -1.57
PDX1P52945 LINC00969-211ENST00000438608 525 ntTSL 5 BASIC5.22□□□□□ -1.57
PDX1P52945 NANOGP9-201ENST00000439890 892 ntBASIC5.22□□□□□ -1.57
PDX1P52945 AC020559.1-201ENST00000444229 583 ntTSL 2 BASIC5.22□□□□□ -1.57
PDX1P52945 AC090114.3-201ENST00000479267 829 ntBASIC5.22□□□□□ -1.57
PDX1P52945 AC109462.1-201ENST00000491087 368 ntBASIC5.22□□□□□ -1.57
PDX1P52945 AK4P6-201ENST00000505168 528 ntBASIC5.22□□□□□ -1.57
PDX1P52945 AC010395.1-201ENST00000507627 697 ntTSL 5 BASIC5.22□□□□□ -1.57
PDX1P52945 AC079858.1-201ENST00000507842 448 ntTSL 3 BASIC5.22□□□□□ -1.57
PDX1P52945 HMGB1P44-201ENST00000508597 572 ntBASIC5.22□□□□□ -1.57
PDX1P52945 RFPL4AP3-201ENST00000515267 345 ntBASIC5.22□□□□□ -1.57
PDX1P52945 PMS2P3-207ENST00000529061 717 ntBASIC5.22□□□□□ -1.57
PDX1P52945 AC079907.2-202ENST00000547004 423 ntTSL 2 BASIC5.22□□□□□ -1.57
PDX1P52945 AC074029.2-201ENST00000551045 634 ntBASIC5.22□□□□□ -1.57
PDX1P52945 AC107032.2-201ENST00000551082 386 ntTSL 3 BASIC5.22□□□□□ -1.57
PDX1P52945 AC015845.1-202ENST00000580184 242 ntTSL 3 BASIC5.22□□□□□ -1.57
PDX1P52945 VDAC1P8-204ENST00000589489 997 ntTSL 5 BASIC5.22□□□□□ -1.57
PDX1P52945 SMIM24-204ENST00000591708 660 ntAPPRIS ALT2 TSL 2 BASIC5.22□□□□□ -1.57
PDX1P52945 IGLCOR22-2-201ENST00000605398 313 ntBASIC5.22□□□□□ -1.57
PDX1P52945 AC067838.1-201ENST00000606064 577 ntBASIC5.22□□□□□ -1.57
PDX1P52945 AC073342.3-201ENST00000624211 193 ntBASIC5.22□□□□□ -1.57
PDX1P52945 AC103798.2-201ENST00000624292 632 ntBASIC5.22□□□□□ -1.57
PDX1P52945 ZNF568-214ENST00000616085 3542 ntTSL 5 BASIC5.22□□□□□ -1.57
PDX1P52945 HSPA8P18-201ENST00000439846 1928 ntBASIC5.22□□□□□ -1.57
PDX1P52945 AC005005.4-201ENST00000623789 16698 ntBASIC5.22□□□□□ -1.57
PDX1P52945 SOX2-OT-218ENST00000498731 3576 ntTSL 1 (best) BASIC5.22□□□□□ -1.57
PDX1P52945 ATRX-202ENST00000395603 10218 ntAPPRIS ALT2 TSL 1 (best) BASIC5.22□□□□□ -1.57
PDX1P52945 OR2A7-202ENST00000641841 2062 ntAPPRIS P1 BASIC5.22□□□□□ -1.57
PDX1P52945 ZFP14-201ENST00000270001 7489 ntAPPRIS P1 TSL 1 (best) BASIC5.22□□□□□ -1.57
PDX1P52945 CA1-225ENST00000626824 2405 ntTSL 5 BASIC5.22□□□□□ -1.57
PDX1P52945 SLC12A1-201ENST00000330289 1764 ntTSL 1 (best) BASIC5.21□□□□□ -1.57
PDX1P52945 SDHC-202ENST00000367975 13566 ntAPPRIS P1 TSL 1 (best) BASIC5.21□□□□□ -1.57
PDX1P52945 OR10AB1P-202ENST00000641219 1686 ntBASIC5.21□□□□□ -1.57
PDX1P52945 AC018809.2-201ENST00000602436 3823 ntBASIC5.21□□□□□ -1.57
PDX1P52945 GPR18-202ENST00000397470 1468 ntAPPRIS P1 TSL 1 (best) BASIC5.21□□□□□ -1.58
PDX1P52945 AL132656.2-201ENST00000482985 1837 ntTSL 5 BASIC5.21□□□□□ -1.58
PDX1P52945 MELK-210ENST00000543751 2400 ntTSL 1 (best) BASIC5.21□□□□□ -1.58
PDX1P52945 AMZ2P2-201ENST00000406819 1057 ntBASIC5.21□□□□□ -1.58
PDX1P52945 SEPT7P8-201ENST00000413308 775 ntBASIC5.21□□□□□ -1.58
PDX1P52945 AC109779.1-201ENST00000414475 573 ntTSL 5 BASIC5.21□□□□□ -1.58
PDX1P52945 AC008060.2-201ENST00000415333 468 ntTSL 3 BASIC5.21□□□□□ -1.58
PDX1P52945 AL158827.1-201ENST00000416300 391 ntBASIC5.21□□□□□ -1.58
PDX1P52945 LINC01821-201ENST00000419786 1084 ntTSL 1 (best) BASIC5.21□□□□□ -1.58
PDX1P52945 FABP7P2-201ENST00000429946 379 ntBASIC5.21□□□□□ -1.58
PDX1P52945 AL513323.1-201ENST00000431862 1063 ntTSL 1 (best) BASIC5.21□□□□□ -1.58
PDX1P52945 AL161457.1-201ENST00000434656 905 ntTSL 5 BASIC5.21□□□□□ -1.58
PDX1P52945 MTUS2-AS2-202ENST00000434779 720 ntTSL 3 BASIC5.21□□□□□ -1.58
PDX1P52945 SLC8A1-AS1-205ENST00000435515 497 ntTSL 3 BASIC5.21□□□□□ -1.58
PDX1P52945 HIGD1AP8-201ENST00000453927 274 ntBASIC5.21□□□□□ -1.58
PDX1P52945 AC108161.1-201ENST00000461060 402 ntBASIC5.21□□□□□ -1.58
PDX1P52945 MTND6P2-201ENST00000512226 524 ntBASIC5.21□□□□□ -1.58
PDX1P52945 OR8K2P-201ENST00000524645 927 ntBASIC5.21□□□□□ -1.58
PDX1P52945 AP001001.1-202ENST00000527594 692 ntTSL 3 BASIC5.21□□□□□ -1.58
PDX1P52945 AC122688.1-201ENST00000541494 223 ntBASIC5.21□□□□□ -1.58
PDX1P52945 AC008147.3-201ENST00000548666 354 ntBASIC5.21□□□□□ -1.58
PDX1P52945 AC087636.1-201ENST00000554787 573 ntTSL 4 BASIC5.21□□□□□ -1.58
PDX1P52945 AC025271.2-201ENST00000566990 800 ntTSL 3 BASIC5.21□□□□□ -1.58
PDX1P52945 AC087501.4-201ENST00000574460 235 ntTSL 5 BASIC5.21□□□□□ -1.58
PDX1P52945 AC011840.5-201ENST00000582125 771 ntBASIC5.21□□□□□ -1.58
PDX1P52945 ZNF227-204ENST00000586228 569 ntTSL 2 BASIC5.21□□□□□ -1.58
PDX1P52945 AC006504.5-201ENST00000588122 655 ntTSL 5 BASIC5.21□□□□□ -1.58
PDX1P52945 AL136370.1-201ENST00000608166 691 ntBASIC5.21□□□□□ -1.58
PDX1P52945 AC092574.1-201ENST00000609771 420 ntBASIC5.21□□□□□ -1.58
PDX1P52945 PXT1-202ENST00000619547 619 ntAPPRIS ALT2 TSL 1 (best) BASIC5.21□□□□□ -1.58
PDX1P52945 AL445528.2-201ENST00000620582 470 ntBASIC5.21□□□□□ -1.58
PDX1P52945 CCL14-204ENST00000622526 472 ntTSL 3 BASIC5.21□□□□□ -1.58
PDX1P52945 LAMTOR5-AS1-244ENST00000629484 780 ntTSL 5 BASIC5.21□□□□□ -1.58
PDX1P52945 ZNF83-203ENST00000541777 3743 ntAPPRIS P1 TSL 1 (best) BASIC5.21□□□□□ -1.58
PDX1P52945 AC007750.1-202ENST00000418968 4098 ntTSL 5 BASIC5.21□□□□□ -1.58
PDX1P52945 AL358975.1-203ENST00000413352 2932 ntTSL 3 BASIC5.21□□□□□ -1.58
PDX1P52945 ADGRG2-203ENST00000356606 4630 ntTSL 1 (best) BASIC5.21□□□□□ -1.58
PDX1P52945 POLR2B-213ENST00000639658 3300 ntTSL 5 BASIC5.21□□□□□ -1.58
PDX1P52945 ZBTB8A-202ENST00000373510 7075 ntAPPRIS P1 TSL 1 (best) BASIC5.21□□□□□ -1.58
PDX1P52945 PSMD6-202ENST00000394431 1349 ntTSL 1 (best) BASIC5.21□□□□□ -1.58
PDX1P52945 PNPLA4-203ENST00000444736 2752 ntAPPRIS P1 TSL 4 BASIC5.21□□□□□ -1.58
PDX1P52945 AC024341.1-201ENST00000526444 1552 ntBASIC5.21□□□□□ -1.58
PDX1P52945 SLC28A3-201ENST00000376238 4887 ntAPPRIS P1 TSL 1 (best) BASIC5.2□□□□□ -1.58
PDX1P52945 PHC3-217ENST00000497658 2087 ntTSL 1 (best) BASIC5.2□□□□□ -1.58
PDX1P52945 GART-205ENST00000381839 3469 ntAPPRIS P1 TSL 1 (best) BASIC5.2□□□□□ -1.58
PDX1P52945 SAMSN1-203ENST00000400566 1888 ntAPPRIS P1 TSL 1 (best) BASIC5.2□□□□□ -1.58
PDX1P52945 AC114947.2-201ENST00000565748 2125 ntBASIC5.2□□□□□ -1.58
PDX1P52945 UGT2A1-205ENST00000512704 2519 ntTSL 1 (best) BASIC5.2□□□□□ -1.58
PDX1P52945 RPGRIP1-201ENST00000382933 2004 ntTSL 1 (best) BASIC5.2□□□□□ -1.58
PDX1P52945 CASC19-260ENST00000641828 2001 ntBASIC5.2□□□□□ -1.58
PDX1P52945 NELL2-205ENST00000452445 3196 ntAPPRIS P1 TSL 1 (best) BASIC5.2□□□□□ -1.58
PDX1P52945 MRRF-207ENST00000373729 870 ntTSL 3 BASIC5.2□□□□□ -1.58
Retrieved 100 of 98,524 protein–RNA pairs in 175 ms