Protein–RNA interactions for Protein: P51654

GPC3, Glypican-3, humanhuman

Predictions only

Length 580 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GPC3P51654 SSMEM1-201ENST00000297819 1159 ntAPPRIS P1 TSL 1 (best) BASIC5.81□□□□□ -1.48
GPC3P51654 U3.3-201ENST00000362986 216 ntBASIC5.81□□□□□ -1.48
GPC3P51654 SPRR2E-202ENST00000368751 692 ntAPPRIS P1 TSL 1 (best) BASIC5.81□□□□□ -1.48
GPC3P51654 F9-202ENST00000394090 1272 ntTSL 1 (best) BASIC5.81□□□□□ -1.48
GPC3P51654 DNAJA1P4-201ENST00000406473 1166 ntBASIC5.81□□□□□ -1.48
GPC3P51654 PRR21-201ENST00000408934 1170 ntAPPRIS P1 BASIC5.81□□□□□ -1.48
GPC3P51654 RN7SKP125-201ENST00000410481 302 ntBASIC5.81□□□□□ -1.48
GPC3P51654 RPL7AP49-201ENST00000429522 581 ntBASIC5.81□□□□□ -1.48
GPC3P51654 SPATA13-AS1-201ENST00000430733 433 ntTSL 3 BASIC5.81□□□□□ -1.48
GPC3P51654 LINC00894-203ENST00000432696 298 ntTSL 1 (best) BASIC5.81□□□□□ -1.48
GPC3P51654 AL591438.1-201ENST00000433508 581 ntBASIC5.81□□□□□ -1.48
GPC3P51654 AF127577.2-201ENST00000436429 824 ntTSL 3 BASIC5.81□□□□□ -1.48
GPC3P51654 AC090804.1-201ENST00000448870 490 ntBASIC5.81□□□□□ -1.48
GPC3P51654 AL137005.1-201ENST00000452944 719 ntTSL 5 BASIC5.81□□□□□ -1.48
GPC3P51654 AC011287.2-201ENST00000456809 842 ntTSL 5 BASIC5.81□□□□□ -1.48
GPC3P51654 AC079168.1-201ENST00000458741 345 ntBASIC5.81□□□□□ -1.48
GPC3P51654 LRRC77P-202ENST00000463642 457 ntTSL 4 BASIC5.81□□□□□ -1.48
GPC3P51654 MORF4L2P1-201ENST00000503761 858 ntBASIC5.81□□□□□ -1.48
GPC3P51654 GTF2F2P1-201ENST00000511083 675 ntBASIC5.81□□□□□ -1.48
GPC3P51654 E2F5-204ENST00000517476 1094 ntTSL 2 BASIC5.81□□□□□ -1.48
GPC3P51654 FTH1P11-201ENST00000517577 551 ntBASIC5.81□□□□□ -1.48
GPC3P51654 AC012613.1-201ENST00000522685 387 ntTSL 2 BASIC5.81□□□□□ -1.48
GPC3P51654 LINC02446-201ENST00000544591 868 ntTSL 2 BASIC5.81□□□□□ -1.48
GPC3P51654 GPATCH2L-203ENST00000553588 776 ntTSL 2 BASIC5.81□□□□□ -1.48
GPC3P51654 AL109935.2-201ENST00000587737 395 ntTSL 5 BASIC5.81□□□□□ -1.48
GPC3P51654 AC016747.2-201ENST00000605902 364 ntTSL 2 BASIC5.81□□□□□ -1.48
GPC3P51654 AC133644.2-201ENST00000608142 540 ntBASIC5.81□□□□□ -1.48
GPC3P51654 SHMT1-211ENST00000618902 378 ntTSL 5 BASIC5.81□□□□□ -1.48
GPC3P51654 AC020763.5-201ENST00000623298 430 ntBASIC5.81□□□□□ -1.48
GPC3P51654 ZNF81-202ENST00000338637 7859 ntAPPRIS P1 TSL 3 BASIC5.81□□□□□ -1.48
GPC3P51654 PEX2-201ENST00000357039 4317 ntAPPRIS P1 TSL 1 (best) BASIC5.81□□□□□ -1.48
GPC3P51654 ZNF33A-202ENST00000374618 6122 ntTSL 4 BASIC5.81□□□□□ -1.48
GPC3P51654 EXPH5-201ENST00000265843 10187 ntAPPRIS P3 TSL 1 (best) BASIC5.81□□□□□ -1.48
GPC3P51654 CEP295-206ENST00000531700 2890 ntAPPRIS ALT2 TSL 2 BASIC5.81□□□□□ -1.48
GPC3P51654 DTNA-231ENST00000598774 2418 ntTSL 1 (best) BASIC5.8□□□□□ -1.48
GPC3P51654 MTERF1-201ENST00000351870 1997 ntAPPRIS P3 TSL 1 (best) BASIC5.8□□□□□ -1.48
GPC3P51654 IL7R-201ENST00000303115 4626 ntAPPRIS P1 TSL 1 (best) BASIC5.8□□□□□ -1.48
GPC3P51654 OR8D4-201ENST00000321355 1331 ntAPPRIS P1 BASIC5.8□□□□□ -1.48
GPC3P51654 AC053481.2-202ENST00000582394 1500 ntBASIC5.8□□□□□ -1.48
GPC3P51654 OR10A3-202ENST00000642047 2650 ntAPPRIS P1 BASIC5.8□□□□□ -1.48
GPC3P51654 RNASE9-201ENST00000338904 1049 ntAPPRIS P3 TSL 1 (best) BASIC5.8□□□□□ -1.48
GPC3P51654 AL353740.1-201ENST00000366253 575 ntTSL 2 BASIC5.8□□□□□ -1.48
GPC3P51654 GAPDHP15-201ENST00000398586 975 ntBASIC5.8□□□□□ -1.48
GPC3P51654 AC092111.3-201ENST00000402465 496 ntAPPRIS P1 TSL 2 BASIC5.8□□□□□ -1.48
GPC3P51654 AL589647.1-201ENST00000402485 466 ntBASIC5.8□□□□□ -1.48
GPC3P51654 NUDT19P3-201ENST00000404698 555 ntBASIC5.8□□□□□ -1.48
GPC3P51654 EI24P4-201ENST00000423683 1078 ntBASIC5.8□□□□□ -1.48
GPC3P51654 AC106901.1-201ENST00000425086 698 ntBASIC5.8□□□□□ -1.48
GPC3P51654 AL138787.1-202ENST00000437804 898 ntBASIC5.8□□□□□ -1.48
GPC3P51654 AC092647.2-201ENST00000452998 253 ntBASIC5.8□□□□□ -1.48
GPC3P51654 SH3GLB1-202ENST00000482504 1199 ntTSL 1 (best) BASIC5.8□□□□□ -1.48
GPC3P51654 RN7SL97P-201ENST00000486780 299 ntBASIC5.8□□□□□ -1.48
GPC3P51654 ZBED3-AS1-209ENST00000512213 681 ntTSL 3 BASIC5.8□□□□□ -1.48
GPC3P51654 AC110775.1-201ENST00000513721 462 ntBASIC5.8□□□□□ -1.48
GPC3P51654 EIF3KP3-201ENST00000514461 639 ntBASIC5.8□□□□□ -1.48
GPC3P51654 RN7SKP66-201ENST00000516681 231 ntBASIC5.8□□□□□ -1.48
GPC3P51654 AC013701.1-201ENST00000522657 465 ntBASIC5.8□□□□□ -1.48
GPC3P51654 AC092490.3-201ENST00000545370 572 ntBASIC5.8□□□□□ -1.48
GPC3P51654 RNASE9-204ENST00000553541 1136 ntAPPRIS P3 TSL 1 (best) BASIC5.8□□□□□ -1.48
GPC3P51654 RNASE9-206ENST00000554964 1101 ntAPPRIS P3 TSL 1 (best) BASIC5.8□□□□□ -1.48
GPC3P51654 RNASE9-208ENST00000556208 1212 ntAPPRIS ALT2 TSL 1 (best) BASIC5.8□□□□□ -1.48
GPC3P51654 RNASE9-210ENST00000557209 1137 ntAPPRIS ALT2 TSL 1 (best) BASIC5.8□□□□□ -1.48
GPC3P51654 AC087477.4-201ENST00000560586 542 ntTSL 4 BASIC5.8□□□□□ -1.48
GPC3P51654 AC040173.1-201ENST00000572479 580 ntTSL 4 BASIC5.8□□□□□ -1.48
GPC3P51654 AL159169.2-201ENST00000610061 1269 ntBASIC5.8□□□□□ -1.48
GPC3P51654 AC074140.1-201ENST00000621617 208 ntBASIC5.8□□□□□ -1.48
GPC3P51654 MTCO1P1-201ENST00000624263 1081 ntBASIC5.8□□□□□ -1.48
GPC3P51654 SLC16A9-201ENST00000395347 3646 ntAPPRIS P1 TSL 2 BASIC5.8□□□□□ -1.48
GPC3P51654 ERBIN-208ENST00000506030 4386 ntTSL 1 (best) BASIC5.8□□□□□ -1.48
GPC3P51654 VPS41-203ENST00000395969 3181 ntTSL 5 BASIC5.8□□□□□ -1.48
GPC3P51654 CSMD1-215ENST00000537824 13512 ntAPPRIS ALT2 TSL 5 BASIC5.8□□□□□ -1.48
GPC3P51654 EIF3M-208ENST00000531120 5051 ntAPPRIS P1 TSL 1 (best) BASIC5.8□□□□□ -1.48
GPC3P51654 LINC02355-201ENST00000503100 2520 ntTSL 1 (best) BASIC5.8□□□□□ -1.48
GPC3P51654 EDA2R-203ENST00000396050 3429 ntAPPRIS ALT2 TSL 5 BASIC5.8□□□□□ -1.48
GPC3P51654 RFC1-202ENST00000381897 4886 ntAPPRIS ALT2 TSL 1 (best) BASIC5.8□□□□□ -1.48
GPC3P51654 AP005212.5-201ENST00000577614 3505 ntTSL 5 BASIC5.79□□□□□ -1.48
GPC3P51654 OR7A5-201ENST00000322301 4216 ntAPPRIS P1 BASIC5.79□□□□□ -1.48
GPC3P51654 EPS8-209ENST00000542903 1858 ntTSL 2 BASIC5.79□□□□□ -1.48
GPC3P51654 FGF1-215ENST00000619447 3818 ntAPPRIS P1 TSL 4 BASIC5.79□□□□□ -1.48
GPC3P51654 RALGAPB-202ENST00000397040 8435 ntAPPRIS P3 TSL 1 (best) BASIC5.79□□□□□ -1.48
GPC3P51654 AC079298.1-201ENST00000625026 1619 ntBASIC5.79□□□□□ -1.48
GPC3P51654 TRPC4-205ENST00000379679 2475 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
GPC3P51654 MAX-203ENST00000341653 330 ntTSL 2 BASIC5.79□□□□□ -1.48
GPC3P51654 RNU6-729P-201ENST00000384399 107 ntBASIC5.79□□□□□ -1.48
GPC3P51654 MIR600-201ENST00000385007 98 ntBASIC5.79□□□□□ -1.48
GPC3P51654 SNORA48.4-201ENST00000391089 134 ntBASIC5.79□□□□□ -1.48
GPC3P51654 EI24P3-201ENST00000399046 1062 ntBASIC5.79□□□□□ -1.48
GPC3P51654 AL109941.1-201ENST00000401925 229 ntBASIC5.79□□□□□ -1.48
GPC3P51654 AL645733.1-201ENST00000402250 217 ntBASIC5.79□□□□□ -1.48
GPC3P51654 RNU6ATAC7P-201ENST00000408111 127 ntBASIC5.79□□□□□ -1.48
GPC3P51654 PPP3R1-203ENST00000409752 851 ntTSL 3 BASIC5.79□□□□□ -1.48
GPC3P51654 RAB9AP4-201ENST00000415230 609 ntBASIC5.79□□□□□ -1.48
GPC3P51654 AC093162.1-201ENST00000419682 124 ntBASIC5.79□□□□□ -1.48
GPC3P51654 AC002064.2-201ENST00000420245 289 ntTSL 3 BASIC5.79□□□□□ -1.48
GPC3P51654 HSPD1P12-201ENST00000429127 1069 ntBASIC5.79□□□□□ -1.48
GPC3P51654 EIF4EBP2P1-201ENST00000450009 343 ntBASIC5.79□□□□□ -1.48
GPC3P51654 AL133372.1-201ENST00000493565 745 ntBASIC5.79□□□□□ -1.48
GPC3P51654 RPS24P16-201ENST00000497294 392 ntBASIC5.79□□□□□ -1.48
GPC3P51654 AC084871.1-201ENST00000508020 628 ntTSL 3 BASIC5.79□□□□□ -1.48
GPC3P51654 AC107396.1-201ENST00000509641 735 ntTSL 5 BASIC5.79□□□□□ -1.48
Retrieved 100 of 98,524 protein–RNA pairs in 133.9 ms