Protein–RNA interactions for Protein: P43699

NKX2-1, Homeobox protein Nkx-2.1, humanhuman

Predicted RBP Predictions only

Length 371 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NKX2-1P43699 RRM1-201ENST00000300738 3076 ntAPPRIS P1 TSL 1 (best) BASIC4.57□□□□□ -1.68
NKX2-1P43699 FGF1-215ENST00000619447 3818 ntAPPRIS P1 TSL 4 BASIC4.57□□□□□ -1.68
NKX2-1P43699 DNAH6-202ENST00000389394 12795 ntAPPRIS P1 TSL 5 BASIC4.57□□□□□ -1.68
NKX2-1P43699 MAP2-202ENST00000360351 9711 ntAPPRIS P2 TSL 5 BASIC4.57□□□□□ -1.68
NKX2-1P43699 SLC12A6-216ENST00000560164 3744 ntTSL 2 BASIC4.57□□□□□ -1.68
NKX2-1P43699 GABPB1-204ENST00000396464 1401 ntTSL 1 (best) BASIC4.57□□□□□ -1.68
NKX2-1P43699 HEATR5A-203ENST00000543095 7840 ntAPPRIS P1 TSL 5 BASIC4.57□□□□□ -1.68
NKX2-1P43699 RALGAPB-202ENST00000397040 8435 ntAPPRIS P3 TSL 1 (best) BASIC4.57□□□□□ -1.68
NKX2-1P43699 AC067956.1-201ENST00000414512 2062 ntTSL 1 (best) BASIC4.57□□□□□ -1.68
NKX2-1P43699 AC010329.2-201ENST00000595195 2737 ntBASIC4.57□□□□□ -1.68
NKX2-1P43699 AC008432.1-201ENST00000615912 1320 ntBASIC4.57□□□□□ -1.68
NKX2-1P43699 FANCD2-202ENST00000383807 5102 ntAPPRIS ALT2 TSL 1 (best) BASIC4.57□□□□□ -1.68
NKX2-1P43699 RNU1-146P-201ENST00000364015 165 ntBASIC4.57□□□□□ -1.68
NKX2-1P43699 S100A9-201ENST00000368738 577 ntAPPRIS P1 TSL 1 (best) BASIC4.57□□□□□ -1.68
NKX2-1P43699 OR51A2-201ENST00000380371 942 ntAPPRIS P1 BASIC4.57□□□□□ -1.68
NKX2-1P43699 RNU6-925P-201ENST00000384629 104 ntBASIC4.57□□□□□ -1.68
NKX2-1P43699 SAMD13-206ENST00000394834 785 ntAPPRIS P1 TSL 2 BASIC4.57□□□□□ -1.68
NKX2-1P43699 AC105402.1-201ENST00000413336 545 ntBASIC4.57□□□□□ -1.68
NKX2-1P43699 AL158050.1-201ENST00000416077 457 ntBASIC4.57□□□□□ -1.68
NKX2-1P43699 BX470102.1-201ENST00000420695 531 ntTSL 2 BASIC4.57□□□□□ -1.68
NKX2-1P43699 RPL7AP51-201ENST00000422016 760 ntBASIC4.57□□□□□ -1.68
NKX2-1P43699 NLGN1-AS1-201ENST00000423873 815 ntTSL 3 BASIC4.57□□□□□ -1.68
NKX2-1P43699 TCEAL3-AS1-201ENST00000424887 361 ntTSL 5 BASIC4.57□□□□□ -1.68
NKX2-1P43699 AC113412.1-201ENST00000425840 504 ntBASIC4.57□□□□□ -1.68
NKX2-1P43699 DPY19L1P2-201ENST00000426647 915 ntBASIC4.57□□□□□ -1.68
NKX2-1P43699 RPL7P56-201ENST00000429441 717 ntBASIC4.57□□□□□ -1.68
NKX2-1P43699 HTR3E-AS1-201ENST00000431427 515 ntTSL 4 BASIC4.57□□□□□ -1.68
NKX2-1P43699 MTCYBP21-201ENST00000443300 1113 ntBASIC4.57□□□□□ -1.68
NKX2-1P43699 RPL6P5-201ENST00000445678 828 ntBASIC4.57□□□□□ -1.68
NKX2-1P43699 AP002856.1-201ENST00000447864 562 ntTSL 4 BASIC4.57□□□□□ -1.68
NKX2-1P43699 AC092685.1-201ENST00000447960 1243 ntBASIC4.57□□□□□ -1.68
NKX2-1P43699 AL158835.1-204ENST00000449693 371 ntTSL 3 BASIC4.57□□□□□ -1.68
NKX2-1P43699 GAPDHP14-201ENST00000450472 937 ntBASIC4.57□□□□□ -1.68
NKX2-1P43699 AC022431.1-201ENST00000450941 438 ntBASIC4.57□□□□□ -1.68
NKX2-1P43699 CFL1P4-201ENST00000451536 498 ntBASIC4.57□□□□□ -1.68
NKX2-1P43699 ATP5G1P3-201ENST00000463301 410 ntBASIC4.57□□□□□ -1.68
NKX2-1P43699 AC008592.2-201ENST00000506070 571 ntTSL 3 BASIC4.57□□□□□ -1.68
NKX2-1P43699 LINC00603-201ENST00000507027 733 ntTSL 5 BASIC4.57□□□□□ -1.68
NKX2-1P43699 FGB-207ENST00000509493 1164 ntTSL 5 BASIC4.57□□□□□ -1.68
NKX2-1P43699 RN7SKP157-201ENST00000516174 282 ntBASIC4.57□□□□□ -1.68
NKX2-1P43699 RN7SKP253-201ENST00000516424 309 ntBASIC4.57□□□□□ -1.68
NKX2-1P43699 AC090155.1-201ENST00000520800 407 ntTSL 3 BASIC4.57□□□□□ -1.68
NKX2-1P43699 BAALC-AS1-205ENST00000521102 613 ntTSL 3 BASIC4.57□□□□□ -1.68
NKX2-1P43699 AC013701.1-201ENST00000522657 465 ntBASIC4.57□□□□□ -1.68
NKX2-1P43699 AC068339.2-201ENST00000534395 618 ntBASIC4.57□□□□□ -1.68
NKX2-1P43699 LINC02258-201ENST00000551280 777 ntTSL 2 BASIC4.57□□□□□ -1.68
NKX2-1P43699 CNEP1R1-204ENST00000562576 656 ntTSL 5 BASIC4.57□□□□□ -1.68
NKX2-1P43699 AC068408.2-201ENST00000584566 439 ntTSL 3 BASIC4.57□□□□□ -1.68
NKX2-1P43699 AC097717.1-230ENST00000597051 738 ntTSL 3 BASIC4.57□□□□□ -1.68
NKX2-1P43699 AC245884.10-201ENST00000597355 337 ntBASIC4.57□□□□□ -1.68
NKX2-1P43699 WBP1LP12-201ENST00000604449 331 ntBASIC4.57□□□□□ -1.68
NKX2-1P43699 AC091769.2-201ENST00000605385 479 ntTSL 4 BASIC4.57□□□□□ -1.68
NKX2-1P43699 AC092681.3-201ENST00000609463 678 ntBASIC4.57□□□□□ -1.68
NKX2-1P43699 AL080312.2-201ENST00000613001 630 ntBASIC4.57□□□□□ -1.68
NKX2-1P43699 ZNF630-AS1-201ENST00000614448 397 ntTSL 3 BASIC4.57□□□□□ -1.68
NKX2-1P43699 AC090607.5-201ENST00000615692 224 ntBASIC4.57□□□□□ -1.68
NKX2-1P43699 AP004607.9-201ENST00000618202 316 ntBASIC4.57□□□□□ -1.68
NKX2-1P43699 MIR6823-201ENST00000622118 61 ntBASIC4.57□□□□□ -1.68
NKX2-1P43699 SNHG5-221ENST00000624295 632 ntTSL 5 BASIC4.57□□□□□ -1.68
NKX2-1P43699 AC244205.1-201ENST00000624935 705 ntTSL 2 BASIC4.57□□□□□ -1.68
NKX2-1P43699 LINC01955-201ENST00000626392 792 ntTSL 5 BASIC4.57□□□□□ -1.68
NKX2-1P43699 CASC15-208ENST00000636388 1174 ntTSL 5 BASIC4.57□□□□□ -1.68
NKX2-1P43699 AC134980.1-208ENST00000640228 535 ntTSL 5 BASIC4.57□□□□□ -1.68
NKX2-1P43699 AC144833.1-201ENST00000567953 4089 ntBASIC4.57□□□□□ -1.68
NKX2-1P43699 AC093849.1-201ENST00000563631 2209 ntBASIC4.57□□□□□ -1.68
NKX2-1P43699 AC010266.2-201ENST00000564741 3255 ntBASIC4.57□□□□□ -1.68
NKX2-1P43699 ERP27-201ENST00000266397 2096 ntAPPRIS P1 TSL 1 (best) BASIC4.57□□□□□ -1.68
NKX2-1P43699 RANBP3L-204ENST00000515759 1532 ntTSL 2 BASIC4.56□□□□□ -1.68
NKX2-1P43699 CDKL3-210ENST00000523832 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC4.56□□□□□ -1.68
NKX2-1P43699 PIGK-203ENST00000445065 4318 ntTSL 1 (best) BASIC4.56□□□□□ -1.68
NKX2-1P43699 ZNF573-208ENST00000536220 2257 ntAPPRIS P1 TSL 3 BASIC4.56□□□□□ -1.68
NKX2-1P43699 AC022893.1-201ENST00000517664 3549 ntTSL 2 BASIC4.56□□□□□ -1.68
NKX2-1P43699 SRSF11-201ENST00000370949 3034 ntTSL 1 (best) BASIC4.56□□□□□ -1.68
NKX2-1P43699 GLRA2-202ENST00000355020 1730 ntAPPRIS ALT1 TSL 1 (best) BASIC4.56□□□□□ -1.68
NKX2-1P43699 CTAGE5-201ENST00000280082 2554 ntTSL 1 (best) BASIC4.56□□□□□ -1.68
NKX2-1P43699 CFAP97-201ENST00000296775 903 ntTSL 5 BASIC4.56□□□□□ -1.68
NKX2-1P43699 CLEC4A-203ENST00000352620 615 ntTSL 1 (best) BASIC4.56□□□□□ -1.68
NKX2-1P43699 SPRR2G-201ENST00000368748 568 ntAPPRIS P1 TSL 1 (best) BASIC4.56□□□□□ -1.68
NKX2-1P43699 SNORD56.6-201ENST00000384569 71 ntBASIC4.56□□□□□ -1.68
NKX2-1P43699 TMBIM4-203ENST00000398033 844 ntTSL 1 (best) BASIC4.56□□□□□ -1.68
NKX2-1P43699 GNAT3-201ENST00000398291 1159 ntAPPRIS P1 TSL 1 (best) BASIC4.56□□□□□ -1.68
NKX2-1P43699 RN7SKP222-201ENST00000410651 315 ntBASIC4.56□□□□□ -1.68
NKX2-1P43699 HSD17B7P1-201ENST00000412419 1017 ntBASIC4.56□□□□□ -1.68
NKX2-1P43699 AL606970.4-201ENST00000424343 455 ntTSL 2 BASIC4.56□□□□□ -1.68
NKX2-1P43699 VN1R42P-201ENST00000424651 344 ntBASIC4.56□□□□□ -1.68
NKX2-1P43699 AC099060.1-201ENST00000427806 448 ntTSL 3 BASIC4.56□□□□□ -1.68
NKX2-1P43699 LINC01731-201ENST00000428035 420 ntTSL 3 BASIC4.56□□□□□ -1.68
NKX2-1P43699 RPL7AP49-201ENST00000429522 581 ntBASIC4.56□□□□□ -1.68
NKX2-1P43699 AL591438.1-201ENST00000433508 581 ntBASIC4.56□□□□□ -1.68
NKX2-1P43699 MTCO1P52-201ENST00000433928 531 ntBASIC4.56□□□□□ -1.68
NKX2-1P43699 MTND2P2-201ENST00000434633 945 ntBASIC4.56□□□□□ -1.68
NKX2-1P43699 Z93403.1-202ENST00000440002 713 ntTSL 3 BASIC4.56□□□□□ -1.68
NKX2-1P43699 AC011196.1-201ENST00000451816 595 ntTSL 2 BASIC4.56□□□□□ -1.68
NKX2-1P43699 AC073476.1-201ENST00000452854 407 ntBASIC4.56□□□□□ -1.68
NKX2-1P43699 AC078883.3-201ENST00000458314 512 ntTSL 2 BASIC4.56□□□□□ -1.68
NKX2-1P43699 RN7SL72P-201ENST00000460697 269 ntBASIC4.56□□□□□ -1.68
NKX2-1P43699 UBFD1P1-201ENST00000473259 814 ntBASIC4.56□□□□□ -1.68
NKX2-1P43699 AP000797.2-201ENST00000475768 606 ntBASIC4.56□□□□□ -1.68
NKX2-1P43699 RPL29P23-201ENST00000486188 442 ntBASIC4.56□□□□□ -1.68
NKX2-1P43699 RN7SL362P-201ENST00000494228 267 ntBASIC4.56□□□□□ -1.68
Retrieved 100 of 98,524 protein–RNA pairs in 80.2 ms