Protein–RNA interactions for Protein: P43307

SSR1, Translocon-associated protein subunit alpha, humanhuman

Known RBP Predictions only

Length 286 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSR1P43307 RNASE2-201ENST00000304625 755 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.5
SSR1P43307 CDY17P-201ENST00000414121 1282 ntBASIC5.65□□□□□ -1.5
SSR1P43307 HYALP1-201ENST00000417674 1279 ntBASIC5.65□□□□□ -1.5
SSR1P43307 GAPDHP49-201ENST00000421421 961 ntBASIC5.65□□□□□ -1.5
SSR1P43307 AL391987.2-201ENST00000421848 492 ntTSL 5 BASIC5.65□□□□□ -1.5
SSR1P43307 AL390115.1-201ENST00000425271 423 ntTSL 5 BASIC5.65□□□□□ -1.5
SSR1P43307 AC012594.1-271ENST00000438635 736 ntTSL 3 BASIC5.65□□□□□ -1.5
SSR1P43307 AC084754.1-201ENST00000463466 464 ntBASIC5.65□□□□□ -1.5
SSR1P43307 RN7SL214P-201ENST00000487317 265 ntBASIC5.65□□□□□ -1.5
SSR1P43307 SEMA6A-AS1-202ENST00000508424 862 ntTSL 3 BASIC5.65□□□□□ -1.5
SSR1P43307 HMGB3P13-201ENST00000511263 607 ntBASIC5.65□□□□□ -1.5
SSR1P43307 MAL2-201ENST00000522112 573 ntTSL 4 BASIC5.65□□□□□ -1.5
SSR1P43307 AC103855.1-201ENST00000525926 564 ntTSL 2 BASIC5.65□□□□□ -1.5
SSR1P43307 AP004607.2-201ENST00000533949 322 ntBASIC5.65□□□□□ -1.5
SSR1P43307 AC078878.1-201ENST00000539832 958 ntBASIC5.65□□□□□ -1.5
SSR1P43307 AL139354.1-201ENST00000554319 645 ntTSL 5 BASIC5.65□□□□□ -1.5
SSR1P43307 AC018767.2-201ENST00000562361 600 ntTSL 5 BASIC5.65□□□□□ -1.5
SSR1P43307 AC087190.2-201ENST00000565648 731 ntTSL 3 BASIC5.65□□□□□ -1.5
SSR1P43307 AC010547.6-201ENST00000571789 193 ntBASIC5.65□□□□□ -1.5
SSR1P43307 AC008521.2-201ENST00000591021 259 ntBASIC5.65□□□□□ -1.5
SSR1P43307 AC027243.2-201ENST00000602530 724 ntBASIC5.65□□□□□ -1.5
SSR1P43307 Metazoa_SRP.207-201ENST00000612254 285 ntBASIC5.65□□□□□ -1.5
SSR1P43307 PXT1-202ENST00000619547 619 ntAPPRIS ALT2 TSL 1 (best) BASIC5.65□□□□□ -1.5
SSR1P43307 AC079906.1-201ENST00000621214 815 ntTSL 3 BASIC5.65□□□□□ -1.5
SSR1P43307 AC134980.1-203ENST00000640541 570 ntTSL 4 BASIC5.65□□□□□ -1.5
SSR1P43307 ASNSP1-201ENST00000518311 1939 ntBASIC5.65□□□□□ -1.51
SSR1P43307 C1orf141-208ENST00000621590 4179 ntAPPRIS ALT2 TSL 5 BASIC5.65□□□□□ -1.51
SSR1P43307 AC104623.2-202ENST00000623477 4002 ntBASIC5.65□□□□□ -1.51
SSR1P43307 FYB1-201ENST00000351578 4750 ntAPPRIS P3 TSL 1 (best) BASIC5.65□□□□□ -1.51
SSR1P43307 ZNF534-202ENST00000332323 2086 ntAPPRIS P4 TSL 1 (best) BASIC5.65□□□□□ -1.51
SSR1P43307 SRRM1-203ENST00000447431 3691 ntAPPRIS ALT2 TSL 5 BASIC5.64□□□□□ -1.51
SSR1P43307 Z83820.1-201ENST00000456978 1499 ntBASIC5.64□□□□□ -1.51
SSR1P43307 OR5AU1-203ENST00000641697 7755 ntAPPRIS P1 BASIC5.64□□□□□ -1.51
SSR1P43307 DAZ4-205ENST00000440066 1891 ntTSL 5 BASIC5.64□□□□□ -1.51
SSR1P43307 DAZ1-206ENST00000620725 1891 ntTSL 5 BASIC5.64□□□□□ -1.51
SSR1P43307 OR56A1-202ENST00000641423 6096 ntAPPRIS P1 BASIC5.64□□□□□ -1.51
SSR1P43307 NUP155-202ENST00000381843 4200 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
SSR1P43307 CALCOCO2-204ENST00000448105 1916 ntTSL 2 BASIC5.64□□□□□ -1.51
SSR1P43307 UBR5-204ENST00000518205 1931 ntTSL 5 BASIC5.64□□□□□ -1.51
SSR1P43307 FHIT-201ENST00000341848 174 ntTSL 3 BASIC5.64□□□□□ -1.51
SSR1P43307 RNA5SP319-201ENST00000362768 119 ntBASIC5.64□□□□□ -1.51
SSR1P43307 UBBP2-201ENST00000376781 231 ntBASIC5.64□□□□□ -1.51
SSR1P43307 RAB5CP1-201ENST00000395972 580 ntBASIC5.64□□□□□ -1.51
SSR1P43307 AL596448.1-201ENST00000415024 392 ntBASIC5.64□□□□□ -1.51
SSR1P43307 AC009302.1-201ENST00000417147 390 ntBASIC5.64□□□□□ -1.51
SSR1P43307 AC004690.1-201ENST00000418216 328 ntBASIC5.64□□□□□ -1.51
SSR1P43307 RPL7AP49-201ENST00000429522 581 ntBASIC5.64□□□□□ -1.51
SSR1P43307 RPL12P17-201ENST00000432393 498 ntBASIC5.64□□□□□ -1.51
SSR1P43307 AL591438.1-201ENST00000433508 581 ntBASIC5.64□□□□□ -1.51
SSR1P43307 PCBP1-AS1-232ENST00000442040 1111 ntTSL 3 BASIC5.64□□□□□ -1.51
SSR1P43307 LINC01880-201ENST00000446593 561 ntTSL 4 BASIC5.64□□□□□ -1.51
SSR1P43307 AC093607.1-202ENST00000499715 559 ntTSL 4 BASIC5.64□□□□□ -1.51
SSR1P43307 ARL4AP1-201ENST00000503220 705 ntBASIC5.64□□□□□ -1.51
SSR1P43307 RN7SKP34-201ENST00000516142 244 ntBASIC5.64□□□□□ -1.51
SSR1P43307 NRBF2P4-201ENST00000520874 850 ntBASIC5.64□□□□□ -1.51
SSR1P43307 AC073569.1-201ENST00000548469 667 ntTSL 2 BASIC5.64□□□□□ -1.51
SSR1P43307 LINC00933-205ENST00000560917 449 ntTSL 3 BASIC5.64□□□□□ -1.51
SSR1P43307 IGLCOR22-2-201ENST00000605398 313 ntBASIC5.64□□□□□ -1.51
SSR1P43307 AC105402.3-203ENST00000608822 885 ntTSL 5 BASIC5.64□□□□□ -1.51
SSR1P43307 AL159169.2-201ENST00000610061 1269 ntBASIC5.64□□□□□ -1.51
SSR1P43307 AL163952.1-201ENST00000612704 916 ntTSL 5 BASIC5.64□□□□□ -1.51
SSR1P43307 RN7SL787P-201ENST00000613000 284 ntBASIC5.64□□□□□ -1.51
SSR1P43307 AC026367.3-201ENST00000619032 590 ntBASIC5.64□□□□□ -1.51
SSR1P43307 AC097495.1-201ENST00000637675 546 ntAPPRIS P1 TSL 5 BASIC5.64□□□□□ -1.51
SSR1P43307 AC000374.1-201ENST00000434698 1745 ntBASIC5.64□□□□□ -1.51
SSR1P43307 FAM19A2-215ENST00000551619 2718 ntAPPRIS P1 TSL 2 BASIC5.64□□□□□ -1.51
SSR1P43307 MIPEPP2-201ENST00000422560 1819 ntBASIC5.64□□□□□ -1.51
SSR1P43307 BAALC-AS1-201ENST00000499522 1353 ntTSL 5 BASIC5.64□□□□□ -1.51
SSR1P43307 AC020743.2-201ENST00000639870 1370 ntTSL 5 BASIC5.64□□□□□ -1.51
SSR1P43307 ADAM18-202ENST00000379866 2314 ntAPPRIS ALT2 TSL 1 (best) BASIC5.64□□□□□ -1.51
SSR1P43307 CTAGE5-210ENST00000553728 4392 ntAPPRIS ALT2 TSL 5 BASIC5.64□□□□□ -1.51
SSR1P43307 OR13C1P-202ENST00000641378 2919 ntBASIC5.64□□□□□ -1.51
SSR1P43307 RNF19BPY-201ENST00000458209 1550 ntBASIC5.63□□□□□ -1.51
SSR1P43307 MED12L-201ENST00000273432 6401 ntTSL 2 BASIC5.63□□□□□ -1.51
SSR1P43307 TRIQK-206ENST00000518748 3563 ntAPPRIS P1 TSL 1 (best) BASIC5.63□□□□□ -1.51
SSR1P43307 PLCE1-202ENST00000371380 12024 ntAPPRIS P3 TSL 1 (best) BASIC5.63□□□□□ -1.51
SSR1P43307 ZNF83-203ENST00000541777 3743 ntAPPRIS P1 TSL 1 (best) BASIC5.63□□□□□ -1.51
SSR1P43307 TMSB4XP4-201ENST00000323496 618 ntBASIC5.63□□□□□ -1.51
SSR1P43307 AC017019.1-201ENST00000426129 261 ntBASIC5.63□□□□□ -1.51
SSR1P43307 AL136140.1-201ENST00000436113 473 ntTSL 3 BASIC5.63□□□□□ -1.51
SSR1P43307 AL121957.1-202ENST00000437040 329 ntTSL 3 BASIC5.63□□□□□ -1.51
SSR1P43307 AC245427.2-201ENST00000438839 263 ntTSL 3 BASIC5.63□□□□□ -1.51
SSR1P43307 HMGN1P36-201ENST00000446623 298 ntBASIC5.63□□□□□ -1.51
SSR1P43307 RPL31P15-201ENST00000449770 338 ntBASIC5.63□□□□□ -1.51
SSR1P43307 AL672138.1-201ENST00000450604 1015 ntBASIC5.63□□□□□ -1.51
SSR1P43307 AC022133.1-201ENST00000490961 571 ntBASIC5.63□□□□□ -1.51
SSR1P43307 NDUFB4P12-201ENST00000513465 390 ntBASIC5.63□□□□□ -1.51
SSR1P43307 LINC00992-202ENST00000514186 564 ntTSL 5 BASIC5.63□□□□□ -1.51
SSR1P43307 AC008705.1-201ENST00000518837 489 ntTSL 3 BASIC5.63□□□□□ -1.51
SSR1P43307 KCTD9P6-201ENST00000522306 950 ntBASIC5.63□□□□□ -1.51
SSR1P43307 POLR2K-203ENST00000522439 543 ntTSL 2 BASIC5.63□□□□□ -1.51
SSR1P43307 CASC19-203ENST00000523510 575 ntTSL 3 BASIC5.63□□□□□ -1.51
SSR1P43307 AC130364.2-201ENST00000528639 604 ntBASIC5.63□□□□□ -1.51
SSR1P43307 AC009562.1-202ENST00000558755 565 ntTSL 4 BASIC5.63□□□□□ -1.51
SSR1P43307 AC015660.3-201ENST00000559569 198 ntTSL 3 BASIC5.63□□□□□ -1.51
SSR1P43307 AC005341.1-201ENST00000571086 708 ntBASIC5.63□□□□□ -1.51
SSR1P43307 AP005131.3-201ENST00000590042 665 ntTSL 3 BASIC5.63□□□□□ -1.51
SSR1P43307 AC010463.2-201ENST00000597592 661 ntTSL 5 BASIC5.63□□□□□ -1.51
SSR1P43307 AL160400.1-201ENST00000606385 1030 ntTSL 1 (best) BASIC5.63□□□□□ -1.51
SSR1P43307 AL353600.1-201ENST00000608148 251 ntBASIC5.63□□□□□ -1.51
Retrieved 100 of 98,524 protein–RNA pairs in 86.3 ms