Protein–RNA interactions for Protein: P42898

MTHFR, Methylenetetrahydrofolate reductase, humanhuman

Predictions only

Length 656 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MTHFRP42898 AC004076.2-201ENST00000620532 3323 ntBASIC5.71□□□□□ -1.5
MTHFRP42898 AC139769.2-201ENST00000599944 2291 ntTSL 2 BASIC5.71□□□□□ -1.5
MTHFRP42898 AC012618.3-205ENST00000637896 1496 ntBASIC5.71□□□□□ -1.5
MTHFRP42898 OR9K1P-202ENST00000641111 3217 ntBASIC5.7□□□□□ -1.5
MTHFRP42898 FAM26D-201ENST00000368596 1353 ntAPPRIS P1 TSL 5 BASIC5.7□□□□□ -1.5
MTHFRP42898 DNAJC28-202ENST00000381947 1354 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
MTHFRP42898 ALKBH3-AS1-201ENST00000499194 1906 ntTSL 2 BASIC5.7□□□□□ -1.5
MTHFRP42898 PHLDB2-214ENST00000495180 4159 ntTSL 2 BASIC5.7□□□□□ -1.5
MTHFRP42898 MAK-204ENST00000536370 3767 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
MTHFRP42898 CASP10-204ENST00000346817 3926 ntAPPRIS ALT2 TSL 5 BASIC5.7□□□□□ -1.5
MTHFRP42898 ZEB1-219ENST00000560721 3368 ntAPPRIS ALT2 TSL 2 BASIC5.7□□□□□ -1.5
MTHFRP42898 OR5M8-201ENST00000327216 1047 ntAPPRIS P1 BASIC5.7□□□□□ -1.5
MTHFRP42898 AL607077.1-201ENST00000401718 499 ntBASIC5.7□□□□□ -1.5
MTHFRP42898 MTND3P20-201ENST00000407663 186 ntBASIC5.7□□□□□ -1.5
MTHFRP42898 RN7SKP126-201ENST00000411143 300 ntBASIC5.7□□□□□ -1.5
MTHFRP42898 AL049649.1-202ENST00000412405 414 ntTSL 3 BASIC5.7□□□□□ -1.5
MTHFRP42898 CRIP1P1-201ENST00000427567 185 ntBASIC5.7□□□□□ -1.5
MTHFRP42898 AC092168.2-201ENST00000430586 717 ntTSL 3 BASIC5.7□□□□□ -1.5
MTHFRP42898 AL354863.1-202ENST00000431695 494 ntTSL 5 BASIC5.7□□□□□ -1.5
MTHFRP42898 KCNIP1-205ENST00000434108 726 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
MTHFRP42898 AL392003.1-201ENST00000434394 243 ntBASIC5.7□□□□□ -1.5
MTHFRP42898 AL596266.1-201ENST00000448132 400 ntBASIC5.7□□□□□ -1.5
MTHFRP42898 RAB28P3-201ENST00000448325 597 ntBASIC5.7□□□□□ -1.5
MTHFRP42898 RBMY2TP-201ENST00000451162 947 ntBASIC5.7□□□□□ -1.5
MTHFRP42898 Z99916.1-201ENST00000454253 482 ntTSL 3 BASIC5.7□□□□□ -1.5
MTHFRP42898 RPS3AP41-201ENST00000462701 778 ntBASIC5.7□□□□□ -1.5
MTHFRP42898 CREM-228ENST00000473940 1182 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
MTHFRP42898 GIMAP2-202ENST00000474605 309 ntTSL 3 BASIC5.7□□□□□ -1.5
MTHFRP42898 AK5-208ENST00000478255 556 ntTSL 2 BASIC5.7□□□□□ -1.5
MTHFRP42898 PTPN20-212ENST00000502254 599 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
MTHFRP42898 AC010425.1-201ENST00000511734 554 ntTSL 4 BASIC5.7□□□□□ -1.5
MTHFRP42898 AC078899.1-201ENST00000521432 1185 ntBASIC5.7□□□□□ -1.5
MTHFRP42898 AC024940.3-201ENST00000538551 316 ntBASIC5.7□□□□□ -1.5
MTHFRP42898 AC139697.1-201ENST00000548429 745 ntBASIC5.7□□□□□ -1.5
MTHFRP42898 AC087477.3-201ENST00000559214 552 ntTSL 4 BASIC5.7□□□□□ -1.5
MTHFRP42898 AC084759.1-201ENST00000561168 290 ntBASIC5.7□□□□□ -1.5
MTHFRP42898 AC007495.2-201ENST00000562822 459 ntTSL 3 BASIC5.7□□□□□ -1.5
MTHFRP42898 SNORD39.2-201ENST00000579995 76 ntBASIC5.7□□□□□ -1.5
MTHFRP42898 AC005224.3-201ENST00000584683 2140 ntBASIC5.7□□□□□ -1.5
MTHFRP42898 FAM60CP-201ENST00000591086 664 ntBASIC5.7□□□□□ -1.5
MTHFRP42898 AC020915.5-201ENST00000596836 964 ntBASIC5.7□□□□□ -1.5
MTHFRP42898 AC007193.1-201ENST00000599645 448 ntTSL 5 BASIC5.7□□□□□ -1.5
MTHFRP42898 AC002069.2-201ENST00000603580 883 ntBASIC5.7□□□□□ -1.5
MTHFRP42898 BX322635.1-201ENST00000605804 496 ntBASIC5.7□□□□□ -1.5
MTHFRP42898 MILR1-203ENST00000615220 1196 ntAPPRIS P3 TSL 2 BASIC5.7□□□□□ -1.5
MTHFRP42898 MIR6810-201ENST00000622701 70 ntBASIC5.7□□□□□ -1.5
MTHFRP42898 PRKCQ-AS1-218ENST00000624974 1132 ntTSL 5 BASIC5.7□□□□□ -1.5
MTHFRP42898 AC005972.4-201ENST00000636248 1131 ntTSL 5 BASIC5.7□□□□□ -1.5
MTHFRP42898 NOSTRIN-201ENST00000317647 2294 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
MTHFRP42898 OR2T7-202ENST00000641557 3409 ntAPPRIS P1 BASIC5.7□□□□□ -1.5
MTHFRP42898 GAPVD1-206ENST00000394104 6737 ntTSL 2 BASIC5.7□□□□□ -1.5
MTHFRP42898 RLIMP2-201ENST00000427891 1563 ntBASIC5.7□□□□□ -1.5
MTHFRP42898 ANK3-201ENST00000280772 16874 ntAPPRIS P3 TSL 1 (best) BASIC5.7□□□□□ -1.5
MTHFRP42898 SLC4A7-206ENST00000428386 7385 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
MTHFRP42898 DNAH12-203ENST00000389536 2613 ntTSL 5 BASIC5.7□□□□□ -1.5
MTHFRP42898 AC092451.3-201ENST00000625067 1343 ntBASIC5.7□□□□□ -1.5
MTHFRP42898 SDAD1-203ENST00000395711 2513 ntTSL 2 BASIC5.7□□□□□ -1.5
MTHFRP42898 ZNF658-201ENST00000612867 4160 ntAPPRIS P1 TSL 2 BASIC5.7□□□□□ -1.5
MTHFRP42898 PHACTR2-207ENST00000427704 9531 ntAPPRIS ALT2 TSL 1 (best) BASIC5.69□□□□□ -1.5
MTHFRP42898 MTRNR2L3-201ENST00000543500 1539 ntAPPRIS P1 BASIC5.69□□□□□ -1.5
MTHFRP42898 AP000473.2-201ENST00000602659 1537 ntBASIC5.69□□□□□ -1.5
MTHFRP42898 SAMM50P1-201ENST00000455403 1399 ntBASIC5.69□□□□□ -1.5
MTHFRP42898 AC079915.1-201ENST00000584382 2780 ntTSL 2 BASIC5.69□□□□□ -1.5
MTHFRP42898 DST-205ENST00000370765 8999 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
MTHFRP42898 ZNF615-201ENST00000376716 4048 ntAPPRIS P3 TSL 2 BASIC5.69□□□□□ -1.5
MTHFRP42898 USP7-202ENST00000381886 3587 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
MTHFRP42898 CASC15-206ENST00000606851 1889 ntTSL 2 BASIC5.69□□□□□ -1.5
MTHFRP42898 NXT2-201ENST00000218004 2692 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
MTHFRP42898 CD96-203ENST00000438817 1565 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
MTHFRP42898 ZNF780A-204ENST00000455521 3600 ntAPPRIS ALT2 TSL 5 BASIC5.69□□□□□ -1.5
MTHFRP42898 DCDC1-203ENST00000406071 4758 ntAPPRIS P2 TSL 5 BASIC5.69□□□□□ -1.5
MTHFRP42898 FCER1G-201ENST00000289902 591 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
MTHFRP42898 MIR365B-201ENST00000362317 111 ntBASIC5.69□□□□□ -1.5
MTHFRP42898 U3.10-201ENST00000364459 214 ntBASIC5.69□□□□□ -1.5
MTHFRP42898 SNORA16A-201ENST00000384342 137 ntBASIC5.69□□□□□ -1.5
MTHFRP42898 RNU6-1320P-201ENST00000390838 107 ntBASIC5.69□□□□□ -1.5
MTHFRP42898 RNU6-1269P-201ENST00000391139 107 ntBASIC5.69□□□□□ -1.5
MTHFRP42898 OR2A25-201ENST00000408898 1014 ntAPPRIS P1 BASIC5.69□□□□□ -1.5
MTHFRP42898 AC079790.1-201ENST00000420365 507 ntTSL 3 BASIC5.69□□□□□ -1.5
MTHFRP42898 AC007161.1-204ENST00000423039 460 ntBASIC5.69□□□□□ -1.5
MTHFRP42898 AC104837.2-201ENST00000427236 424 ntBASIC5.69□□□□□ -1.5
MTHFRP42898 HMGB3P10-201ENST00000434734 572 ntBASIC5.69□□□□□ -1.5
MTHFRP42898 AL161618.1-201ENST00000438738 761 ntTSL 5 BASIC5.69□□□□□ -1.5
MTHFRP42898 MACROD2-IT1-201ENST00000448536 665 ntTSL 5 BASIC5.69□□□□□ -1.5
MTHFRP42898 RNU6-599P-201ENST00000459383 107 ntBASIC5.69□□□□□ -1.5
MTHFRP42898 RNU6-1193P-201ENST00000459461 107 ntBASIC5.69□□□□□ -1.5
MTHFRP42898 RPS4XP20-201ENST00000505751 772 ntBASIC5.69□□□□□ -1.5
MTHFRP42898 AC091180.4-201ENST00000511322 245 ntTSL 2 BASIC5.69□□□□□ -1.5
MTHFRP42898 AC097486.1-201ENST00000515331 210 ntBASIC5.69□□□□□ -1.5
MTHFRP42898 SDCBP-207ENST00000520168 1097 ntTSL 2 BASIC5.69□□□□□ -1.5
MTHFRP42898 AC025437.5-201ENST00000522769 314 ntTSL 3 BASIC5.69□□□□□ -1.5
MTHFRP42898 AC005906.2-204ENST00000541095 481 ntTSL 3 BASIC5.69□□□□□ -1.5
MTHFRP42898 GSTP1P1-201ENST00000548078 319 ntBASIC5.69□□□□□ -1.5
MTHFRP42898 DUXA-201ENST00000554048 1006 ntAPPRIS P1 TSL 3 BASIC5.69□□□□□ -1.5
MTHFRP42898 AC127381.1-201ENST00000555979 939 ntBASIC5.69□□□□□ -1.5
MTHFRP42898 NMNAT1P5-201ENST00000559657 841 ntBASIC5.69□□□□□ -1.5
MTHFRP42898 AC013652.1-202ENST00000561058 570 ntTSL 4 BASIC5.69□□□□□ -1.5
MTHFRP42898 AC026464.3-201ENST00000563634 564 ntAPPRIS P1 TSL 4 BASIC5.69□□□□□ -1.5
MTHFRP42898 AC005341.1-201ENST00000571086 708 ntBASIC5.69□□□□□ -1.5
MTHFRP42898 MIR4330-201ENST00000579077 105 ntBASIC5.69□□□□□ -1.5
Retrieved 100 of 98,524 protein–RNA pairs in 81.8 ms