Protein–RNA interactions for Protein: P41235

HNF4A, Hepatocyte nuclear factor 4-alpha, humanhuman

Predictions only

Length 474 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HNF4AP41235 AL031674.1-202ENST00000413070 465 ntTSL 3 BASIC5.33□□□□□ -1.56
HNF4AP41235 AC099336.2-201ENST00000422457 254 ntBASIC5.33□□□□□ -1.56
HNF4AP41235 AL133173.1-201ENST00000423458 397 ntBASIC5.33□□□□□ -1.56
HNF4AP41235 AC006455.6-201ENST00000426192 893 ntBASIC5.33□□□□□ -1.56
HNF4AP41235 NPM1P22-201ENST00000427761 952 ntBASIC5.33□□□□□ -1.56
HNF4AP41235 AL389925.1-201ENST00000432257 728 ntBASIC5.33□□□□□ -1.56
HNF4AP41235 AC002504.1-201ENST00000438281 691 ntBASIC5.33□□□□□ -1.56
HNF4AP41235 PCBP1-AS1-232ENST00000442040 1111 ntTSL 3 BASIC5.33□□□□□ -1.56
HNF4AP41235 RPL7L1P1-201ENST00000448259 785 ntBASIC5.33□□□□□ -1.56
HNF4AP41235 MORF4L1P4-201ENST00000450245 976 ntBASIC5.33□□□□□ -1.56
HNF4AP41235 Z99127.1-201ENST00000452442 670 ntTSL 5 BASIC5.33□□□□□ -1.56
HNF4AP41235 SETP20-201ENST00000457046 852 ntBASIC5.33□□□□□ -1.56
HNF4AP41235 AC099560.2-201ENST00000457554 255 ntBASIC5.33□□□□□ -1.56
HNF4AP41235 RN7SL583P-201ENST00000475692 287 ntBASIC5.33□□□□□ -1.56
HNF4AP41235 PPIAP19-201ENST00000486414 492 ntBASIC5.33□□□□□ -1.56
HNF4AP41235 CLEC19A-204ENST00000493231 557 ntTSL 3 BASIC5.33□□□□□ -1.56
HNF4AP41235 AC104109.1-201ENST00000498563 436 ntBASIC5.33□□□□□ -1.56
HNF4AP41235 PTPN20-212ENST00000502254 599 ntTSL 1 (best) BASIC5.33□□□□□ -1.56
HNF4AP41235 AC138866.2-201ENST00000508650 584 ntBASIC5.33□□□□□ -1.56
HNF4AP41235 AC091912.1-201ENST00000511351 248 ntBASIC5.33□□□□□ -1.56
HNF4AP41235 NRBF2P4-201ENST00000520874 850 ntBASIC5.33□□□□□ -1.56
HNF4AP41235 CASP1-206ENST00000526568 1061 ntTSL 1 (best) BASIC5.33□□□□□ -1.56
HNF4AP41235 CASP1-216ENST00000534497 825 ntTSL 5 BASIC5.33□□□□□ -1.56
HNF4AP41235 SNHG1-205ENST00000537869 1038 ntTSL 3 BASIC5.33□□□□□ -1.56
HNF4AP41235 SLC7A7-210ENST00000554517 1158 ntTSL 5 BASIC5.33□□□□□ -1.56
HNF4AP41235 AC007601.2-201ENST00000566957 502 ntTSL 3 BASIC5.33□□□□□ -1.56
HNF4AP41235 RBM22P12-201ENST00000567098 1255 ntBASIC5.33□□□□□ -1.56
HNF4AP41235 AC010547.6-201ENST00000571789 193 ntBASIC5.33□□□□□ -1.56
HNF4AP41235 AC010463.2-201ENST00000597592 661 ntTSL 5 BASIC5.33□□□□□ -1.56
HNF4AP41235 AC009237.13-201ENST00000603193 276 ntBASIC5.33□□□□□ -1.56
HNF4AP41235 PPATP2-201ENST00000605635 508 ntBASIC5.33□□□□□ -1.56
HNF4AP41235 Metazoa_SRP.130-201ENST00000622625 267 ntBASIC5.33□□□□□ -1.56
HNF4AP41235 SLC35A1-205ENST00000622775 1206 ntTSL 5 BASIC5.33□□□□□ -1.56
HNF4AP41235 AP002008.2-205ENST00000637111 1091 ntTSL 5 BASIC5.33□□□□□ -1.56
HNF4AP41235 CCDC195-201ENST00000638102 606 ntAPPRIS P1 TSL 5 BASIC5.33□□□□□ -1.56
HNF4AP41235 AC008691.1-209ENST00000642094 814 ntBASIC5.33□□□□□ -1.56
HNF4AP41235 APAF1-205ENST00000547045 3744 ntAPPRIS ALT1 TSL 1 (best) BASIC5.33□□□□□ -1.56
HNF4AP41235 ZNF280B-201ENST00000613655 3714 ntAPPRIS P1 TSL 5 BASIC5.33□□□□□ -1.56
HNF4AP41235 HSPD1P11-201ENST00000508643 1702 ntBASIC5.33□□□□□ -1.56
HNF4AP41235 METTL15-201ENST00000303459 4068 ntTSL 2 BASIC5.33□□□□□ -1.56
HNF4AP41235 AK9-204ENST00000424296 6326 ntAPPRIS P1 TSL 5 BASIC5.33□□□□□ -1.56
HNF4AP41235 LIMA1-203ENST00000547825 3920 ntAPPRIS ALT2 TSL 1 (best) BASIC5.33□□□□□ -1.56
HNF4AP41235 AP001267.1-201ENST00000531742 2074 ntTSL 2 BASIC5.33□□□□□ -1.56
HNF4AP41235 KCNJ10-205ENST00000638728 4351 ntAPPRIS P1 TSL 5 BASIC5.33□□□□□ -1.56
HNF4AP41235 OR10G7-202ENST00000641585 3449 ntAPPRIS P1 BASIC5.33□□□□□ -1.56
HNF4AP41235 USP8-201ENST00000307179 4243 ntAPPRIS P1 TSL 1 (best) BASIC5.33□□□□□ -1.56
HNF4AP41235 ADH6-202ENST00000394897 3337 ntTSL 2 BASIC5.33□□□□□ -1.56
HNF4AP41235 NPSR1-AS1-202ENST00000419766 4821 ntTSL 1 (best) BASIC5.32□□□□□ -1.56
HNF4AP41235 PHACTR2P1-201ENST00000605639 1414 ntBASIC5.32□□□□□ -1.56
HNF4AP41235 NBPF10-201ENST00000583866 13042 ntAPPRIS P1 TSL 5 BASIC5.32□□□□□ -1.56
HNF4AP41235 ZNF143-201ENST00000299606 2562 ntTSL 5 BASIC5.32□□□□□ -1.56
HNF4AP41235 BICRAL-201ENST00000314073 6530 ntAPPRIS P1 TSL 1 (best) BASIC5.32□□□□□ -1.56
HNF4AP41235 SMG1P6-201ENST00000532337 2930 ntBASIC5.32□□□□□ -1.56
HNF4AP41235 UGT2A1-205ENST00000512704 2519 ntTSL 1 (best) BASIC5.32□□□□□ -1.56
HNF4AP41235 DYNC1I2-225ENST00000508530 2494 ntAPPRIS ALT1 TSL 1 (best) BASIC5.32□□□□□ -1.56
HNF4AP41235 PCDH15-217ENST00000414778 9234 ntAPPRIS ALT2 TSL 5 BASIC5.32□□□□□ -1.56
HNF4AP41235 PCDH15-227ENST00000614895 9249 ntAPPRIS ALT2 TSL 5 BASIC5.32□□□□□ -1.56
HNF4AP41235 DSPP-202ENST00000399271 4331 ntAPPRIS P1 TSL 5 BASIC5.32□□□□□ -1.56
HNF4AP41235 PSG7-201ENST00000406070 2025 ntAPPRIS ALT2 TSL 1 (best) BASIC5.32□□□□□ -1.56
HNF4AP41235 MIPOL1-204ENST00000539062 2389 ntTSL 1 (best) BASIC5.32□□□□□ -1.56
HNF4AP41235 MYRFL-201ENST00000299350 820 ntTSL 5 BASIC5.32□□□□□ -1.56
HNF4AP41235 HBG1-201ENST00000330597 808 ntAPPRIS P1 TSL 1 (best) BASIC5.32□□□□□ -1.56
HNF4AP41235 RN7SKP6-201ENST00000364795 319 ntBASIC5.32□□□□□ -1.56
HNF4AP41235 AL139095.4-201ENST00000379928 500 ntTSL 2 BASIC5.32□□□□□ -1.56
HNF4AP41235 RNU6-152P-201ENST00000384037 107 ntBASIC5.32□□□□□ -1.56
HNF4AP41235 RNA5SP122-201ENST00000384457 108 ntBASIC5.32□□□□□ -1.56
HNF4AP41235 RN7SKP286-201ENST00000410894 299 ntBASIC5.32□□□□□ -1.56
HNF4AP41235 AC095032.2-201ENST00000414923 418 ntTSL 2 BASIC5.32□□□□□ -1.56
HNF4AP41235 TNPO1P1-201ENST00000423641 1138 ntBASIC5.32□□□□□ -1.56
HNF4AP41235 TRAPPC2P5-201ENST00000426293 308 ntBASIC5.32□□□□□ -1.56
HNF4AP41235 AC009784.1-201ENST00000426484 460 ntBASIC5.32□□□□□ -1.56
HNF4AP41235 AL031428.1-201ENST00000427154 666 ntTSL 2 BASIC5.32□□□□□ -1.56
HNF4AP41235 LINC02529-201ENST00000429657 772 ntTSL 3 BASIC5.32□□□□□ -1.56
HNF4AP41235 MTCO1P57-201ENST00000432182 261 ntBASIC5.32□□□□□ -1.56
HNF4AP41235 AL353898.1-201ENST00000444055 238 ntBASIC5.32□□□□□ -1.56
HNF4AP41235 AC114877.1-201ENST00000446601 582 ntTSL 4 BASIC5.32□□□□□ -1.56
HNF4AP41235 CASP12-206ENST00000446862 1196 ntTSL 1 (best) BASIC5.32□□□□□ -1.56
HNF4AP41235 AL627224.1-201ENST00000448334 444 ntBASIC5.32□□□□□ -1.56
HNF4AP41235 VDAC2P4-201ENST00000452925 711 ntBASIC5.32□□□□□ -1.56
HNF4AP41235 TAAR4P-201ENST00000454843 1039 ntBASIC5.32□□□□□ -1.56
HNF4AP41235 RPL7AP52-201ENST00000458096 790 ntBASIC5.32□□□□□ -1.56
HNF4AP41235 AC104831.1-201ENST00000470024 444 ntTSL 3 BASIC5.32□□□□□ -1.56
HNF4AP41235 AC093890.1-201ENST00000502554 540 ntBASIC5.32□□□□□ -1.56
HNF4AP41235 RNA5SP230-201ENST00000517039 122 ntBASIC5.32□□□□□ -1.56
HNF4AP41235 SEPT10P1-201ENST00000517342 1162 ntBASIC5.32□□□□□ -1.56
HNF4AP41235 AC022874.1-201ENST00000526382 550 ntTSL 3 BASIC5.32□□□□□ -1.56
HNF4AP41235 AP003049.2-202ENST00000532929 803 ntTSL 3 BASIC5.32□□□□□ -1.56
HNF4AP41235 C11orf74-210ENST00000534635 801 ntAPPRIS ALT2 TSL 2 BASIC5.32□□□□□ -1.56
HNF4AP41235 PWRN4-201ENST00000563016 420 ntTSL 5 BASIC5.32□□□□□ -1.56
HNF4AP41235 AL354733.2-210ENST00000586211 647 ntTSL 5 BASIC5.32□□□□□ -1.56
HNF4AP41235 AC006504.5-202ENST00000586784 656 ntTSL 2 BASIC5.32□□□□□ -1.56
HNF4AP41235 ZNF667-AS1-207ENST00000592146 668 ntTSL 5 BASIC5.32□□□□□ -1.56
HNF4AP41235 AC006504.7-201ENST00000592806 924 ntTSL 3 BASIC5.32□□□□□ -1.56
HNF4AP41235 ELSPBP1-205ENST00000597519 557 ntTSL 3 BASIC5.32□□□□□ -1.56
HNF4AP41235 AL162574.1-201ENST00000615702 950 ntBASIC5.32□□□□□ -1.56
HNF4AP41235 AC126175.1-201ENST00000617041 758 ntBASIC5.32□□□□□ -1.56
HNF4AP41235 AC015908.5-201ENST00000623289 343 ntBASIC5.32□□□□□ -1.56
HNF4AP41235 AC007683.2-201ENST00000624681 714 ntBASIC5.32□□□□□ -1.56
HNF4AP41235 LINC00254-202ENST00000633813 439 ntTSL 3 BASIC5.32□□□□□ -1.56
HNF4AP41235 AC119674.1-212ENST00000641155 993 ntBASIC5.32□□□□□ -1.56
Retrieved 100 of 98,524 protein–RNA pairs in 91.8 ms