Protein–RNA interactions for Protein: P31273

HOXC8, Homeobox protein Hox-C8, humanhuman

Predictions only

Length 242 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC8P31273 AC104964.3-201ENST00000606115 2860 ntBASIC5.75□□□□□ -1.49
HOXC8P31273 MAGI2-222ENST00000636039 5671 ntTSL 5 BASIC5.75□□□□□ -1.49
HOXC8P31273 AC016745.2-201ENST00000608834 3443 ntBASIC5.75□□□□□ -1.49
HOXC8P31273 ZNF534-202ENST00000332323 2086 ntAPPRIS P4 TSL 1 (best) BASIC5.75□□□□□ -1.49
HOXC8P31273 DYNC1I2-202ENST00000397119 2604 ntTSL 1 (best) BASIC5.75□□□□□ -1.49
HOXC8P31273 OR11H1-201ENST00000252835 982 ntAPPRIS P1 BASIC5.75□□□□□ -1.49
HOXC8P31273 OR4C11-201ENST00000302231 1045 ntAPPRIS P1 BASIC5.75□□□□□ -1.49
HOXC8P31273 OR11H6-201ENST00000315519 993 ntAPPRIS P1 BASIC5.75□□□□□ -1.49
HOXC8P31273 RN7SKP103-201ENST00000363848 320 ntBASIC5.75□□□□□ -1.49
HOXC8P31273 AL035419.1-201ENST00000397037 564 ntBASIC5.75□□□□□ -1.49
HOXC8P31273 MTERF4-204ENST00000406593 802 ntTSL 2 BASIC5.75□□□□□ -1.49
HOXC8P31273 AC096559.1-201ENST00000414086 399 ntTSL 2 BASIC5.75□□□□□ -1.49
HOXC8P31273 AC098820.3-201ENST00000414135 976 ntTSL 3 BASIC5.75□□□□□ -1.49
HOXC8P31273 TRIM60P17-201ENST00000415181 719 ntBASIC5.75□□□□□ -1.49
HOXC8P31273 LINC01945-201ENST00000419784 840 ntTSL 2 BASIC5.75□□□□□ -1.49
HOXC8P31273 OR2AM1P-201ENST00000422137 422 ntBASIC5.75□□□□□ -1.49
HOXC8P31273 AL451047.1-201ENST00000424451 814 ntTSL 3 BASIC5.75□□□□□ -1.49
HOXC8P31273 AC106901.1-201ENST00000425086 698 ntBASIC5.75□□□□□ -1.49
HOXC8P31273 MGAT2P2-201ENST00000427194 797 ntBASIC5.75□□□□□ -1.49
HOXC8P31273 USP9YP9-201ENST00000429406 715 ntBASIC5.75□□□□□ -1.49
HOXC8P31273 LINC02529-201ENST00000429657 772 ntTSL 3 BASIC5.75□□□□□ -1.49
HOXC8P31273 ARAFP2-201ENST00000440565 559 ntBASIC5.75□□□□□ -1.49
HOXC8P31273 AL023584.2-201ENST00000454411 444 ntTSL 5 BASIC5.75□□□□□ -1.49
HOXC8P31273 RPL7P16-201ENST00000479738 738 ntBASIC5.75□□□□□ -1.49
HOXC8P31273 AC087071.2-201ENST00000483283 575 ntTSL 4 BASIC5.75□□□□□ -1.49
HOXC8P31273 LINC01192-206ENST00000489012 818 ntTSL 5 BASIC5.75□□□□□ -1.49
HOXC8P31273 AC138956.1-201ENST00000508187 504 ntTSL 3 BASIC5.75□□□□□ -1.49
HOXC8P31273 LINC02223-202ENST00000511596 578 ntTSL 5 BASIC5.75□□□□□ -1.49
HOXC8P31273 AC093763.1-201ENST00000512464 699 ntTSL 3 BASIC5.75□□□□□ -1.49
HOXC8P31273 SPRY4-AS1-205ENST00000514303 152 ntTSL 3 BASIC5.75□□□□□ -1.49
HOXC8P31273 RNA5SP228-201ENST00000516232 133 ntBASIC5.75□□□□□ -1.49
HOXC8P31273 OR4A6P-201ENST00000534364 970 ntBASIC5.75□□□□□ -1.49
HOXC8P31273 MIR4307HG-201ENST00000548170 822 ntTSL 3 BASIC5.75□□□□□ -1.49
HOXC8P31273 OR11H2-201ENST00000556246 948 ntAPPRIS P1 BASIC5.75□□□□□ -1.49
HOXC8P31273 RPS15A-203ENST00000563390 525 ntAPPRIS P1 TSL 1 (best) BASIC5.75□□□□□ -1.49
HOXC8P31273 C1QBP-206ENST00000574444 901 ntTSL 3 BASIC5.75□□□□□ -1.49
HOXC8P31273 MTND2P13-201ENST00000577438 1039 ntBASIC5.75□□□□□ -1.49
HOXC8P31273 SNORD39.2-201ENST00000579995 76 ntBASIC5.75□□□□□ -1.49
HOXC8P31273 AC006116.4-201ENST00000589671 452 ntTSL 2 BASIC5.75□□□□□ -1.49
HOXC8P31273 AP000873.2-201ENST00000602381 406 ntTSL 2 BASIC5.75□□□□□ -1.49
HOXC8P31273 AC022387.2-201ENST00000604050 448 ntBASIC5.75□□□□□ -1.49
HOXC8P31273 BNIP3P7-201ENST00000605641 516 ntBASIC5.75□□□□□ -1.49
HOXC8P31273 AL356608.1-201ENST00000610034 820 ntBASIC5.75□□□□□ -1.49
HOXC8P31273 KIAA1109-201ENST00000264501 15896 ntAPPRIS P1 TSL 5 BASIC5.75□□□□□ -1.49
HOXC8P31273 CCDC186-203ENST00000369287 7245 ntAPPRIS P1 TSL 1 (best) BASIC5.75□□□□□ -1.49
HOXC8P31273 SELE-205ENST00000367777 3576 ntTSL 5 BASIC5.75□□□□□ -1.49
HOXC8P31273 SNX10-202ENST00000396376 2491 ntAPPRIS P2 TSL 1 (best) BASIC5.75□□□□□ -1.49
HOXC8P31273 IRAK4-203ENST00000448290 1381 ntTSL 5 BASIC5.75□□□□□ -1.49
HOXC8P31273 CLCN5-202ENST00000376088 10108 ntTSL 2 BASIC5.75□□□□□ -1.49
HOXC8P31273 SLC30A7-203ENST00000370112 7898 ntAPPRIS P1 TSL 1 (best) BASIC5.75□□□□□ -1.49
HOXC8P31273 MYO5A-201ENST00000356338 11971 ntAPPRIS ALT1 TSL 1 (best) BASIC5.75□□□□□ -1.49
HOXC8P31273 CPA3-201ENST00000296046 1795 ntAPPRIS P1 TSL 1 (best) BASIC5.75□□□□□ -1.49
HOXC8P31273 MFSD8-216ENST00000641147 4009 ntBASIC5.75□□□□□ -1.49
HOXC8P31273 ZNF33A-202ENST00000374618 6122 ntTSL 4 BASIC5.75□□□□□ -1.49
HOXC8P31273 LARP4-203ENST00000398473 6427 ntAPPRIS P3 TSL 1 (best) BASIC5.74□□□□□ -1.49
HOXC8P31273 FAM216B-201ENST00000313851 3243 ntAPPRIS P1 TSL 1 (best) BASIC5.74□□□□□ -1.49
HOXC8P31273 CLCC1-204ENST00000369968 4151 ntTSL 5 BASIC5.74□□□□□ -1.49
HOXC8P31273 NPY6R-202ENST00000510937 2988 ntTSL 3 BASIC5.74□□□□□ -1.49
HOXC8P31273 CACNB4-243ENST00000637217 8188 ntTSL 5 BASIC5.74□□□□□ -1.49
HOXC8P31273 AC093297.3-201ENST00000607056 2517 ntBASIC5.74□□□□□ -1.49
HOXC8P31273 ZNF813-201ENST00000396403 6151 ntAPPRIS P1 TSL 3 BASIC5.74□□□□□ -1.49
HOXC8P31273 NUP37-201ENST00000251074 1203 ntAPPRIS P1 TSL 1 (best) BASIC5.74□□□□□ -1.49
HOXC8P31273 SPINK14-201ENST00000356972 294 ntAPPRIS P1 TSL 1 (best) BASIC5.74□□□□□ -1.49
HOXC8P31273 LINC01317-201ENST00000366209 779 ntTSL 5 BASIC5.74□□□□□ -1.49
HOXC8P31273 DEFB136-201ENST00000382209 237 ntAPPRIS P1 TSL 1 (best) BASIC5.74□□□□□ -1.49
HOXC8P31273 CXCL8-202ENST00000401931 700 ntAPPRIS ALT1 TSL 1 (best) BASIC5.74□□□□□ -1.49
HOXC8P31273 RN7SKP114-201ENST00000410327 279 ntBASIC5.74□□□□□ -1.49
HOXC8P31273 COX6B1P1-201ENST00000415962 213 ntBASIC5.74□□□□□ -1.49
HOXC8P31273 AL591468.1-201ENST00000417932 573 ntTSL 3 BASIC5.74□□□□□ -1.49
HOXC8P31273 AC079790.1-201ENST00000420365 507 ntTSL 3 BASIC5.74□□□□□ -1.49
HOXC8P31273 AC062021.1-201ENST00000429008 557 ntTSL 4 BASIC5.74□□□□□ -1.49
HOXC8P31273 AL591719.2-201ENST00000437400 386 ntTSL 3 BASIC5.74□□□□□ -1.49
HOXC8P31273 AC016292.1-201ENST00000438344 235 ntTSL 3 BASIC5.74□□□□□ -1.49
HOXC8P31273 AL354794.1-201ENST00000442103 516 ntTSL 3 BASIC5.74□□□□□ -1.49
HOXC8P31273 RSL24D1P2-201ENST00000445584 366 ntBASIC5.74□□□□□ -1.49
HOXC8P31273 AP003774.4-201ENST00000447028 672 ntTSL 2 BASIC5.74□□□□□ -1.49
HOXC8P31273 NOP56P2-201ENST00000447491 769 ntBASIC5.74□□□□□ -1.49
HOXC8P31273 RPL31P20-201ENST00000449593 360 ntBASIC5.74□□□□□ -1.49
HOXC8P31273 AC026316.2-201ENST00000473110 263 ntTSL 3 BASIC5.74□□□□□ -1.49
HOXC8P31273 RN7SL860P-201ENST00000473738 223 ntBASIC5.74□□□□□ -1.49
HOXC8P31273 RPS24P16-201ENST00000497294 392 ntBASIC5.74□□□□□ -1.49
HOXC8P31273 AC010425.1-201ENST00000511734 554 ntTSL 4 BASIC5.74□□□□□ -1.49
HOXC8P31273 SEPT10P1-201ENST00000517342 1162 ntBASIC5.74□□□□□ -1.49
HOXC8P31273 SEC11B-201ENST00000518383 499 ntBASIC5.74□□□□□ -1.49
HOXC8P31273 AC025437.5-201ENST00000522769 314 ntTSL 3 BASIC5.74□□□□□ -1.49
HOXC8P31273 SPINK14-202ENST00000562793 157 ntTSL 5 BASIC5.74□□□□□ -1.49
HOXC8P31273 AC027281.1-201ENST00000574178 758 ntBASIC5.74□□□□□ -1.49
HOXC8P31273 MIR4420-201ENST00000583944 77 ntBASIC5.74□□□□□ -1.49
HOXC8P31273 ZNF230-204ENST00000585632 579 ntTSL 2 BASIC5.74□□□□□ -1.49
HOXC8P31273 AC026786.2-201ENST00000606110 392 ntTSL 3 BASIC5.74□□□□□ -1.49
HOXC8P31273 AC008833.1-201ENST00000611633 691 ntBASIC5.74□□□□□ -1.49
HOXC8P31273 AC002384.2-201ENST00000636036 790 ntTSL 3 BASIC5.74□□□□□ -1.49
HOXC8P31273 AC109462.4-201ENST00000637882 581 ntTSL 5 BASIC5.74□□□□□ -1.49
HOXC8P31273 MAPK10-370ENST00000641943 4117 ntAPPRIS P2 BASIC5.74□□□□□ -1.49
HOXC8P31273 R3HDM1-204ENST00000410054 4442 ntTSL 2 BASIC5.74□□□□□ -1.49
HOXC8P31273 AC245100.4-204ENST00000635587 1555 ntTSL 5 BASIC5.74□□□□□ -1.49
HOXC8P31273 NKAIN2-204ENST00000545433 3052 ntTSL 5 BASIC5.74□□□□□ -1.49
HOXC8P31273 LINC02141-201ENST00000568279 6586 ntTSL 1 (best) BASIC5.74□□□□□ -1.49
HOXC8P31273 DMD-205ENST00000359836 7339 ntTSL 5 BASIC5.74□□□□□ -1.49
HOXC8P31273 EDA2R-202ENST00000374719 3418 ntAPPRIS P3 TSL 1 (best) BASIC5.74□□□□□ -1.49
Retrieved 100 of 98,524 protein–RNA pairs in 92.9 ms