Protein–RNA interactions for Protein: P29350

PTPN6, Tyrosine-protein phosphatase non-receptor type 6, humanhuman

Predictions only

Length 595 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN6P29350 ZNF343-207ENST00000612935 3675 ntAPPRIS ALT2 TSL 5 BASIC5.06□□□□□ -1.6
PTPN6P29350 LGALS8-222ENST00000527974 1349 ntAPPRIS P4 TSL 5 BASIC5.06□□□□□ -1.6
PTPN6P29350 AC022417.1-201ENST00000624768 1303 ntBASIC5.06□□□□□ -1.6
PTPN6P29350 NADK2-203ENST00000397338 3614 ntTSL 2 BASIC5.06□□□□□ -1.6
PTPN6P29350 MID2-202ENST00000443968 2251 ntAPPRIS P1 TSL 1 (best) BASIC5.06□□□□□ -1.6
PTPN6P29350 RN7SKP160-201ENST00000363804 340 ntBASIC5.06□□□□□ -1.6
PTPN6P29350 RNA5SP234-201ENST00000363916 119 ntBASIC5.06□□□□□ -1.6
PTPN6P29350 AC240504.1-201ENST00000395709 845 ntBASIC5.06□□□□□ -1.6
PTPN6P29350 RN7SKP16-201ENST00000410180 299 ntBASIC5.06□□□□□ -1.6
PTPN6P29350 MOBP-203ENST00000415443 577 ntAPPRIS ALT2 TSL 4 BASIC5.06□□□□□ -1.6
PTPN6P29350 KRTAP8-2P-201ENST00000440620 186 ntBASIC5.06□□□□□ -1.6
PTPN6P29350 NPM1P39-201ENST00000449818 867 ntBASIC5.06□□□□□ -1.6
PTPN6P29350 Z99916.1-201ENST00000454253 482 ntTSL 3 BASIC5.06□□□□□ -1.6
PTPN6P29350 C1DP3-201ENST00000455013 423 ntBASIC5.06□□□□□ -1.6
PTPN6P29350 RANP1-206ENST00000455094 651 ntBASIC5.06□□□□□ -1.6
PTPN6P29350 AC007000.3-201ENST00000459742 617 ntTSL 3 BASIC5.06□□□□□ -1.6
PTPN6P29350 RPL35AP19-201ENST00000469425 329 ntBASIC5.06□□□□□ -1.6
PTPN6P29350 AC092754.1-201ENST00000472975 479 ntBASIC5.06□□□□□ -1.6
PTPN6P29350 RN7SL177P-201ENST00000476596 299 ntBASIC5.06□□□□□ -1.6
PTPN6P29350 AC058823.1-201ENST00000485315 474 ntBASIC5.06□□□□□ -1.6
PTPN6P29350 CFAP44-AS1-202ENST00000498480 686 ntTSL 3 BASIC5.06□□□□□ -1.6
PTPN6P29350 AC007370.1-201ENST00000503163 316 ntTSL 2 BASIC5.06□□□□□ -1.6
PTPN6P29350 GYPA-203ENST00000503627 318 ntTSL 1 (best) BASIC5.06□□□□□ -1.6
PTPN6P29350 LINC01365-202ENST00000512219 637 ntTSL 5 BASIC5.06□□□□□ -1.6
PTPN6P29350 LINC00535-202ENST00000517785 264 ntTSL 3 BASIC5.06□□□□□ -1.6
PTPN6P29350 AC025370.1-201ENST00000523775 583 ntTSL 5 BASIC5.06□□□□□ -1.6
PTPN6P29350 AP004607.2-201ENST00000533949 322 ntBASIC5.06□□□□□ -1.6
PTPN6P29350 AC005000.1-201ENST00000536192 288 ntBASIC5.06□□□□□ -1.6
PTPN6P29350 AC090022.1-201ENST00000546569 311 ntBASIC5.06□□□□□ -1.6
PTPN6P29350 CLMN-206ENST00000556441 452 ntTSL 5 BASIC5.06□□□□□ -1.6
PTPN6P29350 AL161757.4-204ENST00000557136 834 ntTSL 3 BASIC5.06□□□□□ -1.6
PTPN6P29350 LINC00687-203ENST00000558175 696 ntTSL 3 BASIC5.06□□□□□ -1.6
PTPN6P29350 AC011468.1-201ENST00000569091 675 ntTSL 1 (best) BASIC5.06□□□□□ -1.6
PTPN6P29350 AC021549.1-201ENST00000580937 433 ntTSL 3 BASIC5.06□□□□□ -1.6
PTPN6P29350 MIR3176-201ENST00000582210 90 ntBASIC5.06□□□□□ -1.6
PTPN6P29350 AL136311.1-213ENST00000586466 520 ntTSL 5 BASIC5.06□□□□□ -1.6
PTPN6P29350 AL356580.1-201ENST00000604129 159 ntTSL 5 BASIC5.06□□□□□ -1.6
PTPN6P29350 AL160400.1-201ENST00000606385 1030 ntTSL 1 (best) BASIC5.06□□□□□ -1.6
PTPN6P29350 AC010245.2-201ENST00000606908 1167 ntBASIC5.06□□□□□ -1.6
PTPN6P29350 AC079395.2-201ENST00000610982 737 ntBASIC5.06□□□□□ -1.6
PTPN6P29350 AC022467.1-201ENST00000614738 749 ntBASIC5.06□□□□□ -1.6
PTPN6P29350 AC068631.1-223ENST00000625877 472 ntTSL 5 BASIC5.06□□□□□ -1.6
PTPN6P29350 OR5AN1-203ENST00000641998 7647 ntAPPRIS P1 BASIC5.06□□□□□ -1.6
PTPN6P29350 IGF2BP3-218ENST00000619562 2126 ntTSL 1 (best) BASIC5.06□□□□□ -1.6
PTPN6P29350 DYNC2H1-201ENST00000334267 2984 ntTSL 1 (best) BASIC5.06□□□□□ -1.6
PTPN6P29350 CD80-204ENST00000478182 1491 ntAPPRIS P1 TSL 1 (best) BASIC5.06□□□□□ -1.6
PTPN6P29350 AC093591.2-201ENST00000565254 3843 ntBASIC5.06□□□□□ -1.6
PTPN6P29350 PPP1R2P3-201ENST00000522232 1991 ntAPPRIS P1 BASIC5.05□□□□□ -1.6
PTPN6P29350 ACSL5-204ENST00000393081 3380 ntAPPRIS P1 TSL 5 BASIC5.05□□□□□ -1.6
PTPN6P29350 ZFP14-201ENST00000270001 7489 ntAPPRIS P1 TSL 1 (best) BASIC5.05□□□□□ -1.6
PTPN6P29350 DLGAP1-AS2-202ENST00000573177 1388 ntBASIC5.05□□□□□ -1.6
PTPN6P29350 RXFP1-206ENST00000460056 2735 ntTSL 2 BASIC5.05□□□□□ -1.6
PTPN6P29350 C4orf17-201ENST00000326581 1636 ntAPPRIS P2 TSL 1 (best) BASIC5.05□□□□□ -1.6
PTPN6P29350 ZNF33A-201ENST00000307441 6196 ntAPPRIS ALT2 TSL 4 BASIC5.05□□□□□ -1.6
PTPN6P29350 PLCH1-AS1-201ENST00000475196 1308 ntTSL 1 (best) BASIC5.05□□□□□ -1.6
PTPN6P29350 RGS4-202ENST00000367908 2606 ntTSL 2 BASIC5.05□□□□□ -1.6
PTPN6P29350 VPS13C-204ENST00000395898 11012 ntAPPRIS ALT2 TSL 1 (best) BASIC5.05□□□□□ -1.6
PTPN6P29350 SAMD9L-204ENST00000437805 5757 ntAPPRIS P1 TSL 1 (best) BASIC5.05□□□□□ -1.6
PTPN6P29350 WDR12-201ENST00000261015 8100 ntAPPRIS P1 TSL 1 (best) BASIC5.05□□□□□ -1.6
PTPN6P29350 ETV1-207ENST00000405358 4181 ntTSL 5 BASIC5.05□□□□□ -1.6
PTPN6P29350 CKAP5-202ENST00000354558 6428 ntTSL 1 (best) BASIC5.05□□□□□ -1.6
PTPN6P29350 OR9K1P-201ENST00000326513 941 ntBASIC5.05□□□□□ -1.6
PTPN6P29350 MAX-203ENST00000341653 330 ntTSL 2 BASIC5.05□□□□□ -1.6
PTPN6P29350 RNU6-386P-201ENST00000362650 107 ntBASIC5.05□□□□□ -1.6
PTPN6P29350 RNA5SP319-201ENST00000362768 119 ntBASIC5.05□□□□□ -1.6
PTPN6P29350 RNU1-19P-201ENST00000363306 165 ntBASIC5.05□□□□□ -1.6
PTPN6P29350 SSX1-201ENST00000376919 1298 ntAPPRIS P1 TSL 1 (best) BASIC5.05□□□□□ -1.6
PTPN6P29350 RNU6-891P-201ENST00000384280 111 ntBASIC5.05□□□□□ -1.6
PTPN6P29350 AL391361.1-201ENST00000405580 489 ntBASIC5.05□□□□□ -1.6
PTPN6P29350 SNORA11B-201ENST00000408175 129 ntBASIC5.05□□□□□ -1.6
PTPN6P29350 GABARAPL3-201ENST00000412799 354 ntBASIC5.05□□□□□ -1.6
PTPN6P29350 MARK2P12-201ENST00000420129 585 ntBASIC5.05□□□□□ -1.6
PTPN6P29350 SRSF1P1-201ENST00000424058 520 ntBASIC5.05□□□□□ -1.6
PTPN6P29350 ARPP21-215ENST00000432682 1015 ntTSL 5 BASIC5.05□□□□□ -1.6
PTPN6P29350 AC046176.1-201ENST00000435260 1170 ntBASIC5.05□□□□□ -1.6
PTPN6P29350 VAV3-AS1-201ENST00000438318 619 ntTSL 2 BASIC5.05□□□□□ -1.6
PTPN6P29350 AC004994.1-201ENST00000447057 313 ntTSL 3 BASIC5.05□□□□□ -1.6
PTPN6P29350 AL591623.2-201ENST00000449978 222 ntBASIC5.05□□□□□ -1.6
PTPN6P29350 AL672138.1-201ENST00000450604 1015 ntBASIC5.05□□□□□ -1.6
PTPN6P29350 AL133244.1-201ENST00000456007 258 ntBASIC5.05□□□□□ -1.6
PTPN6P29350 TRAPPC2-204ENST00000458511 678 ntTSL 5 BASIC5.05□□□□□ -1.6
PTPN6P29350 AC100832.1-201ENST00000471945 383 ntBASIC5.05□□□□□ -1.6
PTPN6P29350 EIF1P7-201ENST00000487533 337 ntBASIC5.05□□□□□ -1.6
PTPN6P29350 RN7SL184P-201ENST00000488308 297 ntBASIC5.05□□□□□ -1.6
PTPN6P29350 AL049874.2-201ENST00000492636 288 ntBASIC5.05□□□□□ -1.6
PTPN6P29350 RPS4XP14-201ENST00000493072 781 ntBASIC5.05□□□□□ -1.6
PTPN6P29350 AC108693.1-201ENST00000496068 432 ntBASIC5.05□□□□□ -1.6
PTPN6P29350 MYL12BP2-201ENST00000503948 512 ntBASIC5.05□□□□□ -1.6
PTPN6P29350 EIF4E-204ENST00000504432 1132 ntTSL 5 BASIC5.05□□□□□ -1.6
PTPN6P29350 AC079226.2-201ENST00000509283 518 ntTSL 2 BASIC5.05□□□□□ -1.6
PTPN6P29350 ZCCHC10-210ENST00000513848 876 ntAPPRIS ALT2 TSL 2 BASIC5.05□□□□□ -1.6
PTPN6P29350 AC022360.1-201ENST00000521058 340 ntBASIC5.05□□□□□ -1.6
PTPN6P29350 AC100784.1-201ENST00000522790 310 ntBASIC5.05□□□□□ -1.6
PTPN6P29350 IGHVIII-67-4-201ENST00000524281 296 ntBASIC5.05□□□□□ -1.6
PTPN6P29350 AP001266.2-201ENST00000534505 464 ntTSL 4 BASIC5.05□□□□□ -1.6
PTPN6P29350 AC079414.1-201ENST00000563114 488 ntTSL 1 (best) BASIC5.05□□□□□ -1.6
PTPN6P29350 AC022884.2-201ENST00000578535 580 ntBASIC5.05□□□□□ -1.6
PTPN6P29350 NPM1P45-201ENST00000583151 559 ntBASIC5.05□□□□□ -1.6
PTPN6P29350 AP005131.3-201ENST00000590042 665 ntTSL 3 BASIC5.05□□□□□ -1.6
PTPN6P29350 AC007204.2-201ENST00000615022 616 ntBASIC5.05□□□□□ -1.6
Retrieved 100 of 98,524 protein–RNA pairs in 113.9 ms