Protein–RNA interactions for Protein: P28702

RXRB, Retinoic acid receptor RXR-beta, humanhuman

Predictions only

Length 533 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RXRBP28702 AC021146.8-201ENST00000507455 733 ntBASIC7.74□□□□□ -1.17
RXRBP28702 AC010451.1-201ENST00000509057 556 ntTSL 3 BASIC7.74□□□□□ -1.17
RXRBP28702 LINC01217-201ENST00000514427 562 ntTSL 4 BASIC7.74□□□□□ -1.17
RXRBP28702 AC108467.1-201ENST00000515623 672 ntTSL 3 BASIC7.74□□□□□ -1.17
RXRBP28702 C1GALT1P3-201ENST00000522049 819 ntBASIC7.74□□□□□ -1.17
RXRBP28702 HMGB1P1-201ENST00000522557 636 ntBASIC7.74□□□□□ -1.17
RXRBP28702 AC104009.1-203ENST00000531304 571 ntTSL 4 BASIC7.74□□□□□ -1.17
RXRBP28702 TAS2R46-201ENST00000533467 930 ntAPPRIS P1 BASIC7.74□□□□□ -1.17
RXRBP28702 C1GALT1P1-201ENST00000548895 1089 ntBASIC7.74□□□□□ -1.17
RXRBP28702 LINC01491-201ENST00000558434 505 ntTSL 3 BASIC7.74□□□□□ -1.17
RXRBP28702 AC005692.2-201ENST00000566521 596 ntTSL 3 BASIC7.74□□□□□ -1.17
RXRBP28702 AC009962.1-201ENST00000567327 3813 ntBASIC7.74□□□□□ -1.17
RXRBP28702 AC209154.1-201ENST00000582156 337 ntBASIC7.74□□□□□ -1.17
RXRBP28702 AC008109.1-201ENST00000583163 826 ntTSL 2 BASIC7.74□□□□□ -1.17
RXRBP28702 VIS1.1-201ENST00000610517 203 ntBASIC7.74□□□□□ -1.17
RXRBP28702 VN1R74P-201ENST00000613259 503 ntBASIC7.74□□□□□ -1.17
RXRBP28702 AL645927.2-201ENST00000618350 349 ntBASIC7.74□□□□□ -1.17
RXRBP28702 U6.42-201ENST00000618440 107 ntBASIC7.74□□□□□ -1.17
RXRBP28702 RNU6-368P-201ENST00000620928 107 ntBASIC7.74□□□□□ -1.17
RXRBP28702 RNU6-538P-201ENST00000622329 107 ntBASIC7.74□□□□□ -1.17
RXRBP28702 AP003072.4-201ENST00000624580 310 ntBASIC7.74□□□□□ -1.17
RXRBP28702 AC004160.1-201ENST00000625468 929 ntTSL 5 BASIC7.74□□□□□ -1.17
RXRBP28702 ZNF329-201ENST00000358067 3290 ntAPPRIS P1 TSL 2 BASIC7.74□□□□□ -1.17
RXRBP28702 AC104454.1-201ENST00000421341 1401 ntBASIC7.74□□□□□ -1.17
RXRBP28702 AC089984.1-201ENST00000552780 1431 ntTSL 3 BASIC7.74□□□□□ -1.17
RXRBP28702 ZFAND6-213ENST00000559835 1446 ntAPPRIS P1 TSL 1 (best) BASIC7.74□□□□□ -1.17
RXRBP28702 AC087516.1-201ENST00000561236 2428 ntBASIC7.74□□□□□ -1.17
RXRBP28702 TRPM7-201ENST00000313478 10400 ntAPPRIS P3 TSL 1 (best) BASIC7.74□□□□□ -1.17
RXRBP28702 NRXN1-211ENST00000406859 2553 ntTSL 5 BASIC7.74□□□□□ -1.17
RXRBP28702 SNRPB2-202ENST00000377943 1588 ntAPPRIS P1 TSL 1 (best) BASIC7.74□□□□□ -1.17
RXRBP28702 PIGN-207ENST00000586566 3891 ntTSL 5 BASIC7.74□□□□□ -1.17
RXRBP28702 PSG1-202ENST00000312439 1882 ntAPPRIS ALT2 TSL 1 (best) BASIC7.74□□□□□ -1.17
RXRBP28702 NOX4-211ENST00000528341 1899 ntTSL 2 BASIC7.74□□□□□ -1.17
RXRBP28702 AMOT-206ENST00000524145 3330 ntAPPRIS ALT2 TSL 5 BASIC7.74□□□□□ -1.17
RXRBP28702 EFNA5-206ENST00000611503 4933 ntTSL 5 BASIC7.74□□□□□ -1.17
RXRBP28702 ETV1-210ENST00000430479 6740 ntAPPRIS P1 TSL 1 (best) BASIC7.74□□□□□ -1.17
RXRBP28702 ZNF876P-202ENST00000398732 1485 ntBASIC7.74□□□□□ -1.17
RXRBP28702 TINAG-201ENST00000259782 1754 ntAPPRIS P1 TSL 1 (best) BASIC7.74□□□□□ -1.17
RXRBP28702 USP9X-201ENST00000324545 12401 ntTSL 5 BASIC7.74□□□□□ -1.17
RXRBP28702 MID1-209ENST00000453318 6393 ntAPPRIS P1 TSL 5 BASIC7.74□□□□□ -1.17
RXRBP28702 LINC02532-208ENST00000602621 2232 ntTSL 2 BASIC7.74□□□□□ -1.17
RXRBP28702 ABI1-207ENST00000376142 3576 ntTSL 1 (best) BASIC7.74□□□□□ -1.17
RXRBP28702 RBMXL1-201ENST00000321792 4799 ntAPPRIS P1 TSL 1 (best) BASIC7.74□□□□□ -1.17
RXRBP28702 CLCC1-203ENST00000356970 4803 ntAPPRIS ALT2 TSL 5 BASIC7.73□□□□□ -1.17
RXRBP28702 IFIT1B-201ENST00000371809 1972 ntAPPRIS P1 TSL 1 (best) BASIC7.73□□□□□ -1.17
RXRBP28702 MAPK6-201ENST00000261845 5345 ntAPPRIS P1 TSL 1 (best) BASIC7.73□□□□□ -1.17
RXRBP28702 LINC00861-201ENST00000500989 5330 ntTSL 1 (best) BASIC7.73□□□□□ -1.17
RXRBP28702 FO082842.1-201ENST00000423552 1370 ntBASIC7.73□□□□□ -1.17
RXRBP28702 BTN3A2-203ENST00000396934 3672 ntAPPRIS ALT2 TSL 2 BASIC7.73□□□□□ -1.17
RXRBP28702 LINC00624-201ENST00000619867 3088 ntTSL 1 (best) BASIC7.73□□□□□ -1.17
RXRBP28702 ZNF385B-201ENST00000336917 2610 ntTSL 5 BASIC7.73□□□□□ -1.17
RXRBP28702 CNTNAP4-206ENST00000478060 3708 ntTSL 5 BASIC7.73□□□□□ -1.17
RXRBP28702 NAV3-202ENST00000536525 7386 ntAPPRIS P1 TSL 1 (best) BASIC7.73□□□□□ -1.17
RXRBP28702 TPMT-201ENST00000309983 3181 ntAPPRIS P1 TSL 1 (best) BASIC7.73□□□□□ -1.17
RXRBP28702 FAM227A-205ENST00000535113 10322 ntAPPRIS ALT2 TSL 5 BASIC7.73□□□□□ -1.17
RXRBP28702 AC234772.1-201ENST00000377927 937 ntBASIC7.73□□□□□ -1.17
RXRBP28702 PPP3R1-203ENST00000409752 851 ntTSL 3 BASIC7.73□□□□□ -1.17
RXRBP28702 KCNJ13-202ENST00000409779 1099 ntTSL 2 BASIC7.73□□□□□ -1.17
RXRBP28702 AL590139.1-201ENST00000416267 400 ntBASIC7.73□□□□□ -1.17
RXRBP28702 P2RY10P2-201ENST00000416730 913 ntBASIC7.73□□□□□ -1.17
RXRBP28702 AC016831.2-201ENST00000417179 352 ntBASIC7.73□□□□□ -1.17
RXRBP28702 FRMPD4-AS1-201ENST00000425057 285 ntTSL 3 BASIC7.73□□□□□ -1.17
RXRBP28702 RPS7P2-201ENST00000435134 607 ntBASIC7.73□□□□□ -1.17
RXRBP28702 MTCO2P16-201ENST00000436962 677 ntBASIC7.73□□□□□ -1.17
RXRBP28702 AC093639.1-201ENST00000441026 473 ntTSL 2 BASIC7.73□□□□□ -1.17
RXRBP28702 AL360091.1-201ENST00000447949 496 ntTSL 5 BASIC7.73□□□□□ -1.17
RXRBP28702 HMGB1P26-201ENST00000452520 628 ntBASIC7.73□□□□□ -1.17
RXRBP28702 FABP5P12-201ENST00000515543 389 ntBASIC7.73□□□□□ -1.17
RXRBP28702 AC096577.1-202ENST00000515649 448 ntTSL 3 BASIC7.73□□□□□ -1.17
RXRBP28702 AC021678.3-201ENST00000517893 476 ntBASIC7.73□□□□□ -1.17
RXRBP28702 TEK-204ENST00000519097 3836 ntTSL 2 BASIC7.73□□□□□ -1.17
RXRBP28702 IGKV2D-10-201ENST00000520194 281 ntBASIC7.73□□□□□ -1.17
RXRBP28702 AC013701.1-201ENST00000522657 465 ntBASIC7.73□□□□□ -1.17
RXRBP28702 IGLV3-6-201ENST00000523937 250 ntBASIC7.73□□□□□ -1.17
RXRBP28702 OR7E10P-201ENST00000526420 991 ntBASIC7.73□□□□□ -1.17
RXRBP28702 PRB1-204ENST00000546254 1170 ntAPPRIS ALT2 TSL 5 BASIC7.73□□□□□ -1.17
RXRBP28702 AC135628.1-201ENST00000568867 534 ntBASIC7.73□□□□□ -1.17
RXRBP28702 MIR7515HG-243ENST00000591400 1067 ntTSL 5 BASIC7.73□□□□□ -1.17
RXRBP28702 AC011451.2-201ENST00000604303 598 ntBASIC7.73□□□□□ -1.17
RXRBP28702 HIRAP1-201ENST00000605318 787 ntBASIC7.73□□□□□ -1.17
RXRBP28702 Metazoa_SRP.43-201ENST00000616394 271 ntBASIC7.73□□□□□ -1.17
RXRBP28702 AC023490.1-202ENST00000620909 820 ntTSL 5 BASIC7.73□□□□□ -1.17
RXRBP28702 AL928596.1-201ENST00000636738 632 ntTSL 2 BASIC7.73□□□□□ -1.17
RXRBP28702 AC013470.2-206ENST00000636804 771 ntAPPRIS P5 TSL 5 BASIC7.73□□□□□ -1.17
RXRBP28702 NDRG3-203ENST00000373773 2098 ntTSL 1 (best) BASIC7.73□□□□□ -1.17
RXRBP28702 GOLGA6L22-204ENST00000622895 4178 ntAPPRIS P5 TSL 5 BASIC7.73□□□□□ -1.17
RXRBP28702 PPP2R3A-201ENST00000264977 6795 ntAPPRIS P1 TSL 1 (best) BASIC7.73□□□□□ -1.17
RXRBP28702 OR2G6-202ENST00000641501 5840 ntAPPRIS P1 BASIC7.73□□□□□ -1.17
RXRBP28702 PSD3-218ENST00000523619 8145 ntAPPRIS ALT2 TSL 1 (best) BASIC7.73□□□□□ -1.17
RXRBP28702 AC005821.1-203ENST00000577270 3145 ntTSL 1 (best) BASIC7.73□□□□□ -1.17
RXRBP28702 SLC10A5P1-201ENST00000379063 1306 ntBASIC7.73□□□□□ -1.17
RXRBP28702 KIAA1210-201ENST00000402510 7824 ntAPPRIS P1 TSL 5 BASIC7.73□□□□□ -1.17
RXRBP28702 AL627309.5-201ENST00000484859 4860 ntTSL 5 BASIC7.73□□□□□ -1.17
RXRBP28702 PBX1-221ENST00000612123 6062 ntTSL 5 BASIC7.73□□□□□ -1.17
RXRBP28702 ARL17A-202ENST00000336125 3945 ntAPPRIS P4 TSL 1 (best) BASIC7.72□□□□□ -1.17
RXRBP28702 ETV1-201ENST00000242066 6348 ntTSL 5 BASIC7.72□□□□□ -1.17
RXRBP28702 GTF2IP4-201ENST00000453092 2054 ntBASIC7.72□□□□□ -1.17
RXRBP28702 DCUN1D1-208ENST00000632685 3147 ntTSL 1 (best) BASIC7.72□□□□□ -1.17
RXRBP28702 POMP-202ENST00000460403 1428 ntTSL 3 BASIC7.72□□□□□ -1.17
RXRBP28702 FOXJ3-203ENST00000372571 4468 ntTSL 2 BASIC7.72□□□□□ -1.17
Retrieved 100 of 98,524 protein–RNA pairs in 116.5 ms