Protein–RNA interactions for Protein: P23025

XPA, DNA repair protein complementing XP-A cells, humanhuman

Predicted RBP Predictions only

Length 273 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
XPAP23025 AC133065.1-201ENST00000572017 575 ntTSL 3 BASIC6.11□□□□□ -1.43
XPAP23025 AC139099.3-202ENST00000574856 439 ntTSL 2 BASIC6.11□□□□□ -1.43
XPAP23025 STARD6-202ENST00000577499 696 ntTSL 2 BASIC6.11□□□□□ -1.43
XPAP23025 AC100844.1-201ENST00000580622 440 ntTSL 5 BASIC6.11□□□□□ -1.43
XPAP23025 AC008109.1-201ENST00000583163 826 ntTSL 2 BASIC6.11□□□□□ -1.43
XPAP23025 AP005057.1-201ENST00000583827 574 ntTSL 4 BASIC6.11□□□□□ -1.43
XPAP23025 AC090236.2-201ENST00000587933 1101 ntBASIC6.11□□□□□ -1.43
XPAP23025 AC110760.3-201ENST00000598794 467 ntBASIC6.11□□□□□ -1.43
XPAP23025 Z99497.2-201ENST00000603634 310 ntBASIC6.11□□□□□ -1.43
XPAP23025 LSM1P2-201ENST00000604911 322 ntBASIC6.11□□□□□ -1.43
XPAP23025 CDC37L1-AS1-202ENST00000609131 235 ntTSL 2 BASIC6.11□□□□□ -1.43
XPAP23025 AL138478.1-201ENST00000612252 832 ntBASIC6.11□□□□□ -1.43
XPAP23025 AC092683.1-207ENST00000620051 837 ntTSL 2 BASIC6.11□□□□□ -1.43
XPAP23025 AP000676.3-201ENST00000623299 569 ntBASIC6.11□□□□□ -1.43
XPAP23025 AC245427.3-201ENST00000632041 51 ntAPPRIS P1 BASIC6.11□□□□□ -1.43
XPAP23025 AL355306.2-208ENST00000634868 1251 ntTSL 5 BASIC6.11□□□□□ -1.43
XPAP23025 AL360014.1-201ENST00000562922 2084 ntTSL 3 BASIC6.11□□□□□ -1.43
XPAP23025 AL050403.1-201ENST00000448859 2006 ntTSL 1 (best) BASIC6.11□□□□□ -1.43
XPAP23025 AC138409.2-201ENST00000514048 5001 ntTSL 5 BASIC6.11□□□□□ -1.43
XPAP23025 RYR3-209ENST00000634418 15078 ntAPPRIS ALT2 TSL 5 BASIC6.11□□□□□ -1.43
XPAP23025 DDAH1-204ENST00000535924 3909 ntTSL 1 (best) BASIC6.11□□□□□ -1.43
XPAP23025 CLEC1A-204ENST00000457018 1686 ntAPPRIS ALT2 TSL 2 BASIC6.1□□□□□ -1.43
XPAP23025 ZNF440-201ENST00000304060 4189 ntAPPRIS P1 TSL 1 (best) BASIC6.1□□□□□ -1.43
XPAP23025 NDUFS1-205ENST00000449699 2371 ntAPPRIS P1 TSL 2 BASIC6.1□□□□□ -1.43
XPAP23025 PMFBP1-207ENST00000537465 3935 ntAPPRIS ALT2 TSL 2 BASIC6.1□□□□□ -1.43
XPAP23025 STEAP2-205ENST00000394629 2261 ntTSL 1 (best) BASIC6.1□□□□□ -1.43
XPAP23025 AC087516.2-201ENST00000558963 3042 ntTSL 3 BASIC6.1□□□□□ -1.43
XPAP23025 AC239868.2-201ENST00000564237 4527 ntBASIC6.1□□□□□ -1.43
XPAP23025 RASSF8-213ENST00000542865 2219 ntAPPRIS P1 TSL 2 BASIC6.1□□□□□ -1.43
XPAP23025 NR2C2-213ENST00000617312 8113 ntTSL 1 (best) BASIC6.1□□□□□ -1.43
XPAP23025 PHYHIPL-201ENST00000373878 3569 ntTSL 1 (best) BASIC6.1□□□□□ -1.43
XPAP23025 LRRK2-201ENST00000298910 9158 ntAPPRIS P1 TSL 1 (best) BASIC6.1□□□□□ -1.43
XPAP23025 NBPF14-211ENST00000621070 2701 ntTSL 5 BASIC6.1□□□□□ -1.43
XPAP23025 ZNF146-201ENST00000443387 3326 ntAPPRIS P1 TSL 1 (best) BASIC6.1□□□□□ -1.43
XPAP23025 DEFB112-201ENST00000322246 342 ntAPPRIS P1 TSL 1 (best) BASIC6.1□□□□□ -1.43
XPAP23025 SNORD65C-201ENST00000390962 71 ntBASIC6.1□□□□□ -1.43
XPAP23025 AL034403.1-201ENST00000399414 885 ntBASIC6.1□□□□□ -1.43
XPAP23025 AL138733.1-201ENST00000415477 853 ntTSL 5 BASIC6.1□□□□□ -1.43
XPAP23025 AL162430.2-201ENST00000422306 435 ntTSL 3 BASIC6.1□□□□□ -1.43
XPAP23025 REREP1Y-201ENST00000422655 198 ntBASIC6.1□□□□□ -1.43
XPAP23025 AL078590.2-202ENST00000422736 568 ntTSL 3 BASIC6.1□□□□□ -1.43
XPAP23025 AC005165.1-203ENST00000423689 1281 ntTSL 3 BASIC6.1□□□□□ -1.43
XPAP23025 REREP2Y-201ENST00000439103 200 ntBASIC6.1□□□□□ -1.43
XPAP23025 AC026320.1-202ENST00000444729 672 ntTSL 3 BASIC6.1□□□□□ -1.43
XPAP23025 RNF148-202ENST00000447240 839 ntTSL 2 BASIC6.1□□□□□ -1.43
XPAP23025 AC005077.1-201ENST00000449226 375 ntBASIC6.1□□□□□ -1.43
XPAP23025 RPL23AP60-201ENST00000450011 454 ntBASIC6.1□□□□□ -1.43
XPAP23025 PPP1R11P1-201ENST00000486095 376 ntBASIC6.1□□□□□ -1.43
XPAP23025 AC025458.1-201ENST00000506046 166 ntBASIC6.1□□□□□ -1.43
XPAP23025 LINC00603-201ENST00000507027 733 ntTSL 5 BASIC6.1□□□□□ -1.43
XPAP23025 AC034244.1-201ENST00000507687 207 ntBASIC6.1□□□□□ -1.43
XPAP23025 AC097534.1-201ENST00000507803 521 ntTSL 4 BASIC6.1□□□□□ -1.43
XPAP23025 AC010260.1-201ENST00000511484 664 ntTSL 3 BASIC6.1□□□□□ -1.43
XPAP23025 SNORA3.4-201ENST00000515969 96 ntBASIC6.1□□□□□ -1.43
XPAP23025 RNA5SP340-201ENST00000517132 107 ntBASIC6.1□□□□□ -1.43
XPAP23025 WBP1LP3-201ENST00000523033 208 ntBASIC6.1□□□□□ -1.43
XPAP23025 AC103726.2-201ENST00000523318 411 ntTSL 2 BASIC6.1□□□□□ -1.43
XPAP23025 AP001646.3-201ENST00000526305 446 ntTSL 2 BASIC6.1□□□□□ -1.43
XPAP23025 OR6M2P-201ENST00000529831 871 ntBASIC6.1□□□□□ -1.43
XPAP23025 AC006518.2-201ENST00000542513 940 ntBASIC6.1□□□□□ -1.43
XPAP23025 LINC02170-201ENST00000561519 555 ntTSL 4 BASIC6.1□□□□□ -1.43
XPAP23025 GARSP1-201ENST00000570895 719 ntBASIC6.1□□□□□ -1.43
XPAP23025 AC006270.1-201ENST00000582889 478 ntTSL 3 BASIC6.1□□□□□ -1.43
XPAP23025 AC015688.2-201ENST00000584523 262 ntBASIC6.1□□□□□ -1.43
XPAP23025 AC010127.1-205ENST00000595268 567 ntTSL 5 BASIC6.1□□□□□ -1.43
XPAP23025 TEX41-218ENST00000596540 882 ntTSL 5 BASIC6.1□□□□□ -1.43
XPAP23025 AL161896.1-201ENST00000597248 508 ntTSL 4 BASIC6.1□□□□□ -1.43
XPAP23025 AL451086.1-201ENST00000605596 223 ntBASIC6.1□□□□□ -1.43
XPAP23025 AL589740.1-208ENST00000606913 812 ntTSL 5 BASIC6.1□□□□□ -1.43
XPAP23025 AC096586.1-201ENST00000610267 561 ntBASIC6.1□□□□□ -1.43
XPAP23025 AC096861.1-201ENST00000616652 240 ntBASIC6.1□□□□□ -1.43
XPAP23025 AL121890.3-201ENST00000618494 516 ntBASIC6.1□□□□□ -1.43
XPAP23025 SSX4B-202ENST00000619890 1092 ntTSL 5 BASIC6.1□□□□□ -1.43
XPAP23025 SSX4-202ENST00000620320 1092 ntTSL 5 BASIC6.1□□□□□ -1.43
XPAP23025 AC079298.3-203ENST00000623269 555 ntTSL 3 BASIC6.1□□□□□ -1.43
XPAP23025 MIR325HG-208ENST00000630388 1043 ntTSL 1 (best) BASIC6.1□□□□□ -1.43
XPAP23025 LINC01359-206ENST00000634775 888 ntTSL 5 BASIC6.1□□□□□ -1.43
XPAP23025 CCDC195-201ENST00000638102 606 ntAPPRIS P1 TSL 5 BASIC6.1□□□□□ -1.43
XPAP23025 LINC02183-201ENST00000637822 1732 ntTSL 5 BASIC6.1□□□□□ -1.43
XPAP23025 PROX1-205ENST00000498508 8498 ntAPPRIS P1 TSL 1 (best) BASIC6.1□□□□□ -1.43
XPAP23025 NXPE4-202ENST00000424261 1687 ntTSL 1 (best) BASIC6.1□□□□□ -1.43
XPAP23025 NLN-202ENST00000502464 8354 ntTSL 5 BASIC6.1□□□□□ -1.43
XPAP23025 GABRA3-204ENST00000535043 1697 ntAPPRIS P1 TSL 1 (best) BASIC6.1□□□□□ -1.43
XPAP23025 CPXCR1-201ENST00000276127 1630 ntAPPRIS P1 TSL 1 (best) BASIC6.1□□□□□ -1.43
XPAP23025 Z95114.1-201ENST00000624264 14574 ntBASIC6.1□□□□□ -1.43
XPAP23025 RNF145-206ENST00000519865 3478 ntAPPRIS P1 TSL 5 BASIC6.09□□□□□ -1.43
XPAP23025 CBLB-205ENST00000407712 1493 ntTSL 2 BASIC6.09□□□□□ -1.43
XPAP23025 CYP2C8-201ENST00000371270 1923 ntAPPRIS P1 TSL 1 (best) BASIC6.09□□□□□ -1.43
XPAP23025 BMPR1B-202ENST00000394931 1922 ntAPPRIS P1 TSL 1 (best) BASIC6.09□□□□□ -1.43
XPAP23025 PSG5-210ENST00000599812 1884 ntAPPRIS P1 TSL 1 (best) BASIC6.09□□□□□ -1.43
XPAP23025 RNF213-204ENST00000508628 17730 ntAPPRIS ALT2 TSL 5 BASIC6.09□□□□□ -1.43
XPAP23025 FSHR-202ENST00000406846 2784 ntAPPRIS P4 TSL 1 (best) BASIC6.09□□□□□ -1.43
XPAP23025 PKIB-207ENST00000392491 1379 ntAPPRIS P1 TSL 1 (best) BASIC6.09□□□□□ -1.43
XPAP23025 AL365214.2-201ENST00000433684 1365 ntTSL 2 BASIC6.09□□□□□ -1.43
XPAP23025 GNL2P1-201ENST00000451274 2190 ntBASIC6.09□□□□□ -1.43
XPAP23025 MEF2C-225ENST00000625585 3467 ntAPPRIS ALT1 TSL 5 BASIC6.09□□□□□ -1.43
XPAP23025 KTN1-223ENST00000555573 1712 ntTSL 2 BASIC6.09□□□□□ -1.43
XPAP23025 ECHDC1-222ENST00000531967 2585 ntAPPRIS ALT2 TSL 2 BASIC6.09□□□□□ -1.43
XPAP23025 RPL6-201ENST00000202773 947 ntAPPRIS P1 TSL 1 (best) BASIC6.09□□□□□ -1.43
XPAP23025 OR7G2-201ENST00000305456 1038 ntAPPRIS P2 BASIC6.09□□□□□ -1.43
Retrieved 100 of 98,524 protein–RNA pairs in 71.7 ms