Protein–RNA interactions for Protein: P02462

COL4A1, Collagen alpha-1(IV) chain, humanhuman

Predictions only

Length 1,669 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A1P02462 KRTAP21-3-201ENST00000444335 253 ntAPPRIS P1 BASIC5.95□□□□□ -1.46
COL4A1P02462 RPS23P7-201ENST00000466210 444 ntBASIC5.95□□□□□ -1.46
COL4A1P02462 AF117829.1-210ENST00000523859 696 ntTSL 3 BASIC5.95□□□□□ -1.46
COL4A1P02462 AC087783.1-201ENST00000527135 564 ntTSL 4 BASIC5.95□□□□□ -1.46
COL4A1P02462 AC079089.1-204ENST00000530194 572 ntTSL 2 BASIC5.95□□□□□ -1.46
COL4A1P02462 AP005436.3-201ENST00000532849 572 ntTSL 5 BASIC5.95□□□□□ -1.46
COL4A1P02462 TVP23CP2-201ENST00000571473 623 ntBASIC5.95□□□□□ -1.46
COL4A1P02462 AC008782.1-201ENST00000603386 430 ntBASIC5.95□□□□□ -1.46
COL4A1P02462 AC019193.2-201ENST00000610012 634 ntBASIC5.95□□□□□ -1.46
COL4A1P02462 AC021106.3-201ENST00000623925 531 ntBASIC5.95□□□□□ -1.46
COL4A1P02462 CCDC195-201ENST00000638102 606 ntAPPRIS P1 TSL 5 BASIC5.95□□□□□ -1.46
COL4A1P02462 AL033543.1-201ENST00000623440 13454 ntBASIC5.95□□□□□ -1.46
COL4A1P02462 LYVE1-201ENST00000256178 3273 ntAPPRIS P1 TSL 1 (best) BASIC5.95□□□□□ -1.46
COL4A1P02462 ARHGAP24-201ENST00000264343 4572 ntTSL 1 (best) BASIC5.95□□□□□ -1.46
COL4A1P02462 LHX9-201ENST00000367387 7836 ntAPPRIS P3 TSL 1 (best) BASIC5.95□□□□□ -1.46
COL4A1P02462 SMG1P6-201ENST00000532337 2930 ntBASIC5.95□□□□□ -1.46
COL4A1P02462 PDE4B-201ENST00000329654 3998 ntTSL 1 (best) BASIC5.95□□□□□ -1.46
COL4A1P02462 SREK1-203ENST00000380918 2433 ntTSL 1 (best) BASIC5.95□□□□□ -1.46
COL4A1P02462 DDX20-202ENST00000475700 4332 ntTSL 2 BASIC5.95□□□□□ -1.46
COL4A1P02462 CCNYL2-202ENST00000637719 3311 ntTSL 2 BASIC5.95□□□□□ -1.46
COL4A1P02462 PSMD10-204ENST00000361815 768 ntTSL 1 (best) BASIC5.94□□□□□ -1.46
COL4A1P02462 RNA5SP453-201ENST00000362503 119 ntBASIC5.94□□□□□ -1.46
COL4A1P02462 ARL4AP5-201ENST00000404372 599 ntBASIC5.94□□□□□ -1.46
COL4A1P02462 AL356967.1-201ENST00000406305 431 ntBASIC5.94□□□□□ -1.46
COL4A1P02462 AL592293.2-201ENST00000422292 996 ntBASIC5.94□□□□□ -1.46
COL4A1P02462 LINC01934-202ENST00000424170 686 ntTSL 4 BASIC5.94□□□□□ -1.46
COL4A1P02462 CENPIP1-201ENST00000425713 902 ntBASIC5.94□□□□□ -1.46
COL4A1P02462 AL354863.1-204ENST00000436430 556 ntTSL 3 BASIC5.94□□□□□ -1.46
COL4A1P02462 AL034380.1-201ENST00000448791 306 ntTSL 3 BASIC5.94□□□□□ -1.46
COL4A1P02462 GAPDHP14-201ENST00000450472 937 ntBASIC5.94□□□□□ -1.46
COL4A1P02462 LINC02215-201ENST00000503320 543 ntTSL 4 BASIC5.94□□□□□ -1.46
COL4A1P02462 AC083829.1-201ENST00000503756 657 ntBASIC5.94□□□□□ -1.46
COL4A1P02462 EDNRA-204ENST00000506066 1032 ntTSL 1 (best) BASIC5.94□□□□□ -1.46
COL4A1P02462 AC096759.1-201ENST00000510744 473 ntTSL 3 BASIC5.94□□□□□ -1.46
COL4A1P02462 AP002981.1-201ENST00000517692 975 ntBASIC5.94□□□□□ -1.46
COL4A1P02462 AC079906.1-201ENST00000621214 815 ntTSL 3 BASIC5.94□□□□□ -1.46
COL4A1P02462 LEUTX-202ENST00000638280 667 ntAPPRIS P1 TSL 3 BASIC5.94□□□□□ -1.46
COL4A1P02462 OR52N4-202ENST00000641350 1276 ntAPPRIS P1 BASIC5.94□□□□□ -1.46
COL4A1P02462 TRPS1-203ENST00000395715 9990 ntAPPRIS P1 TSL 1 (best) BASIC5.94□□□□□ -1.46
COL4A1P02462 NRIP1-201ENST00000318948 7556 ntAPPRIS P1 TSL 2 BASIC5.94□□□□□ -1.46
COL4A1P02462 TLK1P1-201ENST00000456760 2440 ntBASIC5.94□□□□□ -1.46
COL4A1P02462 LRRN3-204ENST00000451085 3725 ntAPPRIS P1 TSL 2 BASIC5.94□□□□□ -1.46
COL4A1P02462 HSD17B11-201ENST00000358290 1885 ntAPPRIS P1 TSL 1 (best) BASIC5.94□□□□□ -1.46
COL4A1P02462 RALGAPA1-202ENST00000382366 6328 ntTSL 1 (best) BASIC5.94□□□□□ -1.46
COL4A1P02462 PPEF1-201ENST00000349874 2687 ntTSL 5 BASIC5.94□□□□□ -1.46
COL4A1P02462 AL356317.1-201ENST00000396110 1436 ntBASIC5.94□□□□□ -1.46
COL4A1P02462 AC107953.2-201ENST00000518362 1408 ntTSL 1 (best) BASIC5.94□□□□□ -1.46
COL4A1P02462 DLG2-203ENST00000376104 5139 ntAPPRIS P3 TSL 1 (best) BASIC5.94□□□□□ -1.46
COL4A1P02462 ZNF230-201ENST00000429154 4115 ntAPPRIS P1 TSL 1 (best) BASIC5.94□□□□□ -1.46
COL4A1P02462 ZNF780A-203ENST00000450241 7500 ntTSL 2 BASIC5.94□□□□□ -1.46
COL4A1P02462 LINC00314-201ENST00000324988 607 ntTSL 1 (best) BASIC5.94□□□□□ -1.46
COL4A1P02462 IGLV5-48-201ENST00000390293 369 ntAPPRIS P1 BASIC5.94□□□□□ -1.46
COL4A1P02462 RPS3AP23-201ENST00000401762 784 ntBASIC5.94□□□□□ -1.46
COL4A1P02462 AC234779.1-201ENST00000425910 285 ntBASIC5.94□□□□□ -1.46
COL4A1P02462 RN7SL41P-201ENST00000476144 297 ntBASIC5.94□□□□□ -1.46
COL4A1P02462 AC090058.1-201ENST00000498788 435 ntBASIC5.94□□□□□ -1.46
COL4A1P02462 ENPP7P11-201ENST00000505915 627 ntBASIC5.94□□□□□ -1.46
COL4A1P02462 AC016559.2-201ENST00000510759 359 ntBASIC5.94□□□□□ -1.46
COL4A1P02462 RN7SKP122-201ENST00000515923 296 ntBASIC5.94□□□□□ -1.46
COL4A1P02462 AC124067.3-201ENST00000522643 847 ntTSL 3 BASIC5.94□□□□□ -1.46
COL4A1P02462 C11orf74-210ENST00000534635 801 ntAPPRIS ALT2 TSL 2 BASIC5.94□□□□□ -1.46
COL4A1P02462 PYM1-205ENST00000547925 499 ntTSL 3 BASIC5.94□□□□□ -1.46
COL4A1P02462 LINC02327-203ENST00000550122 738 ntTSL 2 BASIC5.94□□□□□ -1.46
COL4A1P02462 ZFAND6-204ENST00000558087 909 ntAPPRIS P1 TSL 5 BASIC5.94□□□□□ -1.46
COL4A1P02462 AC109462.2-201ENST00000558730 763 ntTSL 3 BASIC5.94□□□□□ -1.46
COL4A1P02462 NDUFB4P11-201ENST00000560510 395 ntBASIC5.94□□□□□ -1.46
COL4A1P02462 LINC02186-201ENST00000575767 885 ntTSL 1 (best) BASIC5.94□□□□□ -1.46
COL4A1P02462 AC020915.5-201ENST00000596836 964 ntBASIC5.94□□□□□ -1.46
COL4A1P02462 AC012414.7-202ENST00000622705 1090 ntBASIC5.94□□□□□ -1.46
COL4A1P02462 MYO3A-203ENST00000376302 2723 ntTSL 1 (best) BASIC5.94□□□□□ -1.46
COL4A1P02462 SLC26A5-208ENST00000393730 2498 ntTSL 1 (best) BASIC5.94□□□□□ -1.46
COL4A1P02462 GAPVD1-202ENST00000297933 6003 ntAPPRIS ALT2 TSL 1 (best) BASIC5.94□□□□□ -1.46
COL4A1P02462 KLHL13-201ENST00000262820 3972 ntAPPRIS P3 TSL 1 (best) BASIC5.94□□□□□ -1.46
COL4A1P02462 TRAM2-201ENST00000182527 6908 ntAPPRIS P1 TSL 1 (best) BASIC5.94□□□□□ -1.46
COL4A1P02462 CAV1-205ENST00000405348 2443 ntAPPRIS ALT1 TSL 5 BASIC5.94□□□□□ -1.46
COL4A1P02462 PIGN-239ENST00000639902 4439 ntTSL 5 BASIC5.93□□□□□ -1.46
COL4A1P02462 DNAJC16-202ENST00000375847 6069 ntAPPRIS P1 TSL 1 (best) BASIC5.93□□□□□ -1.46
COL4A1P02462 COL14A1-209ENST00000537875 3119 ntTSL 5 BASIC5.93□□□□□ -1.46
COL4A1P02462 ARFGEF3-201ENST00000251691 14877 ntAPPRIS P1 TSL 1 (best) BASIC5.93□□□□□ -1.46
COL4A1P02462 ZNF532-214ENST00000589288 5585 ntAPPRIS P1 TSL 5 BASIC5.93□□□□□ -1.46
COL4A1P02462 AC007382.1-201ENST00000624376 2618 ntBASIC5.93□□□□□ -1.46
COL4A1P02462 ZNF510-201ENST00000223428 5154 ntAPPRIS P1 TSL 1 (best) BASIC5.93□□□□□ -1.46
COL4A1P02462 ABLIM1-202ENST00000369252 7690 ntTSL 5 BASIC5.93□□□□□ -1.46
COL4A1P02462 NAT2-201ENST00000286479 1322 ntAPPRIS P1 TSL 1 (best) BASIC5.93□□□□□ -1.46
COL4A1P02462 ATPAF1-212ENST00000542495 1779 ntTSL 2 BASIC5.93□□□□□ -1.46
COL4A1P02462 AC018557.1-201ENST00000569274 1790 ntTSL 5 BASIC5.93□□□□□ -1.46
COL4A1P02462 OSER1-202ENST00000372970 1616 ntAPPRIS P1 TSL 3 BASIC5.93□□□□□ -1.46
COL4A1P02462 RGS4-202ENST00000367908 2606 ntTSL 2 BASIC5.93□□□□□ -1.46
COL4A1P02462 ZCCHC6-204ENST00000375957 2262 ntTSL 2 BASIC5.93□□□□□ -1.46
COL4A1P02462 OR4K15-201ENST00000305051 1216 ntBASIC5.93□□□□□ -1.46
COL4A1P02462 AC007618.1-201ENST00000366455 732 ntBASIC5.93□□□□□ -1.46
COL4A1P02462 SNORA48.4-201ENST00000391089 134 ntBASIC5.93□□□□□ -1.46
COL4A1P02462 RNA5SP397-201ENST00000391323 118 ntBASIC5.93□□□□□ -1.46
COL4A1P02462 AC073143.1-201ENST00000436316 395 ntBASIC5.93□□□□□ -1.46
COL4A1P02462 AP001434.1-201ENST00000444977 287 ntTSL 3 BASIC5.93□□□□□ -1.46
COL4A1P02462 EIF2S2P2-201ENST00000447161 982 ntBASIC5.93□□□□□ -1.46
COL4A1P02462 AL035454.1-201ENST00000470758 433 ntTSL 3 BASIC5.93□□□□□ -1.46
COL4A1P02462 LINC01206-203ENST00000476815 482 ntTSL 3 BASIC5.93□□□□□ -1.46
COL4A1P02462 AL136537.1-202ENST00000501725 430 ntTSL 3 BASIC5.93□□□□□ -1.46
COL4A1P02462 LINC02236-201ENST00000508881 552 ntTSL 4 BASIC5.93□□□□□ -1.46
Retrieved 100 of 98,524 protein–RNA pairs in 82.5 ms