Protein–RNA interactions for Protein: P01375

TNF, Tumor necrosis factor, humanhuman

Predictions only

Length 233 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TNFP01375 Z80107.2-201ENST00000445127 392 ntBASIC4.97□□□□□ -1.61
TNFP01375 AC004980.3-201ENST00000447046 365 ntBASIC4.97□□□□□ -1.61
TNFP01375 AC092324.1-201ENST00000468671 324 ntBASIC4.97□□□□□ -1.61
TNFP01375 LINC02224-201ENST00000505706 584 ntTSL 4 BASIC4.97□□□□□ -1.61
TNFP01375 AC016573.1-201ENST00000523205 539 ntTSL 3 BASIC4.97□□□□□ -1.61
TNFP01375 AC021006.3-201ENST00000530771 192 ntBASIC4.97□□□□□ -1.61
TNFP01375 PCED1B-AS1-210ENST00000552975 378 ntTSL 2 BASIC4.97□□□□□ -1.61
TNFP01375 LINC02313-201ENST00000553330 550 ntTSL 2 BASIC4.97□□□□□ -1.61
TNFP01375 DUXA-201ENST00000554048 1006 ntAPPRIS P1 TSL 3 BASIC4.97□□□□□ -1.61
TNFP01375 AL161757.4-204ENST00000557136 834 ntTSL 3 BASIC4.97□□□□□ -1.61
TNFP01375 AC091117.1-201ENST00000560967 426 ntTSL 5 BASIC4.97□□□□□ -1.61
TNFP01375 RN7SL290P-201ENST00000578661 300 ntBASIC4.97□□□□□ -1.61
TNFP01375 LINC01676-204ENST00000595309 871 ntTSL 5 BASIC4.97□□□□□ -1.61
TNFP01375 AC104785.1-201ENST00000603220 588 ntBASIC4.97□□□□□ -1.61
TNFP01375 AP005432.2-201ENST00000608162 586 ntBASIC4.97□□□□□ -1.61
TNFP01375 CTSLP2-203ENST00000628708 493 ntTSL 5 BASIC4.97□□□□□ -1.61
TNFP01375 C2orf83-206ENST00000642055 453 ntAPPRIS P3 BASIC4.97□□□□□ -1.61
TNFP01375 STAG2-205ENST00000371160 6045 ntAPPRIS P3 TSL 1 (best) BASIC4.97□□□□□ -1.61
TNFP01375 ZNF569-203ENST00000392150 1918 ntTSL 1 (best) BASIC4.97□□□□□ -1.61
TNFP01375 DNAH7-202ENST00000409063 1845 ntTSL 1 (best) BASIC4.97□□□□□ -1.61
TNFP01375 CEP295-206ENST00000531700 2890 ntAPPRIS ALT2 TSL 2 BASIC4.97□□□□□ -1.61
TNFP01375 TMEM99-201ENST00000301665 2058 ntAPPRIS P2 TSL 2 BASIC4.96□□□□□ -1.61
TNFP01375 ERC2-201ENST00000288221 6138 ntAPPRIS P1 TSL 1 (best) BASIC4.96□□□□□ -1.61
TNFP01375 CPA3-201ENST00000296046 1795 ntAPPRIS P1 TSL 1 (best) BASIC4.96□□□□□ -1.61
TNFP01375 ADH6-202ENST00000394897 3337 ntTSL 2 BASIC4.96□□□□□ -1.62
TNFP01375 OFD1P9Y-201ENST00000417699 1491 ntBASIC4.96□□□□□ -1.62
TNFP01375 AC005162.3-201ENST00000609389 3695 ntTSL 5 BASIC4.96□□□□□ -1.62
TNFP01375 OR2D2-201ENST00000299459 1110 ntAPPRIS P1 BASIC4.96□□□□□ -1.62
TNFP01375 AC135895.1-201ENST00000360528 1058 ntTSL 5 BASIC4.96□□□□□ -1.62
TNFP01375 TRBV24-1-201ENST00000390397 381 ntAPPRIS P1 BASIC4.96□□□□□ -1.62
TNFP01375 U3.23-201ENST00000391132 200 ntBASIC4.96□□□□□ -1.62
TNFP01375 BMS1P17-201ENST00000413661 723 ntTSL 1 (best) BASIC4.96□□□□□ -1.62
TNFP01375 RPL12P43-201ENST00000420608 499 ntBASIC4.96□□□□□ -1.62
TNFP01375 AL356056.1-206ENST00000424615 407 ntTSL 5 BASIC4.96□□□□□ -1.62
TNFP01375 AL360081.1-201ENST00000428299 555 ntBASIC4.96□□□□□ -1.62
TNFP01375 HSPD1P12-201ENST00000429127 1069 ntBASIC4.96□□□□□ -1.62
TNFP01375 NPM1P18-201ENST00000434232 732 ntBASIC4.96□□□□□ -1.62
TNFP01375 AL354863.1-204ENST00000436430 556 ntTSL 3 BASIC4.96□□□□□ -1.62
TNFP01375 IGHV5-78-201ENST00000450948 295 ntBASIC4.96□□□□□ -1.62
TNFP01375 AL158825.2-201ENST00000455336 670 ntTSL 5 BASIC4.96□□□□□ -1.62
TNFP01375 ADGRL3-AS1-202ENST00000504135 542 ntTSL 5 BASIC4.96□□□□□ -1.62
TNFP01375 BTF3P13-201ENST00000513224 490 ntBASIC4.96□□□□□ -1.62
TNFP01375 HAPLN1-206ENST00000514416 1145 ntTSL 5 BASIC4.96□□□□□ -1.62
TNFP01375 AC130364.2-201ENST00000528639 604 ntBASIC4.96□□□□□ -1.62
TNFP01375 MS4A6A-210ENST00000529054 1160 ntTSL 5 BASIC4.96□□□□□ -1.62
TNFP01375 KLRK1-204ENST00000540818 951 ntAPPRIS P1 TSL 1 (best) BASIC4.96□□□□□ -1.62
TNFP01375 AC079907.2-202ENST00000547004 423 ntTSL 2 BASIC4.96□□□□□ -1.62
TNFP01375 LINC02402-201ENST00000550337 1212 ntTSL 1 (best) BASIC4.96□□□□□ -1.62
TNFP01375 LINC00687-203ENST00000558175 696 ntTSL 3 BASIC4.96□□□□□ -1.62
TNFP01375 AC092134.1-201ENST00000563690 800 ntTSL 3 BASIC4.96□□□□□ -1.62
TNFP01375 C18orf32-202ENST00000582392 714 ntAPPRIS P1 TSL 3 BASIC4.96□□□□□ -1.62
TNFP01375 AC005324.5-201ENST00000584540 571 ntTSL 5 BASIC4.96□□□□□ -1.62
TNFP01375 AC092364.1-202ENST00000593824 565 ntTSL 4 BASIC4.96□□□□□ -1.62
TNFP01375 AP001521.2-201ENST00000608772 546 ntBASIC4.96□□□□□ -1.62
TNFP01375 SLC8A1-AS1-218ENST00000610721 956 ntTSL 5 BASIC4.96□□□□□ -1.62
TNFP01375 LINC00923-207ENST00000619015 505 ntTSL 5 BASIC4.96□□□□□ -1.62
TNFP01375 RFC1-201ENST00000349703 4859 ntAPPRIS P3 TSL 1 (best) BASIC4.96□□□□□ -1.62
TNFP01375 SREK1-203ENST00000380918 2433 ntTSL 1 (best) BASIC4.96□□□□□ -1.62
TNFP01375 TJP1-202ENST00000356107 6747 ntAPPRIS ALT2 TSL 5 BASIC4.96□□□□□ -1.62
TNFP01375 ALB-219ENST00000621085 1418 ntTSL 5 BASIC4.96□□□□□ -1.62
TNFP01375 AL358975.1-203ENST00000413352 2932 ntTSL 3 BASIC4.96□□□□□ -1.62
TNFP01375 BX088651.2-201ENST00000425493 3614 ntTSL 2 BASIC4.96□□□□□ -1.62
TNFP01375 DYNC1I2-202ENST00000397119 2604 ntTSL 1 (best) BASIC4.95□□□□□ -1.62
TNFP01375 LINC01153-201ENST00000429809 2864 ntTSL 1 (best) BASIC4.95□□□□□ -1.62
TNFP01375 HSPA8P14-201ENST00000552265 1805 ntBASIC4.95□□□□□ -1.62
TNFP01375 DAZ4-207ENST00000634662 1832 ntAPPRIS ALT2 TSL 5 BASIC4.95□□□□□ -1.62
TNFP01375 SPART-201ENST00000355182 4820 ntAPPRIS P1 TSL 5 BASIC4.95□□□□□ -1.62
TNFP01375 ATRX-202ENST00000395603 10218 ntAPPRIS ALT2 TSL 1 (best) BASIC4.95□□□□□ -1.62
TNFP01375 OPRM1-217ENST00000522236 2459 ntTSL 1 (best) BASIC4.95□□□□□ -1.62
TNFP01375 HDAC9-204ENST00000406451 9705 ntAPPRIS ALT1 TSL 1 (best) BASIC4.95□□□□□ -1.62
TNFP01375 IL5-201ENST00000231454 816 ntAPPRIS P1 TSL 1 (best) BASIC4.95□□□□□ -1.62
TNFP01375 SNTN-201ENST00000343837 1090 ntAPPRIS P1 TSL 2 BASIC4.95□□□□□ -1.62
TNFP01375 AC009506.2-201ENST00000420635 840 ntBASIC4.95□□□□□ -1.62
TNFP01375 COX6CP13-201ENST00000428703 226 ntBASIC4.95□□□□□ -1.62
TNFP01375 AC092159.1-201ENST00000433724 493 ntTSL 2 BASIC4.95□□□□□ -1.62
TNFP01375 MTND2P40-201ENST00000436718 841 ntBASIC4.95□□□□□ -1.62
TNFP01375 AL450472.1-201ENST00000439434 405 ntTSL 2 BASIC4.95□□□□□ -1.62
TNFP01375 TCEA1P1-201ENST00000449716 880 ntBASIC4.95□□□□□ -1.62
TNFP01375 AC096543.1-201ENST00000455038 823 ntTSL 3 BASIC4.95□□□□□ -1.62
TNFP01375 TM4SF1-AS1-202ENST00000496491 754 ntTSL 2 BASIC4.95□□□□□ -1.62
TNFP01375 AC105233.1-201ENST00000498840 781 ntBASIC4.95□□□□□ -1.62
TNFP01375 AC091564.3-201ENST00000527398 429 ntTSL 3 BASIC4.95□□□□□ -1.62
TNFP01375 AC068643.1-201ENST00000548594 755 ntTSL 5 BASIC4.95□□□□□ -1.62
TNFP01375 LINC02156-201ENST00000552320 483 ntTSL 2 BASIC4.95□□□□□ -1.62
TNFP01375 UBA2-208ENST00000592791 910 ntTSL 2 BASIC4.95□□□□□ -1.62
TNFP01375 AC015726.1-202ENST00000602532 475 ntTSL 5 BASIC4.95□□□□□ -1.62
TNFP01375 AC087385.3-201ENST00000620477 187 ntBASIC4.95□□□□□ -1.62
TNFP01375 AC079906.1-201ENST00000621214 815 ntTSL 3 BASIC4.95□□□□□ -1.62
TNFP01375 AC002384.2-201ENST00000636036 790 ntTSL 3 BASIC4.95□□□□□ -1.62
TNFP01375 ADAM29-203ENST00000445694 3244 ntAPPRIS P1 TSL 1 (best) BASIC4.95□□□□□ -1.62
TNFP01375 EFCAB3-201ENST00000305286 1542 ntAPPRIS P1 TSL 1 (best) BASIC4.95□□□□□ -1.62
TNFP01375 AC087257.1-201ENST00000506925 2639 ntTSL 4 BASIC4.95□□□□□ -1.62
TNFP01375 SMC2-203ENST00000374793 5909 ntAPPRIS P1 TSL 1 (best) BASIC4.95□□□□□ -1.62
TNFP01375 MAPK10-236ENST00000638313 3971 ntTSL 5 BASIC4.95□□□□□ -1.62
TNFP01375 MLIP-213ENST00000514921 5743 ntAPPRIS ALT2 TSL 1 (best) BASIC4.95□□□□□ -1.62
TNFP01375 CLCA3P-201ENST00000284054 2407 ntTSL 5 BASIC4.95□□□□□ -1.62
TNFP01375 AC090826.1-202ENST00000562009 3337 ntTSL 1 (best) BASIC4.95□□□□□ -1.62
TNFP01375 HEMGN-202ENST00000616898 2305 ntAPPRIS P1 TSL 1 (best) BASIC4.95□□□□□ -1.62
TNFP01375 FAM196B-201ENST00000377365 2999 ntAPPRIS P1 TSL 2 BASIC4.95□□□□□ -1.62
TNFP01375 FTX-210ENST00000603037 8347 ntTSL 5 BASIC4.95□□□□□ -1.62
Retrieved 100 of 98,524 protein–RNA pairs in 77.4 ms