Protein–RNA interactions for Protein: O00322

UPK1A, Uroplakin-1a, humanhuman

Predictions only

Length 258 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UPK1AO00322 PRUNE2-207ENST00000428286 12437 ntTSL 5 BASIC4.81□□□□□ -1.64
UPK1AO00322 OR4G1P-202ENST00000641173 1788 ntBASIC4.81□□□□□ -1.64
UPK1AO00322 ZBTB8A-202ENST00000373510 7075 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
UPK1AO00322 AC112198.2-201ENST00000426589 6996 ntBASIC4.8□□□□□ -1.64
UPK1AO00322 STAU2-220ENST00000522695 2646 ntAPPRIS ALT1 TSL 1 (best) BASIC4.8□□□□□ -1.64
UPK1AO00322 ZFP14-201ENST00000270001 7489 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
UPK1AO00322 LINC00919-201ENST00000561513 1658 ntTSL 2 BASIC4.8□□□□□ -1.64
UPK1AO00322 UBR5-204ENST00000518205 1931 ntTSL 5 BASIC4.8□□□□□ -1.64
UPK1AO00322 RNF182-207ENST00000537663 3382 ntAPPRIS P1 TSL 4 BASIC4.8□□□□□ -1.64
UPK1AO00322 AC092821.1-204ENST00000518709 3552 ntTSL 5 BASIC4.8□□□□□ -1.64
UPK1AO00322 DUTP5-201ENST00000406790 469 ntBASIC4.8□□□□□ -1.64
UPK1AO00322 MIR1286-201ENST00000408112 78 ntBASIC4.8□□□□□ -1.64
UPK1AO00322 AF015720.1-201ENST00000412240 349 ntTSL 3 BASIC4.8□□□□□ -1.64
UPK1AO00322 TRBV29-1-201ENST00000422143 402 ntAPPRIS P1 BASIC4.8□□□□□ -1.64
UPK1AO00322 AL035404.2-201ENST00000424418 304 ntTSL 3 BASIC4.8□□□□□ -1.64
UPK1AO00322 HSPE1P16-201ENST00000426640 348 ntBASIC4.8□□□□□ -1.64
UPK1AO00322 HNRNPA3P4-201ENST00000427514 803 ntBASIC4.8□□□□□ -1.64
UPK1AO00322 AC245047.2-201ENST00000441060 530 ntBASIC4.8□□□□□ -1.64
UPK1AO00322 LINC01781-202ENST00000443104 591 ntTSL 2 BASIC4.8□□□□□ -1.64
UPK1AO00322 AL161722.1-201ENST00000446972 1032 ntBASIC4.8□□□□□ -1.64
UPK1AO00322 AL031584.1-201ENST00000447169 754 ntBASIC4.8□□□□□ -1.64
UPK1AO00322 PPIAP20-201ENST00000449839 135 ntBASIC4.8□□□□□ -1.64
UPK1AO00322 AL445433.1-201ENST00000457507 257 ntBASIC4.8□□□□□ -1.64
UPK1AO00322 COPS8P2-201ENST00000473228 627 ntBASIC4.8□□□□□ -1.64
UPK1AO00322 ALG13-211ENST00000473389 693 ntTSL 2 BASIC4.8□□□□□ -1.64
UPK1AO00322 RPL37-204ENST00000508493 553 ntAPPRIS ALT1 TSL 1 (best) BASIC4.8□□□□□ -1.64
UPK1AO00322 AC020551.1-201ENST00000512036 539 ntTSL 3 BASIC4.8□□□□□ -1.64
UPK1AO00322 AC100801.1-201ENST00000517368 517 ntTSL 3 BASIC4.8□□□□□ -1.64
UPK1AO00322 AC027308.1-201ENST00000517993 110 ntBASIC4.8□□□□□ -1.64
UPK1AO00322 AC073023.1-201ENST00000522896 773 ntTSL 5 BASIC4.8□□□□□ -1.64
UPK1AO00322 MAL2-208ENST00000523307 556 ntTSL 4 BASIC4.8□□□□□ -1.64
UPK1AO00322 HNF1A-AS1-203ENST00000537361 659 ntTSL 3 BASIC4.8□□□□□ -1.64
UPK1AO00322 TRAV30-201ENST00000557168 337 ntAPPRIS P1 BASIC4.8□□□□□ -1.64
UPK1AO00322 Z98949.1-202ENST00000600211 1282 ntTSL 5 BASIC4.8□□□□□ -1.64
UPK1AO00322 AC073254.1-207ENST00000600482 714 ntTSL 5 BASIC4.8□□□□□ -1.64
UPK1AO00322 AC095055.1-201ENST00000603472 1113 ntBASIC4.8□□□□□ -1.64
UPK1AO00322 USP32P2-207ENST00000608376 253 ntTSL 5 BASIC4.8□□□□□ -1.64
UPK1AO00322 AC022467.1-201ENST00000614738 749 ntBASIC4.8□□□□□ -1.64
UPK1AO00322 RPSAP73-201ENST00000614820 330 ntBASIC4.8□□□□□ -1.64
UPK1AO00322 MIR8069-1-201ENST00000616627 86 ntBASIC4.8□□□□□ -1.64
UPK1AO00322 AC008115.4-201ENST00000619780 775 ntBASIC4.8□□□□□ -1.64
UPK1AO00322 MIR8069-2-201ENST00000621412 86 ntBASIC4.8□□□□□ -1.64
UPK1AO00322 Metazoa_SRP.93-201ENST00000622525 276 ntBASIC4.8□□□□□ -1.64
UPK1AO00322 LINC01232-203ENST00000625369 576 ntTSL 4 BASIC4.8□□□□□ -1.64
UPK1AO00322 SPTY2D1-AS1-204ENST00000634992 373 ntAPPRIS P5 TSL 5 BASIC4.8□□□□□ -1.64
UPK1AO00322 UOX-205ENST00000640983 544 ntTSL 4 BASIC4.8□□□□□ -1.64
UPK1AO00322 SDR42E1-201ENST00000328945 11566 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
UPK1AO00322 OR5AQ1P-203ENST00000641818 1529 ntBASIC4.8□□□□□ -1.64
UPK1AO00322 CSPP1-203ENST00000519668 3715 ntAPPRIS ALT2 TSL 1 (best) BASIC4.8□□□□□ -1.64
UPK1AO00322 ZNF678-201ENST00000343776 8556 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
UPK1AO00322 NSD1-202ENST00000354179 12195 ntTSL 5 BASIC4.8□□□□□ -1.64
UPK1AO00322 PLCB1-211ENST00000617005 6458 ntTSL 5 BASIC4.8□□□□□ -1.64
UPK1AO00322 STAU2-210ENST00000521210 1950 ntTSL 2 BASIC4.8□□□□□ -1.64
UPK1AO00322 RASGEF1B-207ENST00000509081 3016 ntAPPRIS ALT1 TSL 5 BASIC4.8□□□□□ -1.64
UPK1AO00322 AC093849.1-201ENST00000563631 2209 ntBASIC4.8□□□□□ -1.64
UPK1AO00322 FZD6-205ENST00000522566 3719 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
UPK1AO00322 ASXL3-201ENST00000269197 11399 ntAPPRIS P2 TSL 5 BASIC4.8□□□□□ -1.64
UPK1AO00322 FASTKD3-201ENST00000264669 2402 ntAPPRIS P1 TSL 2 BASIC4.8□□□□□ -1.64
UPK1AO00322 TRIM77-201ENST00000398290 1353 ntAPPRIS P1 TSL 5 BASIC4.79□□□□□ -1.64
UPK1AO00322 CNGA1-202ENST00000402813 2867 ntAPPRIS ALT2 TSL 1 (best) BASIC4.79□□□□□ -1.64
UPK1AO00322 MTERF1-202ENST00000406735 1639 ntAPPRIS ALT2 TSL 2 BASIC4.79□□□□□ -1.64
UPK1AO00322 CASC19-221ENST00000641309 1382 ntBASIC4.79□□□□□ -1.64
UPK1AO00322 GABRA2-205ENST00000507069 1562 ntTSL 3 BASIC4.79□□□□□ -1.64
UPK1AO00322 AL132656.3-201ENST00000606384 1595 ntBASIC4.79□□□□□ -1.64
UPK1AO00322 LINC01902-203ENST00000637369 7356 ntTSL 5 BASIC4.79□□□□□ -1.64
UPK1AO00322 PCDH15-206ENST00000373965 9237 ntAPPRIS ALT2 TSL 5 BASIC4.79□□□□□ -1.64
UPK1AO00322 CLCN5-202ENST00000376088 10108 ntTSL 2 BASIC4.79□□□□□ -1.64
UPK1AO00322 OR2AE1-201ENST00000316368 1071 ntAPPRIS P1 BASIC4.79□□□□□ -1.64
UPK1AO00322 SNORA17.1-201ENST00000362945 126 ntBASIC4.79□□□□□ -1.64
UPK1AO00322 FABP7-202ENST00000368444 1026 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
UPK1AO00322 F9-202ENST00000394090 1272 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
UPK1AO00322 TMBIM7P-201ENST00000418074 855 ntBASIC4.79□□□□□ -1.64
UPK1AO00322 AC013429.2-201ENST00000418798 781 ntBASIC4.79□□□□□ -1.64
UPK1AO00322 MORF4L2-205ENST00000423833 717 ntTSL 5 BASIC4.79□□□□□ -1.64
UPK1AO00322 TXNIP-201ENST00000425134 1225 ntTSL 2 BASIC4.79□□□□□ -1.64
UPK1AO00322 TTTY22-201ENST00000445253 427 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
UPK1AO00322 AL606490.1-201ENST00000452266 765 ntBASIC4.79□□□□□ -1.64
UPK1AO00322 AC104126.1-201ENST00000504004 711 ntTSL 3 BASIC4.79□□□□□ -1.64
UPK1AO00322 ENPP7P9-201ENST00000514456 627 ntBASIC4.79□□□□□ -1.64
UPK1AO00322 AC026719.2-201ENST00000515656 295 ntTSL 3 BASIC4.79□□□□□ -1.64
UPK1AO00322 AC008575.1-201ENST00000520401 694 ntAPPRIS P1 TSL 3 BASIC4.79□□□□□ -1.64
UPK1AO00322 AC005868.1-201ENST00000536421 331 ntBASIC4.79□□□□□ -1.64
UPK1AO00322 CACNA1C-IT1-201ENST00000542984 687 ntTSL 3 BASIC4.79□□□□□ -1.64
UPK1AO00322 AC087477.3-201ENST00000559214 552 ntTSL 4 BASIC4.79□□□□□ -1.64
UPK1AO00322 AC007225.2-201ENST00000562529 256 ntBASIC4.79□□□□□ -1.64
UPK1AO00322 MYLK-221ENST00000583087 678 ntTSL 4 BASIC4.79□□□□□ -1.64
UPK1AO00322 ZNF561-AS1-207ENST00000591932 676 ntTSL 5 BASIC4.79□□□□□ -1.64
UPK1AO00322 RNF138P2-201ENST00000603490 592 ntBASIC4.79□□□□□ -1.64
UPK1AO00322 AP002505.2-201ENST00000623585 696 ntBASIC4.79□□□□□ -1.64
UPK1AO00322 DAOA-212ENST00000640578 378 ntAPPRIS ALT2 TSL 5 BASIC4.79□□□□□ -1.64
UPK1AO00322 RUVBL2-214ENST00000640699 153 ntTSL 5 BASIC4.79□□□□□ -1.64
UPK1AO00322 AC126323.6-202ENST00000568092 3511 ntBASIC4.79□□□□□ -1.64
UPK1AO00322 OFD1P9Y-201ENST00000417699 1491 ntBASIC4.79□□□□□ -1.64
UPK1AO00322 LINC00704-201ENST00000430998 1478 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
UPK1AO00322 SALL4P2-201ENST00000423288 2910 ntBASIC4.79□□□□□ -1.64
UPK1AO00322 HEATR5A-203ENST00000543095 7840 ntAPPRIS P1 TSL 5 BASIC4.79□□□□□ -1.64
UPK1AO00322 FHL5-201ENST00000326771 2031 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
UPK1AO00322 EMSY-205ENST00000524767 4116 ntTSL 1 (best) BASIC4.78□□□□□ -1.64
UPK1AO00322 TRAT1-202ENST00000426646 1596 ntTSL 1 (best) BASIC4.78□□□□□ -1.64
UPK1AO00322 BICRAL-201ENST00000314073 6530 ntAPPRIS P1 TSL 1 (best) BASIC4.78□□□□□ -1.64
Retrieved 100 of 98,524 protein–RNA pairs in 85.5 ms