Protein–RNA interactions for Protein: A6NER0

TBC1D3F, TBC1 domain family member 3F, humanhuman

Predicted RBP Predictions only

Length 549 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TBC1D3FA6NER0 DDX4-202ENST00000354991 2324 ntTSL 5 BASIC5.63□□□□□ -1.51
TBC1D3FA6NER0 ELMO1-207ENST00000442504 3154 ntAPPRIS P1 TSL 2 BASIC5.63□□□□□ -1.51
TBC1D3FA6NER0 PWAR1-201ENST00000624188 2414 ntBASIC5.63□□□□□ -1.51
TBC1D3FA6NER0 CD69-201ENST00000228434 1676 ntAPPRIS P1 TSL 1 (best) BASIC5.63□□□□□ -1.51
TBC1D3FA6NER0 ZNF431-201ENST00000311048 13894 ntAPPRIS P1 TSL 1 (best) BASIC5.62□□□□□ -1.51
TBC1D3FA6NER0 SSH2-204ENST00000540801 4538 ntAPPRIS ALT2 TSL 2 BASIC5.62□□□□□ -1.51
TBC1D3FA6NER0 ESCO1-204ENST00000622333 1850 ntTSL 2 BASIC5.62□□□□□ -1.51
TBC1D3FA6NER0 TCF4-268ENST00000629387 3789 ntAPPRIS ALT1 TSL 5 BASIC5.62□□□□□ -1.51
TBC1D3FA6NER0 AC025470.1-201ENST00000510053 2032 ntBASIC5.62□□□□□ -1.51
TBC1D3FA6NER0 PCGF5-201ENST00000336126 7018 ntAPPRIS P1 TSL 1 (best) BASIC5.62□□□□□ -1.51
TBC1D3FA6NER0 CLCN3-201ENST00000347613 3635 ntAPPRIS P4 TSL 1 (best) BASIC5.62□□□□□ -1.51
TBC1D3FA6NER0 TFPI-202ENST00000339091 1088 ntTSL 1 (best) BASIC5.62□□□□□ -1.51
TBC1D3FA6NER0 SSX1-201ENST00000376919 1298 ntAPPRIS P1 TSL 1 (best) BASIC5.62□□□□□ -1.51
TBC1D3FA6NER0 RNU6-354P-201ENST00000383862 107 ntBASIC5.62□□□□□ -1.51
TBC1D3FA6NER0 RNU6-610P-201ENST00000384264 107 ntBASIC5.62□□□□□ -1.51
TBC1D3FA6NER0 SLC19A3-202ENST00000409287 644 ntTSL 3 BASIC5.62□□□□□ -1.51
TBC1D3FA6NER0 RPL35AP24-201ENST00000413846 330 ntBASIC5.62□□□□□ -1.51
TBC1D3FA6NER0 HYALP1-201ENST00000417674 1279 ntBASIC5.62□□□□□ -1.51
TBC1D3FA6NER0 SETP9-201ENST00000423837 832 ntBASIC5.62□□□□□ -1.51
TBC1D3FA6NER0 TSSK4-203ENST00000428351 576 ntTSL 2 BASIC5.62□□□□□ -1.51
TBC1D3FA6NER0 NDUFA5P10-201ENST00000432147 357 ntBASIC5.62□□□□□ -1.51
TBC1D3FA6NER0 AL627308.1-201ENST00000435693 821 ntBASIC5.62□□□□□ -1.51
TBC1D3FA6NER0 RPS3AP38-201ENST00000435889 763 ntBASIC5.62□□□□□ -1.51
TBC1D3FA6NER0 PA2G4P6-201ENST00000438325 1197 ntBASIC5.62□□□□□ -1.51
TBC1D3FA6NER0 AL139120.1-201ENST00000443652 358 ntTSL 3 BASIC5.62□□□□□ -1.51
TBC1D3FA6NER0 VDAC2P4-201ENST00000452925 711 ntBASIC5.62□□□□□ -1.51
TBC1D3FA6NER0 LINC02040-201ENST00000481004 556 ntTSL 5 BASIC5.62□□□□□ -1.51
TBC1D3FA6NER0 OR11I1P-201ENST00000486033 954 ntBASIC5.62□□□□□ -1.51
TBC1D3FA6NER0 RN7SL30P-201ENST00000488416 306 ntBASIC5.62□□□□□ -1.51
TBC1D3FA6NER0 AC093815.1-201ENST00000508637 280 ntBASIC5.62□□□□□ -1.51
TBC1D3FA6NER0 MTCYBP19-201ENST00000517463 1124 ntBASIC5.62□□□□□ -1.51
TBC1D3FA6NER0 AC007527.1-201ENST00000535528 313 ntTSL 2 BASIC5.62□□□□□ -1.51
TBC1D3FA6NER0 HNRNPCP1-201ENST00000556181 766 ntBASIC5.62□□□□□ -1.51
TBC1D3FA6NER0 AC018557.2-201ENST00000565082 536 ntTSL 5 BASIC5.62□□□□□ -1.51
TBC1D3FA6NER0 PDE6G-203ENST00000571224 526 ntAPPRIS P1 TSL 5 BASIC5.62□□□□□ -1.51
TBC1D3FA6NER0 DHFRP1-201ENST00000579682 559 ntBASIC5.62□□□□□ -1.51
TBC1D3FA6NER0 AC090457.1-201ENST00000579775 211 ntTSL 3 BASIC5.62□□□□□ -1.51
TBC1D3FA6NER0 AP005209.1-201ENST00000582531 928 ntTSL 5 BASIC5.62□□□□□ -1.51
TBC1D3FA6NER0 AP005242.1-201ENST00000583946 467 ntTSL 3 BASIC5.62□□□□□ -1.51
TBC1D3FA6NER0 IMMP1LP3-201ENST00000604197 224 ntBASIC5.62□□□□□ -1.51
TBC1D3FA6NER0 AC097717.1-250ENST00000608498 273 ntTSL 5 BASIC5.62□□□□□ -1.51
TBC1D3FA6NER0 AC021851.1-201ENST00000608537 1082 ntBASIC5.62□□□□□ -1.51
TBC1D3FA6NER0 BANCR-201ENST00000624238 473 ntTSL 2 BASIC5.62□□□□□ -1.51
TBC1D3FA6NER0 WDR75-207ENST00000631047 270 ntTSL 5 BASIC5.62□□□□□ -1.51
TBC1D3FA6NER0 AC011287.1-204ENST00000640300 1213 ntTSL 5 BASIC5.62□□□□□ -1.51
TBC1D3FA6NER0 AC134980.1-203ENST00000640541 570 ntTSL 4 BASIC5.62□□□□□ -1.51
TBC1D3FA6NER0 SAMMSON-209ENST00000641222 1100 ntBASIC5.62□□□□□ -1.51
TBC1D3FA6NER0 AC007382.1-201ENST00000624376 2618 ntBASIC5.62□□□□□ -1.51
TBC1D3FA6NER0 Z95114.1-201ENST00000624264 14574 ntBASIC5.62□□□□□ -1.51
TBC1D3FA6NER0 SLAMF6-202ENST00000368057 2712 ntAPPRIS ALT2 TSL 1 (best) BASIC5.62□□□□□ -1.51
TBC1D3FA6NER0 SCN1A-209ENST00000635750 8299 ntAPPRIS P3 TSL 5 BASIC5.62□□□□□ -1.51
TBC1D3FA6NER0 TESPA1-203ENST00000524622 4188 ntAPPRIS ALT2 TSL 1 (best) BASIC5.62□□□□□ -1.51
TBC1D3FA6NER0 ZNF92-203ENST00000431504 2947 ntTSL 1 (best) BASIC5.62□□□□□ -1.51
TBC1D3FA6NER0 AL592429.1-201ENST00000403909 1473 ntBASIC5.62□□□□□ -1.51
TBC1D3FA6NER0 AL360270.2-201ENST00000562952 5985 ntBASIC5.62□□□□□ -1.51
TBC1D3FA6NER0 NRDC-213ENST00000539524 3417 ntAPPRIS ALT2 TSL 1 (best) BASIC5.62□□□□□ -1.51
TBC1D3FA6NER0 AC008505.1-203ENST00000637345 1766 ntTSL 5 BASIC5.62□□□□□ -1.51
TBC1D3FA6NER0 ZNF780A-204ENST00000455521 3600 ntAPPRIS ALT2 TSL 5 BASIC5.62□□□□□ -1.51
TBC1D3FA6NER0 TCF7L2-206ENST00000355995 4073 ntTSL 1 (best) BASIC5.62□□□□□ -1.51
TBC1D3FA6NER0 DCN-202ENST00000393155 2133 ntAPPRIS P1 TSL 1 (best) BASIC5.62□□□□□ -1.51
TBC1D3FA6NER0 DSPP-202ENST00000399271 4331 ntAPPRIS P1 TSL 5 BASIC5.62□□□□□ -1.51
TBC1D3FA6NER0 KCNMB2-210ENST00000617329 2214 ntTSL 2 BASIC5.62□□□□□ -1.51
TBC1D3FA6NER0 CEP128-202ENST00000281129 4461 ntAPPRIS P1 TSL 1 (best) BASIC5.62□□□□□ -1.51
TBC1D3FA6NER0 FCGR3B-208ENST00000613418 2251 ntTSL 5 BASIC5.62□□□□□ -1.51
TBC1D3FA6NER0 CTTNBP2NL-201ENST00000271277 5897 ntAPPRIS P1 TSL 1 (best) BASIC5.61□□□□□ -1.51
TBC1D3FA6NER0 FOXN2-201ENST00000340553 5408 ntAPPRIS P1 TSL 1 (best) BASIC5.61□□□□□ -1.51
TBC1D3FA6NER0 EPC2-201ENST00000258484 3649 ntAPPRIS P1 TSL 1 (best) BASIC5.61□□□□□ -1.51
TBC1D3FA6NER0 GLYATL1-202ENST00000317391 1627 ntAPPRIS ALT2 TSL 1 (best) BASIC5.61□□□□□ -1.51
TBC1D3FA6NER0 C4orf17-201ENST00000326581 1636 ntAPPRIS P2 TSL 1 (best) BASIC5.61□□□□□ -1.51
TBC1D3FA6NER0 RN7SKP6-201ENST00000364795 319 ntBASIC5.61□□□□□ -1.51
TBC1D3FA6NER0 ARGLU1-202ENST00000375926 821 ntAPPRIS P1 TSL 5 BASIC5.61□□□□□ -1.51
TBC1D3FA6NER0 MIR551A-201ENST00000385042 96 ntBASIC5.61□□□□□ -1.51
TBC1D3FA6NER0 MIR105-2-201ENST00000385083 81 ntBASIC5.61□□□□□ -1.51
TBC1D3FA6NER0 AIMP1-202ENST00000394701 2586 ntAPPRIS ALT2 TSL 1 (best) BASIC5.61□□□□□ -1.51
TBC1D3FA6NER0 AC017048.1-201ENST00000412153 495 ntTSL 2 BASIC5.61□□□□□ -1.51
TBC1D3FA6NER0 AL160163.1-201ENST00000417465 403 ntTSL 3 BASIC5.61□□□□□ -1.51
TBC1D3FA6NER0 TXNIP-201ENST00000425134 1225 ntTSL 2 BASIC5.61□□□□□ -1.51
TBC1D3FA6NER0 CYCSP12-201ENST00000437729 300 ntBASIC5.61□□□□□ -1.51
TBC1D3FA6NER0 RPL7P33-201ENST00000444159 742 ntBASIC5.61□□□□□ -1.51
TBC1D3FA6NER0 AC092106.1-201ENST00000444291 373 ntBASIC5.61□□□□□ -1.51
TBC1D3FA6NER0 AL157400.3-201ENST00000449882 1298 ntTSL 5 BASIC5.61□□□□□ -1.51
TBC1D3FA6NER0 NDUFS1-207ENST00000455934 3361 ntTSL 2 BASIC5.61□□□□□ -1.51
TBC1D3FA6NER0 RN7SL799P-201ENST00000475891 298 ntBASIC5.61□□□□□ -1.51
TBC1D3FA6NER0 PHC3-208ENST00000481639 1075 ntTSL 1 (best) BASIC5.61□□□□□ -1.51
TBC1D3FA6NER0 AC004889.1-208ENST00000489077 423 ntTSL 3 BASIC5.61□□□□□ -1.51
TBC1D3FA6NER0 TRAV31-201ENST00000502780 342 ntBASIC5.61□□□□□ -1.51
TBC1D3FA6NER0 BTG4P1-201ENST00000510421 183 ntBASIC5.61□□□□□ -1.51
TBC1D3FA6NER0 AC012055.1-201ENST00000511346 1144 ntTSL 3 BASIC5.61□□□□□ -1.51
TBC1D3FA6NER0 ATG10-208ENST00000513634 618 ntTSL 2 BASIC5.61□□□□□ -1.51
TBC1D3FA6NER0 AC133963.2-201ENST00000513686 578 ntBASIC5.61□□□□□ -1.51
TBC1D3FA6NER0 AC107391.1-201ENST00000514966 412 ntTSL 2 BASIC5.61□□□□□ -1.51
TBC1D3FA6NER0 AC110288.1-201ENST00000517950 446 ntTSL 3 BASIC5.61□□□□□ -1.51
TBC1D3FA6NER0 AC105177.1-201ENST00000523110 555 ntTSL 4 BASIC5.61□□□□□ -1.51
TBC1D3FA6NER0 EYA4-211ENST00000525849 3456 ntTSL 5 BASIC5.61□□□□□ -1.51
TBC1D3FA6NER0 AP003086.2-201ENST00000534168 437 ntTSL 3 BASIC5.61□□□□□ -1.51
TBC1D3FA6NER0 MTRNR2L3-201ENST00000543500 1539 ntAPPRIS P1 BASIC5.61□□□□□ -1.51
TBC1D3FA6NER0 AC084759.1-201ENST00000561168 290 ntBASIC5.61□□□□□ -1.51
TBC1D3FA6NER0 PWRN4-201ENST00000563016 420 ntTSL 5 BASIC5.61□□□□□ -1.51
TBC1D3FA6NER0 AL163952.1-202ENST00000569625 600 ntBASIC5.61□□□□□ -1.51
TBC1D3FA6NER0 AC005695.2-201ENST00000579641 259 ntTSL 3 BASIC5.61□□□□□ -1.51
Retrieved 100 of 98,524 protein–RNA pairs in 84.7 ms