Protein–RNA interactions for Protein: Q9Y5F3

PCDHB1, Protocadherin beta-1, humanhuman

Predictions only

Length 818 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB1Q9Y5F3 LINC00560-201ENST00000564593 1599 ntTSL 1 (best) BASIC5.98□□□□□ -1.45
PCDHB1Q9Y5F3 SMARCE1-208ENST00000474246 2124 ntTSL 1 (best) BASIC5.98□□□□□ -1.45
PCDHB1Q9Y5F3 POU1F1-202ENST00000350375 1491 ntAPPRIS P1 TSL 1 (best) BASIC5.98□□□□□ -1.45
PCDHB1Q9Y5F3 SUCLG1-201ENST00000393868 1475 ntAPPRIS P1 TSL 1 (best) BASIC5.98□□□□□ -1.45
PCDHB1Q9Y5F3 BMPR1B-202ENST00000394931 1922 ntAPPRIS P1 TSL 1 (best) BASIC5.98□□□□□ -1.45
PCDHB1Q9Y5F3 NOVA1-206ENST00000539517 3912 ntAPPRIS P4 TSL 1 (best) BASIC5.98□□□□□ -1.45
PCDHB1Q9Y5F3 NAT1-201ENST00000307719 1815 ntAPPRIS P1 TSL 1 (best) BASIC5.98□□□□□ -1.45
PCDHB1Q9Y5F3 RNASE2-201ENST00000304625 755 ntAPPRIS P1 TSL 1 (best) BASIC5.98□□□□□ -1.45
PCDHB1Q9Y5F3 ANKRD36P1-201ENST00000344424 659 ntBASIC5.98□□□□□ -1.45
PCDHB1Q9Y5F3 RNU4-68P-201ENST00000364314 141 ntBASIC5.98□□□□□ -1.45
PCDHB1Q9Y5F3 S100G-201ENST00000380200 455 ntAPPRIS P1 TSL 1 (best) BASIC5.98□□□□□ -1.45
PCDHB1Q9Y5F3 AC119751.3-201ENST00000399720 670 ntBASIC5.98□□□□□ -1.45
PCDHB1Q9Y5F3 CoTC_ribozyme.1-201ENST00000408104 192 ntBASIC5.98□□□□□ -1.45
PCDHB1Q9Y5F3 AL391839.1-201ENST00000417447 265 ntTSL 2 BASIC5.98□□□□□ -1.45
PCDHB1Q9Y5F3 OR2X1P-201ENST00000421144 687 ntBASIC5.98□□□□□ -1.45
PCDHB1Q9Y5F3 AC013401.1-202ENST00000422017 626 ntTSL 2 BASIC5.98□□□□□ -1.45
PCDHB1Q9Y5F3 FRMPD4-AS1-201ENST00000425057 285 ntTSL 3 BASIC5.98□□□□□ -1.45
PCDHB1Q9Y5F3 ICA1L-210ENST00000425178 879 ntTSL 1 (best) BASIC5.98□□□□□ -1.45
PCDHB1Q9Y5F3 RPS4XP16-201ENST00000427198 791 ntBASIC5.98□□□□□ -1.45
PCDHB1Q9Y5F3 AP000146.1-202ENST00000441666 441 ntTSL 3 BASIC5.98□□□□□ -1.45
PCDHB1Q9Y5F3 OSBPL10-AS1-205ENST00000444503 526 ntTSL 4 BASIC5.98□□□□□ -1.45
PCDHB1Q9Y5F3 LINC01309-201ENST00000444795 492 ntTSL 3 BASIC5.98□□□□□ -1.45
PCDHB1Q9Y5F3 RPL34P26-201ENST00000445636 354 ntBASIC5.98□□□□□ -1.45
PCDHB1Q9Y5F3 CASP12-206ENST00000446862 1196 ntTSL 1 (best) BASIC5.98□□□□□ -1.45
PCDHB1Q9Y5F3 AC132807.1-201ENST00000449613 458 ntTSL 3 BASIC5.98□□□□□ -1.45
PCDHB1Q9Y5F3 AL451063.1-201ENST00000450164 1133 ntBASIC5.98□□□□□ -1.45
PCDHB1Q9Y5F3 PTGES3P5-201ENST00000455109 434 ntBASIC5.98□□□□□ -1.45
PCDHB1Q9Y5F3 PCDH9-AS4-201ENST00000456459 436 ntTSL 3 BASIC5.98□□□□□ -1.45
PCDHB1Q9Y5F3 AL157777.1-201ENST00000468100 304 ntBASIC5.98□□□□□ -1.45
PCDHB1Q9Y5F3 RPS12P31-201ENST00000491419 398 ntBASIC5.98□□□□□ -1.45
PCDHB1Q9Y5F3 RN7SL193P-201ENST00000491708 276 ntBASIC5.98□□□□□ -1.45
PCDHB1Q9Y5F3 LINC02231-201ENST00000510459 447 ntTSL 3 BASIC5.98□□□□□ -1.45
PCDHB1Q9Y5F3 AC112191.2-201ENST00000522428 333 ntBASIC5.98□□□□□ -1.45
PCDHB1Q9Y5F3 HMGB1P1-201ENST00000522557 636 ntBASIC5.98□□□□□ -1.45
PCDHB1Q9Y5F3 AP001893.1-201ENST00000532866 362 ntTSL 5 BASIC5.98□□□□□ -1.45
PCDHB1Q9Y5F3 LINC02441-201ENST00000543651 552 ntTSL 4 BASIC5.98□□□□□ -1.45
PCDHB1Q9Y5F3 AC022511.1-201ENST00000544089 476 ntTSL 2 BASIC5.98□□□□□ -1.45
PCDHB1Q9Y5F3 AC090503.1-201ENST00000548029 729 ntTSL 3 BASIC5.98□□□□□ -1.45
PCDHB1Q9Y5F3 INO80-AS1-201ENST00000558967 312 ntTSL 5 BASIC5.98□□□□□ -1.45
PCDHB1Q9Y5F3 AC022929.1-201ENST00000560675 823 ntTSL 3 BASIC5.98□□□□□ -1.45
PCDHB1Q9Y5F3 AC023824.3-201ENST00000569003 562 ntBASIC5.98□□□□□ -1.45
PCDHB1Q9Y5F3 STARD6-202ENST00000577499 696 ntTSL 2 BASIC5.98□□□□□ -1.45
PCDHB1Q9Y5F3 MIR4489-201ENST00000578869 62 ntBASIC5.98□□□□□ -1.45
PCDHB1Q9Y5F3 ZNF561-AS1-207ENST00000591932 676 ntTSL 5 BASIC5.98□□□□□ -1.45
PCDHB1Q9Y5F3 LINC01198-204ENST00000594153 552 ntTSL 3 BASIC5.98□□□□□ -1.45
PCDHB1Q9Y5F3 AC092070.1-201ENST00000600257 359 ntTSL 3 BASIC5.98□□□□□ -1.45
PCDHB1Q9Y5F3 AL049844.2-201ENST00000604280 628 ntBASIC5.98□□□□□ -1.45
PCDHB1Q9Y5F3 AC005377.1-201ENST00000605126 456 ntBASIC5.98□□□□□ -1.45
PCDHB1Q9Y5F3 AC008280.3-201ENST00000606436 732 ntTSL 5 BASIC5.98□□□□□ -1.45
PCDHB1Q9Y5F3 AC242426.3-203ENST00000606757 712 ntTSL 3 BASIC5.98□□□□□ -1.45
PCDHB1Q9Y5F3 RN7SL787P-201ENST00000613000 284 ntBASIC5.98□□□□□ -1.45
PCDHB1Q9Y5F3 AL121890.3-201ENST00000618494 516 ntBASIC5.98□□□□□ -1.45
PCDHB1Q9Y5F3 AC073569.3-201ENST00000619055 682 ntBASIC5.98□□□□□ -1.45
PCDHB1Q9Y5F3 AC241377.1-201ENST00000619797 406 ntBASIC5.98□□□□□ -1.45
PCDHB1Q9Y5F3 C1orf195-202ENST00000625027 441 ntTSL 5 BASIC5.98□□□□□ -1.45
PCDHB1Q9Y5F3 PCBP1-AS1-282ENST00000625783 826 ntTSL 5 BASIC5.98□□□□□ -1.45
PCDHB1Q9Y5F3 AC012564.1-201ENST00000636802 557 ntTSL 4 BASIC5.98□□□□□ -1.45
PCDHB1Q9Y5F3 AC015689.2-201ENST00000528172 1738 ntBASIC5.98□□□□□ -1.45
PCDHB1Q9Y5F3 CAPRIN2-202ENST00000395805 4156 ntTSL 1 (best) BASIC5.98□□□□□ -1.45
PCDHB1Q9Y5F3 DNHD1-201ENST00000254579 14862 ntAPPRIS P1 TSL 5 BASIC5.98□□□□□ -1.45
PCDHB1Q9Y5F3 LRRN3-201ENST00000308478 3099 ntAPPRIS P1 TSL 1 (best) BASIC5.98□□□□□ -1.45
PCDHB1Q9Y5F3 ZNF266-207ENST00000592904 4401 ntAPPRIS P1 TSL 1 (best) BASIC5.98□□□□□ -1.45
PCDHB1Q9Y5F3 STYX-202ENST00000442123 4554 ntAPPRIS P1 TSL 1 (best) BASIC5.98□□□□□ -1.45
PCDHB1Q9Y5F3 EXD1-201ENST00000314992 2942 ntAPPRIS P3 TSL 1 (best) BASIC5.98□□□□□ -1.45
PCDHB1Q9Y5F3 SEMA3A-201ENST00000265362 8225 ntAPPRIS P1 TSL 1 (best) BASIC5.98□□□□□ -1.45
PCDHB1Q9Y5F3 EED-203ENST00000351625 1696 ntTSL 1 (best) BASIC5.98□□□□□ -1.45
PCDHB1Q9Y5F3 HECTD4-211ENST00000550722 15450 ntAPPRIS ALT2 TSL 5 BASIC5.97□□□□□ -1.45
PCDHB1Q9Y5F3 AC099673.1-201ENST00000452199 2296 ntTSL 2 BASIC5.97□□□□□ -1.45
PCDHB1Q9Y5F3 IKZF3-210ENST00000377958 1837 ntTSL 1 (best) BASIC5.97□□□□□ -1.45
PCDHB1Q9Y5F3 TOX3-202ENST00000407228 3124 ntAPPRIS ALT2 TSL 2 BASIC5.97□□□□□ -1.45
PCDHB1Q9Y5F3 AL080276.2-201ENST00000637995 2090 ntTSL 3 BASIC5.97□□□□□ -1.45
PCDHB1Q9Y5F3 LINC02183-201ENST00000637822 1732 ntTSL 5 BASIC5.97□□□□□ -1.45
PCDHB1Q9Y5F3 VEZF1-204ENST00000584396 2342 ntAPPRIS ALT2 TSL 5 BASIC5.97□□□□□ -1.45
PCDHB1Q9Y5F3 NDRG3-202ENST00000359675 2917 ntAPPRIS ALT1 TSL 1 (best) BASIC5.97□□□□□ -1.45
PCDHB1Q9Y5F3 AC073365.1-203ENST00000641055 1992 ntBASIC5.97□□□□□ -1.45
PCDHB1Q9Y5F3 GNG2-212ENST00000556752 3424 ntAPPRIS P1 TSL 1 (best) BASIC5.97□□□□□ -1.45
PCDHB1Q9Y5F3 EXTL2-201ENST00000370113 2835 ntAPPRIS P1 TSL 1 (best) BASIC5.97□□□□□ -1.45
PCDHB1Q9Y5F3 OR5AS1-202ENST00000641320 7860 ntAPPRIS P1 BASIC5.97□□□□□ -1.45
PCDHB1Q9Y5F3 LINC02153-202ENST00000522604 1644 ntTSL 2 BASIC5.97□□□□□ -1.45
PCDHB1Q9Y5F3 HMMR-202ENST00000358715 2988 ntAPPRIS P4 TSL 1 (best) BASIC5.97□□□□□ -1.45
PCDHB1Q9Y5F3 OR14A2-201ENST00000366485 945 ntAPPRIS P1 BASIC5.97□□□□□ -1.45
PCDHB1Q9Y5F3 GNG5P2-201ENST00000372054 207 ntBASIC5.97□□□□□ -1.45
PCDHB1Q9Y5F3 MIR513B-201ENST00000385136 84 ntBASIC5.97□□□□□ -1.45
PCDHB1Q9Y5F3 KRTAP29-1-201ENST00000391353 1026 ntAPPRIS P1 BASIC5.97□□□□□ -1.45
PCDHB1Q9Y5F3 C6orf48-208ENST00000395788 815 ntAPPRIS P1 TSL 2 BASIC5.97□□□□□ -1.45
PCDHB1Q9Y5F3 RPL23AP59-201ENST00000399415 461 ntBASIC5.97□□□□□ -1.45
PCDHB1Q9Y5F3 RN7SKP286-201ENST00000410894 299 ntBASIC5.97□□□□□ -1.45
PCDHB1Q9Y5F3 AL513325.1-201ENST00000417716 1034 ntBASIC5.97□□□□□ -1.45
PCDHB1Q9Y5F3 LINC01347-201ENST00000417964 355 ntBASIC5.97□□□□□ -1.45
PCDHB1Q9Y5F3 AC079760.2-203ENST00000418395 489 ntTSL 3 BASIC5.97□□□□□ -1.45
PCDHB1Q9Y5F3 AC245884.2-201ENST00000426257 404 ntBASIC5.97□□□□□ -1.45
PCDHB1Q9Y5F3 HIGD1AP4-201ENST00000430194 280 ntBASIC5.97□□□□□ -1.45
PCDHB1Q9Y5F3 MTND5P25-201ENST00000430499 799 ntBASIC5.97□□□□□ -1.45
PCDHB1Q9Y5F3 AC117944.1-201ENST00000430748 641 ntTSL 3 BASIC5.97□□□□□ -1.45
PCDHB1Q9Y5F3 HNRNPA1P18-201ENST00000433537 927 ntBASIC5.97□□□□□ -1.45
PCDHB1Q9Y5F3 NDUFS5P5-201ENST00000437256 321 ntBASIC5.97□□□□□ -1.45
PCDHB1Q9Y5F3 PCBP2P1-201ENST00000437262 977 ntBASIC5.97□□□□□ -1.45
PCDHB1Q9Y5F3 AC073052.1-201ENST00000440417 714 ntBASIC5.97□□□□□ -1.45
PCDHB1Q9Y5F3 AL592437.1-201ENST00000443781 492 ntBASIC5.97□□□□□ -1.45
PCDHB1Q9Y5F3 AF127577.1-201ENST00000446301 562 ntTSL 3 BASIC5.97□□□□□ -1.45
Retrieved 100 of 98,524 protein–RNA pairs in 105.2 ms