Protein–RNA interactions for Protein: Q9UI47

CTNNA3, Catenin alpha-3, humanhuman

Predictions only

Length 895 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA3Q9UI47 AC004889.1-208ENST00000489077 423 ntTSL 3 BASIC6.28□□□□□ -1.4
CTNNA3Q9UI47 AC012400.1-201ENST00000518452 381 ntBASIC6.28□□□□□ -1.4
CTNNA3Q9UI47 AC110275.1-201ENST00000534420 623 ntAPPRIS P1 TSL 4 BASIC6.28□□□□□ -1.4
CTNNA3Q9UI47 PCED1B-AS1-210ENST00000552975 378 ntTSL 2 BASIC6.28□□□□□ -1.4
CTNNA3Q9UI47 MIR762HG-201ENST00000564901 648 ntTSL 2 BASIC6.28□□□□□ -1.4
CTNNA3Q9UI47 AC106730.2-201ENST00000566641 540 ntBASIC6.28□□□□□ -1.4
CTNNA3Q9UI47 AC011626.1-201ENST00000604710 562 ntBASIC6.28□□□□□ -1.4
CTNNA3Q9UI47 MIR6839-201ENST00000620425 113 ntBASIC6.28□□□□□ -1.4
CTNNA3Q9UI47 FRG1EP-201ENST00000634469 770 ntBASIC6.28□□□□□ -1.4
CTNNA3Q9UI47 VWC2L-202ENST00000427124 4480 ntTSL 1 (best) BASIC6.28□□□□□ -1.4
CTNNA3Q9UI47 HEMGN-202ENST00000616898 2305 ntAPPRIS P1 TSL 1 (best) BASIC6.28□□□□□ -1.4
CTNNA3Q9UI47 CASP1-208ENST00000527979 1521 ntTSL 5 BASIC6.28□□□□□ -1.4
CTNNA3Q9UI47 AC105411.1-201ENST00000568776 1470 ntTSL 4 BASIC6.28□□□□□ -1.4
CTNNA3Q9UI47 PWRN2-202ENST00000567246 4295 ntTSL 1 (best) BASIC6.28□□□□□ -1.4
CTNNA3Q9UI47 PARD3B-212ENST00000613457 7559 ntTSL 5 BASIC6.27□□□□□ -1.4
CTNNA3Q9UI47 EFCAB5-201ENST00000394835 5132 ntAPPRIS P2 TSL 1 (best) BASIC6.27□□□□□ -1.41
CTNNA3Q9UI47 RIF1-203ENST00000428287 7722 ntAPPRIS ALT2 TSL 1 (best) BASIC6.27□□□□□ -1.41
CTNNA3Q9UI47 ATRX-202ENST00000395603 10218 ntAPPRIS ALT2 TSL 1 (best) BASIC6.27□□□□□ -1.41
CTNNA3Q9UI47 ZNF790-201ENST00000356725 3037 ntAPPRIS P1 TSL 2 BASIC6.27□□□□□ -1.41
CTNNA3Q9UI47 NLRC4-203ENST00000402280 3355 ntAPPRIS P1 TSL 1 (best) BASIC6.27□□□□□ -1.41
CTNNA3Q9UI47 SAMSN1-206ENST00000619120 2028 ntTSL 1 (best) BASIC6.27□□□□□ -1.41
CTNNA3Q9UI47 SSMEM1-201ENST00000297819 1159 ntAPPRIS P1 TSL 1 (best) BASIC6.27□□□□□ -1.41
CTNNA3Q9UI47 TEX11-201ENST00000344304 2977 ntAPPRIS P3 TSL 5 BASIC6.27□□□□□ -1.41
CTNNA3Q9UI47 RN7SKP115-201ENST00000363177 317 ntBASIC6.27□□□□□ -1.41
CTNNA3Q9UI47 MIR589-201ENST00000385238 99 ntBASIC6.27□□□□□ -1.41
CTNNA3Q9UI47 LINC00276-201ENST00000417751 596 ntTSL 2 BASIC6.27□□□□□ -1.41
CTNNA3Q9UI47 AL592078.1-201ENST00000421866 321 ntTSL 3 BASIC6.27□□□□□ -1.41
CTNNA3Q9UI47 AL139148.1-201ENST00000427122 680 ntBASIC6.27□□□□□ -1.41
CTNNA3Q9UI47 TNKS2-AS1-201ENST00000432246 609 ntTSL 2 BASIC6.27□□□□□ -1.41
CTNNA3Q9UI47 H2AFZP6-201ENST00000444403 394 ntBASIC6.27□□□□□ -1.41
CTNNA3Q9UI47 AL161629.1-201ENST00000446201 457 ntTSL 3 BASIC6.27□□□□□ -1.41
CTNNA3Q9UI47 OTX2P1-201ENST00000450956 354 ntBASIC6.27□□□□□ -1.41
CTNNA3Q9UI47 Z92846.1-201ENST00000456203 268 ntBASIC6.27□□□□□ -1.41
CTNNA3Q9UI47 RN7SL189P-201ENST00000468631 289 ntBASIC6.27□□□□□ -1.41
CTNNA3Q9UI47 AC004453.1-201ENST00000487895 408 ntBASIC6.27□□□□□ -1.41
CTNNA3Q9UI47 AC015864.1-201ENST00000496512 544 ntBASIC6.27□□□□□ -1.41
CTNNA3Q9UI47 ENPP7P11-201ENST00000505915 627 ntBASIC6.27□□□□□ -1.41
CTNNA3Q9UI47 AC084871.1-201ENST00000508020 628 ntTSL 3 BASIC6.27□□□□□ -1.41
CTNNA3Q9UI47 CPSF7-220ENST00000541963 549 ntTSL 4 BASIC6.27□□□□□ -1.41
CTNNA3Q9UI47 AL161757.4-204ENST00000557136 834 ntTSL 3 BASIC6.27□□□□□ -1.41
CTNNA3Q9UI47 C15orf41-205ENST00000563167 772 ntTSL 3 BASIC6.27□□□□□ -1.41
CTNNA3Q9UI47 RN7SL708P-201ENST00000580952 299 ntBASIC6.27□□□□□ -1.41
CTNNA3Q9UI47 AC005244.2-201ENST00000585228 718 ntTSL 3 BASIC6.27□□□□□ -1.41
CTNNA3Q9UI47 LINC01862-201ENST00000593792 478 ntTSL 2 BASIC6.27□□□□□ -1.41
CTNNA3Q9UI47 AC008814.1-201ENST00000603797 406 ntBASIC6.27□□□□□ -1.41
CTNNA3Q9UI47 AC002128.2-201ENST00000604161 618 ntTSL 5 BASIC6.27□□□□□ -1.41
CTNNA3Q9UI47 AC024940.4-201ENST00000605507 246 ntBASIC6.27□□□□□ -1.41
CTNNA3Q9UI47 AC090527.3-201ENST00000619041 548 ntBASIC6.27□□□□□ -1.41
CTNNA3Q9UI47 WWOX-217ENST00000620008 450 ntTSL 2 BASIC6.27□□□□□ -1.41
CTNNA3Q9UI47 AC010809.3-201ENST00000621310 641 ntBASIC6.27□□□□□ -1.41
CTNNA3Q9UI47 AC135068.12-201ENST00000637370 931 ntBASIC6.27□□□□□ -1.41
CTNNA3Q9UI47 SOX5-216ENST00000546136 6975 ntAPPRIS P3 TSL 5 BASIC6.27□□□□□ -1.41
CTNNA3Q9UI47 GRID2-208ENST00000611049 4844 ntTSL 1 (best) BASIC6.27□□□□□ -1.41
CTNNA3Q9UI47 CASC17-201ENST00000569074 2059 ntTSL 1 (best) BASIC6.27□□□□□ -1.41
CTNNA3Q9UI47 CDC27P2-201ENST00000425026 1922 ntBASIC6.27□□□□□ -1.41
CTNNA3Q9UI47 EEF1A1-210ENST00000610520 3447 ntTSL 5 BASIC6.27□□□□□ -1.41
CTNNA3Q9UI47 AC097063.1-201ENST00000426714 1797 ntBASIC6.26□□□□□ -1.41
CTNNA3Q9UI47 SRRM1-202ENST00000374389 3110 ntAPPRIS ALT2 TSL 5 BASIC6.26□□□□□ -1.41
CTNNA3Q9UI47 AC006210.2-201ENST00000367074 1545 ntBASIC6.26□□□□□ -1.41
CTNNA3Q9UI47 USP45-204ENST00000369233 2514 ntTSL 5 BASIC6.26□□□□□ -1.41
CTNNA3Q9UI47 OR8B3-202ENST00000641139 2170 ntAPPRIS P1 BASIC6.26□□□□□ -1.41
CTNNA3Q9UI47 AC091045.1-201ENST00000561460 2277 ntTSL 5 BASIC6.26□□□□□ -1.41
CTNNA3Q9UI47 PAGE2B-202ENST00000374974 456 ntTSL 5 BASIC6.26□□□□□ -1.41
CTNNA3Q9UI47 RPL35AP24-201ENST00000413846 330 ntBASIC6.26□□□□□ -1.41
CTNNA3Q9UI47 LINC01589-201ENST00000422971 548 ntTSL 1 (best) BASIC6.26□□□□□ -1.41
CTNNA3Q9UI47 LINC01889-201ENST00000430692 668 ntTSL 5 BASIC6.26□□□□□ -1.41
CTNNA3Q9UI47 AL450384.1-201ENST00000433526 413 ntTSL 2 BASIC6.26□□□□□ -1.41
CTNNA3Q9UI47 EEF1B2P5-201ENST00000444820 548 ntBASIC6.26□□□□□ -1.41
CTNNA3Q9UI47 AP001439.1-201ENST00000455275 392 ntTSL 2 BASIC6.26□□□□□ -1.41
CTNNA3Q9UI47 AC104831.1-201ENST00000470024 444 ntTSL 3 BASIC6.26□□□□□ -1.41
CTNNA3Q9UI47 RPS4XP1-201ENST00000482189 787 ntBASIC6.26□□□□□ -1.41
CTNNA3Q9UI47 RN7SL814P-201ENST00000487715 300 ntBASIC6.26□□□□□ -1.41
CTNNA3Q9UI47 AC115622.1-201ENST00000509628 587 ntTSL 3 BASIC6.26□□□□□ -1.41
CTNNA3Q9UI47 GTF2F2P1-201ENST00000511083 675 ntBASIC6.26□□□□□ -1.41
CTNNA3Q9UI47 AP001085.1-201ENST00000524441 639 ntTSL 2 BASIC6.26□□□□□ -1.41
CTNNA3Q9UI47 AL355076.2-201ENST00000555736 544 ntTSL 5 BASIC6.26□□□□□ -1.41
CTNNA3Q9UI47 AC004448.4-204ENST00000585389 743 ntTSL 5 BASIC6.26□□□□□ -1.41
CTNNA3Q9UI47 AC104365.1-202ENST00000587080 398 ntTSL 3 BASIC6.26□□□□□ -1.41
CTNNA3Q9UI47 LINC01676-204ENST00000595309 871 ntTSL 5 BASIC6.26□□□□□ -1.41
CTNNA3Q9UI47 AC010618.3-202ENST00000598141 476 ntTSL 3 BASIC6.26□□□□□ -1.41
CTNNA3Q9UI47 AL353770.4-201ENST00000614936 468 ntTSL 5 BASIC6.26□□□□□ -1.41
CTNNA3Q9UI47 AL590491.2-203ENST00000614969 468 ntTSL 4 BASIC6.26□□□□□ -1.41
CTNNA3Q9UI47 AC068870.2-201ENST00000620635 389 ntBASIC6.26□□□□□ -1.41
CTNNA3Q9UI47 AC072062.1-209ENST00000627336 772 ntTSL 5 BASIC6.26□□□□□ -1.41
CTNNA3Q9UI47 AC093495.1-217ENST00000627385 428 ntTSL 5 BASIC6.26□□□□□ -1.41
CTNNA3Q9UI47 SEC31A-201ENST00000264405 3447 ntTSL 2 BASIC6.26□□□□□ -1.41
CTNNA3Q9UI47 RPGRIP1L-212ENST00000621565 6038 ntAPPRIS ALT1 TSL 1 (best) BASIC6.26□□□□□ -1.41
CTNNA3Q9UI47 PEAK1-201ENST00000312493 11512 ntAPPRIS P1 TSL 5 BASIC6.26□□□□□ -1.41
CTNNA3Q9UI47 ZNF83-203ENST00000541777 3743 ntAPPRIS P1 TSL 1 (best) BASIC6.26□□□□□ -1.41
CTNNA3Q9UI47 ITCH-201ENST00000262650 3089 ntTSL 1 (best) BASIC6.26□□□□□ -1.41
CTNNA3Q9UI47 RNF217-201ENST00000359704 1784 ntTSL 1 (best) BASIC6.26□□□□□ -1.41
CTNNA3Q9UI47 DYNC1I2-207ENST00000410079 2159 ntTSL 2 BASIC6.25□□□□□ -1.41
CTNNA3Q9UI47 AC093849.1-201ENST00000563631 2209 ntBASIC6.25□□□□□ -1.41
CTNNA3Q9UI47 DNAH12-203ENST00000389536 2613 ntTSL 5 BASIC6.25□□□□□ -1.41
CTNNA3Q9UI47 AP005212.5-201ENST00000577614 3505 ntTSL 5 BASIC6.25□□□□□ -1.41
CTNNA3Q9UI47 TAAR1-201ENST00000275216 1020 ntAPPRIS P1 BASIC6.25□□□□□ -1.41
CTNNA3Q9UI47 U3.3-201ENST00000362986 216 ntBASIC6.25□□□□□ -1.41
CTNNA3Q9UI47 RNA5SP90-201ENST00000364801 99 ntBASIC6.25□□□□□ -1.41
CTNNA3Q9UI47 RNU1-74P-201ENST00000384108 171 ntBASIC6.25□□□□□ -1.41
CTNNA3Q9UI47 NUDT19P3-201ENST00000404698 555 ntBASIC6.25□□□□□ -1.41
Retrieved 100 of 98,524 protein–RNA pairs in 132.2 ms