Protein–RNA interactions for Protein: Q9UDT6

CLIP2, CAP-Gly domain-containing linker protein 2, humanhuman

Predictions only

Length 1,046 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP2Q9UDT6 RUFY3-201ENST00000226328 4233 ntTSL 1 (best) BASIC6.19□□□□□ -1.42
CLIP2Q9UDT6 TOPORSLP1-201ENST00000467693 2102 ntBASIC6.19□□□□□ -1.42
CLIP2Q9UDT6 GTDC1-220ENST00000618778 2317 ntTSL 5 BASIC6.19□□□□□ -1.42
CLIP2Q9UDT6 ADAM29-213ENST00000615367 3386 ntAPPRIS P1 TSL 5 BASIC6.18□□□□□ -1.42
CLIP2Q9UDT6 ADGRL2-209ENST00000370727 5164 ntTSL 5 BASIC6.18□□□□□ -1.42
CLIP2Q9UDT6 ZNF83-203ENST00000541777 3743 ntAPPRIS P1 TSL 1 (best) BASIC6.18□□□□□ -1.42
CLIP2Q9UDT6 ZNF534-202ENST00000332323 2086 ntAPPRIS P4 TSL 1 (best) BASIC6.18□□□□□ -1.42
CLIP2Q9UDT6 AC092747.4-201ENST00000620519 1861 ntBASIC6.18□□□□□ -1.42
CLIP2Q9UDT6 AC008691.1-207ENST00000636819 4154 ntTSL 5 BASIC6.18□□□□□ -1.42
CLIP2Q9UDT6 RGS17-202ENST00000367225 7773 ntAPPRIS P1 TSL 1 (best) BASIC6.18□□□□□ -1.42
CLIP2Q9UDT6 RGS6-204ENST00000404301 1497 ntAPPRIS ALT1 TSL 1 (best) BASIC6.18□□□□□ -1.42
CLIP2Q9UDT6 RGS6-206ENST00000407322 1497 ntAPPRIS ALT1 TSL 1 (best) BASIC6.18□□□□□ -1.42
CLIP2Q9UDT6 SSMEM1-201ENST00000297819 1159 ntAPPRIS P1 TSL 1 (best) BASIC6.18□□□□□ -1.42
CLIP2Q9UDT6 SPRR2G-201ENST00000368748 568 ntAPPRIS P1 TSL 1 (best) BASIC6.18□□□□□ -1.42
CLIP2Q9UDT6 PRR21-201ENST00000408934 1170 ntAPPRIS P1 BASIC6.18□□□□□ -1.42
CLIP2Q9UDT6 PPP3R1-203ENST00000409752 851 ntTSL 3 BASIC6.18□□□□□ -1.42
CLIP2Q9UDT6 SMIM2-IT1-201ENST00000415082 478 ntTSL 3 BASIC6.18□□□□□ -1.42
CLIP2Q9UDT6 AC096711.3-201ENST00000420721 582 ntTSL 4 BASIC6.18□□□□□ -1.42
CLIP2Q9UDT6 FSIP2-AS1-201ENST00000429929 440 ntTSL 3 BASIC6.18□□□□□ -1.42
CLIP2Q9UDT6 LINC02532-206ENST00000433965 570 ntTSL 2 BASIC6.18□□□□□ -1.42
CLIP2Q9UDT6 AL354863.1-204ENST00000436430 556 ntTSL 3 BASIC6.18□□□□□ -1.42
CLIP2Q9UDT6 FSIP2-AS1-202ENST00000436557 689 ntTSL 3 BASIC6.18□□□□□ -1.42
CLIP2Q9UDT6 AC092637.1-201ENST00000444745 510 ntTSL 5 BASIC6.18□□□□□ -1.42
CLIP2Q9UDT6 RNU7-157P-201ENST00000459600 66 ntBASIC6.18□□□□□ -1.42
CLIP2Q9UDT6 CBX1P5-201ENST00000475330 559 ntBASIC6.18□□□□□ -1.42
CLIP2Q9UDT6 LINC02499-201ENST00000502291 763 ntTSL 3 BASIC6.18□□□□□ -1.42
CLIP2Q9UDT6 AC145141.1-201ENST00000510180 567 ntTSL 4 BASIC6.18□□□□□ -1.42
CLIP2Q9UDT6 RNU6ATAC24P-201ENST00000516811 135 ntBASIC6.18□□□□□ -1.42
CLIP2Q9UDT6 AP003354.2-201ENST00000517983 563 ntTSL 4 BASIC6.18□□□□□ -1.42
CLIP2Q9UDT6 BAALC-AS1-205ENST00000521102 613 ntTSL 3 BASIC6.18□□□□□ -1.42
CLIP2Q9UDT6 CASC19-203ENST00000523510 575 ntTSL 3 BASIC6.18□□□□□ -1.42
CLIP2Q9UDT6 AC130364.2-201ENST00000528639 604 ntBASIC6.18□□□□□ -1.42
CLIP2Q9UDT6 AC002563.1-201ENST00000535109 451 ntTSL 3 BASIC6.18□□□□□ -1.42
CLIP2Q9UDT6 C8orf59-206ENST00000545322 491 ntTSL 3 BASIC6.18□□□□□ -1.42
CLIP2Q9UDT6 TWF1-207ENST00000548315 1170 ntTSL 1 (best) BASIC6.18□□□□□ -1.42
CLIP2Q9UDT6 LINC01619-209ENST00000552277 571 ntTSL 4 BASIC6.18□□□□□ -1.42
CLIP2Q9UDT6 AC114947.2-201ENST00000565748 2125 ntBASIC6.18□□□□□ -1.42
CLIP2Q9UDT6 AC142086.4-201ENST00000568904 650 ntTSL 3 BASIC6.18□□□□□ -1.42
CLIP2Q9UDT6 AC016747.2-201ENST00000605902 364 ntTSL 2 BASIC6.18□□□□□ -1.42
CLIP2Q9UDT6 MIR4435-2HG-220ENST00000609902 603 ntTSL 3 BASIC6.18□□□□□ -1.42
CLIP2Q9UDT6 AC068870.2-201ENST00000620635 389 ntBASIC6.18□□□□□ -1.42
CLIP2Q9UDT6 AC099494.2-201ENST00000623371 978 ntBASIC6.18□□□□□ -1.42
CLIP2Q9UDT6 PCDHB2-203ENST00000624874 565 ntTSL 5 BASIC6.18□□□□□ -1.42
CLIP2Q9UDT6 AC093495.1-217ENST00000627385 428 ntTSL 5 BASIC6.18□□□□□ -1.42
CLIP2Q9UDT6 AL138820.1-201ENST00000617901 5305 ntBASIC6.18□□□□□ -1.42
CLIP2Q9UDT6 SYTL2-204ENST00000389958 1943 ntTSL 2 BASIC6.18□□□□□ -1.42
CLIP2Q9UDT6 LRP1B-201ENST00000389484 16535 ntAPPRIS P1 TSL 1 (best) BASIC6.18□□□□□ -1.42
CLIP2Q9UDT6 ZFP14-201ENST00000270001 7489 ntAPPRIS P1 TSL 1 (best) BASIC6.18□□□□□ -1.42
CLIP2Q9UDT6 SRSF11-201ENST00000370949 3034 ntTSL 1 (best) BASIC6.17□□□□□ -1.42
CLIP2Q9UDT6 SLC4A7-206ENST00000428386 7385 ntTSL 1 (best) BASIC6.17□□□□□ -1.42
CLIP2Q9UDT6 FGF1-215ENST00000619447 3818 ntAPPRIS P1 TSL 4 BASIC6.17□□□□□ -1.42
CLIP2Q9UDT6 MFAP1-201ENST00000267812 2155 ntAPPRIS P1 TSL 1 (best) BASIC6.17□□□□□ -1.42
CLIP2Q9UDT6 AK9-204ENST00000424296 6326 ntAPPRIS P1 TSL 5 BASIC6.17□□□□□ -1.42
CLIP2Q9UDT6 AC092111.3-201ENST00000402465 496 ntAPPRIS P1 TSL 2 BASIC6.17□□□□□ -1.42
CLIP2Q9UDT6 LINC00342-201ENST00000412393 654 ntTSL 3 BASIC6.17□□□□□ -1.42
CLIP2Q9UDT6 SMC4P1-201ENST00000414479 527 ntBASIC6.17□□□□□ -1.42
CLIP2Q9UDT6 AC093162.1-201ENST00000419682 124 ntBASIC6.17□□□□□ -1.42
CLIP2Q9UDT6 AC002064.2-201ENST00000420245 289 ntTSL 3 BASIC6.17□□□□□ -1.42
CLIP2Q9UDT6 AC006455.6-201ENST00000426192 893 ntBASIC6.17□□□□□ -1.42
CLIP2Q9UDT6 PSMD10P3-201ENST00000437000 448 ntBASIC6.17□□□□□ -1.42
CLIP2Q9UDT6 AC073850.1-201ENST00000449243 255 ntBASIC6.17□□□□□ -1.42
CLIP2Q9UDT6 OTX2P1-201ENST00000450956 354 ntBASIC6.17□□□□□ -1.42
CLIP2Q9UDT6 C2orf80-206ENST00000451346 979 ntTSL 5 BASIC6.17□□□□□ -1.42
CLIP2Q9UDT6 SBDSP1-204ENST00000453858 737 ntBASIC6.17□□□□□ -1.42
CLIP2Q9UDT6 AC090114.3-201ENST00000479267 829 ntBASIC6.17□□□□□ -1.42
CLIP2Q9UDT6 AC109462.1-201ENST00000491087 368 ntBASIC6.17□□□□□ -1.42
CLIP2Q9UDT6 ENPP7P11-201ENST00000505915 627 ntBASIC6.17□□□□□ -1.42
CLIP2Q9UDT6 GTF2F2P1-201ENST00000511083 675 ntBASIC6.17□□□□□ -1.42
CLIP2Q9UDT6 AC098976.1-201ENST00000513014 541 ntBASIC6.17□□□□□ -1.42
CLIP2Q9UDT6 AP003696.1-201ENST00000519337 770 ntTSL 3 BASIC6.17□□□□□ -1.42
CLIP2Q9UDT6 MGAT4C-206ENST00000552435 550 ntTSL 4 BASIC6.17□□□□□ -1.42
CLIP2Q9UDT6 ABHD15-AS1-201ENST00000581474 187 ntTSL 5 BASIC6.17□□□□□ -1.42
CLIP2Q9UDT6 AC004596.1-201ENST00000586560 528 ntTSL 3 BASIC6.17□□□□□ -1.42
CLIP2Q9UDT6 AC092683.1-203ENST00000594050 654 ntTSL 5 BASIC6.17□□□□□ -1.42
CLIP2Q9UDT6 AL356608.1-201ENST00000610034 820 ntBASIC6.17□□□□□ -1.42
CLIP2Q9UDT6 SHMT1-211ENST00000618902 378 ntTSL 5 BASIC6.17□□□□□ -1.42
CLIP2Q9UDT6 AC091932.2-201ENST00000623014 291 ntBASIC6.17□□□□□ -1.42
CLIP2Q9UDT6 STK31-201ENST00000354639 3596 ntTSL 1 (best) BASIC6.17□□□□□ -1.42
CLIP2Q9UDT6 PLEKHG7-201ENST00000344636 3868 ntTSL 5 BASIC6.17□□□□□ -1.42
CLIP2Q9UDT6 SMARCA2-206ENST00000382185 1584 ntTSL 2 BASIC6.17□□□□□ -1.42
CLIP2Q9UDT6 AC015813.1-203ENST00000585065 4722 ntTSL 2 BASIC6.17□□□□□ -1.42
CLIP2Q9UDT6 PRUNE2-201ENST00000223609 2697 ntTSL 2 BASIC6.17□□□□□ -1.42
CLIP2Q9UDT6 ZNF429-209ENST00000618549 1889 ntTSL 5 BASIC6.17□□□□□ -1.42
CLIP2Q9UDT6 HMMR-202ENST00000358715 2988 ntAPPRIS P4 TSL 1 (best) BASIC6.17□□□□□ -1.42
CLIP2Q9UDT6 HEMGN-202ENST00000616898 2305 ntAPPRIS P1 TSL 1 (best) BASIC6.16□□□□□ -1.42
CLIP2Q9UDT6 MAK-203ENST00000474039 3859 ntAPPRIS P1 TSL 1 (best) BASIC6.16□□□□□ -1.42
CLIP2Q9UDT6 NPSR1-AS1-202ENST00000419766 4821 ntTSL 1 (best) BASIC6.16□□□□□ -1.42
CLIP2Q9UDT6 C2CD6-202ENST00000439140 5512 ntAPPRIS ALT2 TSL 1 (best) BASIC6.16□□□□□ -1.42
CLIP2Q9UDT6 TMBIM4-201ENST00000286424 989 ntTSL 5 BASIC6.16□□□□□ -1.42
CLIP2Q9UDT6 RNASE9-201ENST00000338904 1049 ntAPPRIS P3 TSL 1 (best) BASIC6.16□□□□□ -1.42
CLIP2Q9UDT6 RNA5SP305-201ENST00000362665 119 ntBASIC6.16□□□□□ -1.42
CLIP2Q9UDT6 U3.3-201ENST00000362986 216 ntBASIC6.16□□□□□ -1.42
CLIP2Q9UDT6 AC002524.1-201ENST00000411687 547 ntBASIC6.16□□□□□ -1.42
CLIP2Q9UDT6 ATP6V1G1P7-201ENST00000415853 349 ntBASIC6.16□□□□□ -1.42
CLIP2Q9UDT6 AC022535.1-201ENST00000420082 691 ntTSL 3 BASIC6.16□□□□□ -1.42
CLIP2Q9UDT6 EI24P4-201ENST00000423683 1078 ntBASIC6.16□□□□□ -1.42
CLIP2Q9UDT6 Z82246.1-201ENST00000428201 457 ntTSL 2 BASIC6.16□□□□□ -1.42
CLIP2Q9UDT6 AC091685.1-201ENST00000442436 448 ntTSL 3 BASIC6.16□□□□□ -1.42
CLIP2Q9UDT6 AC092647.2-201ENST00000452998 253 ntBASIC6.16□□□□□ -1.42
CLIP2Q9UDT6 COX6B1P2-201ENST00000489624 230 ntBASIC6.16□□□□□ -1.42
Retrieved 100 of 98,524 protein–RNA pairs in 83.9 ms