Protein–RNA interactions for Protein: Q9NSE2

CISH, Cytokine-inducible SH2-containing protein, humanhuman

Predictions only

Length 258 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CISHQ9NSE2 MYNN-203ENST00000544106 4815 ntTSL 1 (best) BASIC5.36□□□□□ -1.55
CISHQ9NSE2 KSR2-202ENST00000425217 17008 ntTSL 5 BASIC5.36□□□□□ -1.55
CISHQ9NSE2 EXO1-201ENST00000348581 3192 ntAPPRIS P3 TSL 1 (best) BASIC5.35□□□□□ -1.55
CISHQ9NSE2 VCAM1-202ENST00000347652 2812 ntTSL 1 (best) BASIC5.35□□□□□ -1.55
CISHQ9NSE2 LINC00989-201ENST00000508174 2080 ntTSL 3 BASIC5.35□□□□□ -1.55
CISHQ9NSE2 SLCO1A2-212ENST00000458504 2008 ntTSL 2 BASIC5.35□□□□□ -1.55
CISHQ9NSE2 LINC00507-201ENST00000540882 1935 ntTSL 5 BASIC5.35□□□□□ -1.55
CISHQ9NSE2 CASC19-281ENST00000642118 1554 ntBASIC5.35□□□□□ -1.55
CISHQ9NSE2 AC115220.1-201ENST00000330020 1453 ntAPPRIS P1 TSL 3 BASIC5.35□□□□□ -1.55
CISHQ9NSE2 IREB2-201ENST00000258886 6354 ntAPPRIS P1 TSL 1 (best) BASIC5.35□□□□□ -1.55
CISHQ9NSE2 RNU4-4P-201ENST00000364588 130 ntBASIC5.35□□□□□ -1.55
CISHQ9NSE2 RNA5SP428-201ENST00000365129 132 ntBASIC5.35□□□□□ -1.55
CISHQ9NSE2 AL590609.3-201ENST00000411815 210 ntTSL 3 BASIC5.35□□□□□ -1.55
CISHQ9NSE2 AC079760.2-203ENST00000418395 489 ntTSL 3 BASIC5.35□□□□□ -1.55
CISHQ9NSE2 IGKV1OR9-1-201ENST00000424370 284 ntBASIC5.35□□□□□ -1.55
CISHQ9NSE2 MAGI2-AS3-204ENST00000426835 738 ntTSL 3 BASIC5.35□□□□□ -1.55
CISHQ9NSE2 AC008073.2-201ENST00000428344 792 ntTSL 5 BASIC5.35□□□□□ -1.55
CISHQ9NSE2 AC092811.1-201ENST00000428642 397 ntTSL 3 BASIC5.35□□□□□ -1.55
CISHQ9NSE2 AC090602.1-201ENST00000469695 252 ntBASIC5.35□□□□□ -1.55
CISHQ9NSE2 SNRPCP3-201ENST00000474888 476 ntBASIC5.35□□□□□ -1.55
CISHQ9NSE2 DEFB109A-201ENST00000482450 265 ntBASIC5.35□□□□□ -1.55
CISHQ9NSE2 OR5M14P-201ENST00000506803 618 ntBASIC5.35□□□□□ -1.55
CISHQ9NSE2 AC147055.3-201ENST00000510547 851 ntBASIC5.35□□□□□ -1.55
CISHQ9NSE2 RERG-AS1-201ENST00000541243 337 ntTSL 2 BASIC5.35□□□□□ -1.55
CISHQ9NSE2 AC138360.1-201ENST00000552332 386 ntTSL 3 BASIC5.35□□□□□ -1.55
CISHQ9NSE2 ARPP19-204ENST00000563277 955 ntTSL 2 BASIC5.35□□□□□ -1.55
CISHQ9NSE2 AC087763.1-201ENST00000603391 286 ntBASIC5.35□□□□□ -1.55
CISHQ9NSE2 LINC02112-204ENST00000606222 429 ntTSL 5 BASIC5.35□□□□□ -1.55
CISHQ9NSE2 AL157762.1-201ENST00000619612 415 ntBASIC5.35□□□□□ -1.55
CISHQ9NSE2 MIR6719-201ENST00000622428 87 ntBASIC5.35□□□□□ -1.55
CISHQ9NSE2 AP005432.1-201ENST00000580891 3485 ntBASIC5.35□□□□□ -1.55
CISHQ9NSE2 FAM35A-201ENST00000298784 3402 ntAPPRIS P1 TSL 2 BASIC5.35□□□□□ -1.55
CISHQ9NSE2 FASTKD2-201ENST00000236980 3188 ntAPPRIS P1 TSL 1 (best) BASIC5.35□□□□□ -1.55
CISHQ9NSE2 OR8H2-201ENST00000313503 3088 ntAPPRIS P2 BASIC5.35□□□□□ -1.55
CISHQ9NSE2 PCDH15-217ENST00000414778 9234 ntAPPRIS ALT2 TSL 5 BASIC5.35□□□□□ -1.55
CISHQ9NSE2 PCDH15-227ENST00000614895 9249 ntAPPRIS ALT2 TSL 5 BASIC5.35□□□□□ -1.55
CISHQ9NSE2 AC073136.1-201ENST00000449426 2884 ntBASIC5.35□□□□□ -1.55
CISHQ9NSE2 FANCI-201ENST00000300027 4713 ntAPPRIS P3 TSL 5 BASIC5.35□□□□□ -1.55
CISHQ9NSE2 DTNA-231ENST00000598774 2418 ntTSL 1 (best) BASIC5.35□□□□□ -1.55
CISHQ9NSE2 FLRT3-202ENST00000378053 4776 ntAPPRIS P1 TSL 1 (best) BASIC5.35□□□□□ -1.55
CISHQ9NSE2 NLRP11-202ENST00000589824 3231 ntAPPRIS ALT2 TSL 5 BASIC5.35□□□□□ -1.55
CISHQ9NSE2 SLC41A2-201ENST00000258538 4449 ntAPPRIS P1 TSL 1 (best) BASIC5.34□□□□□ -1.55
CISHQ9NSE2 AC011447.7-201ENST00000624228 1590 ntBASIC5.34□□□□□ -1.55
CISHQ9NSE2 DOCK10-202ENST00000409592 7288 ntAPPRIS ALT2 TSL 1 (best) BASIC5.34□□□□□ -1.55
CISHQ9NSE2 C9orf135-AS1-201ENST00000439418 1375 ntTSL 2 BASIC5.34□□□□□ -1.55
CISHQ9NSE2 OR5AU1-203ENST00000641697 7755 ntAPPRIS P1 BASIC5.34□□□□□ -1.55
CISHQ9NSE2 ELMO1-207ENST00000442504 3154 ntAPPRIS P1 TSL 2 BASIC5.34□□□□□ -1.55
CISHQ9NSE2 AC104623.2-202ENST00000623477 4002 ntBASIC5.34□□□□□ -1.55
CISHQ9NSE2 FAM46D-202ENST00000538312 3106 ntAPPRIS P1 TSL 2 BASIC5.34□□□□□ -1.55
CISHQ9NSE2 SDR42E1-201ENST00000328945 11566 ntAPPRIS P1 TSL 1 (best) BASIC5.34□□□□□ -1.55
CISHQ9NSE2 ST7-204ENST00000393444 2113 ntTSL 1 (best) BASIC5.34□□□□□ -1.55
CISHQ9NSE2 AC013442.1-201ENST00000397347 228 ntBASIC5.34□□□□□ -1.55
CISHQ9NSE2 AL078599.1-201ENST00000402075 293 ntBASIC5.34□□□□□ -1.55
CISHQ9NSE2 KCNIP1-205ENST00000434108 726 ntTSL 1 (best) BASIC5.34□□□□□ -1.55
CISHQ9NSE2 AC005518.1-201ENST00000448131 1116 ntTSL 2 BASIC5.34□□□□□ -1.55
CISHQ9NSE2 RPS17P2-201ENST00000461663 408 ntBASIC5.34□□□□□ -1.55
CISHQ9NSE2 RN7SL515P-201ENST00000463999 297 ntBASIC5.34□□□□□ -1.55
CISHQ9NSE2 RPL7AP6-201ENST00000477943 801 ntBASIC5.34□□□□□ -1.55
CISHQ9NSE2 RPL37AP8-201ENST00000494116 276 ntBASIC5.34□□□□□ -1.55
CISHQ9NSE2 LINC01151-201ENST00000521608 571 ntTSL 4 BASIC5.34□□□□□ -1.55
CISHQ9NSE2 AC104241.1-201ENST00000530039 628 ntTSL 3 BASIC5.34□□□□□ -1.55
CISHQ9NSE2 AC079089.1-204ENST00000530194 572 ntTSL 2 BASIC5.34□□□□□ -1.55
CISHQ9NSE2 AC006206.2-202ENST00000537714 648 ntTSL 5 BASIC5.34□□□□□ -1.55
CISHQ9NSE2 APPL2-203ENST00000546731 684 ntTSL 2 BASIC5.34□□□□□ -1.55
CISHQ9NSE2 AC066612.1-202ENST00000561094 518 ntTSL 5 BASIC5.34□□□□□ -1.55
CISHQ9NSE2 AC116553.2-201ENST00000564203 463 ntBASIC5.34□□□□□ -1.55
CISHQ9NSE2 EIF1P5-201ENST00000585002 234 ntBASIC5.34□□□□□ -1.55
CISHQ9NSE2 MEMO1P5-201ENST00000604810 406 ntBASIC5.34□□□□□ -1.55
CISHQ9NSE2 AC005377.1-201ENST00000605126 456 ntBASIC5.34□□□□□ -1.55
CISHQ9NSE2 BX005214.3-202ENST00000619809 325 ntBASIC5.34□□□□□ -1.55
CISHQ9NSE2 AP000648.2-201ENST00000624182 404 ntBASIC5.34□□□□□ -1.55
CISHQ9NSE2 AC002384.2-201ENST00000636036 790 ntTSL 3 BASIC5.34□□□□□ -1.55
CISHQ9NSE2 AC093671.1-201ENST00000624981 2929 ntBASIC5.34□□□□□ -1.55
CISHQ9NSE2 SPINK5-202ENST00000359874 3656 ntAPPRIS ALT2 TSL 1 (best) BASIC5.34□□□□□ -1.55
CISHQ9NSE2 LINC01951-201ENST00000377300 1925 ntTSL 2 BASIC5.34□□□□□ -1.55
CISHQ9NSE2 AKAP9-201ENST00000356239 12471 ntAPPRIS P2 TSL 1 (best) BASIC5.34□□□□□ -1.55
CISHQ9NSE2 OFD1P17-201ENST00000437639 3018 ntBASIC5.34□□□□□ -1.56
CISHQ9NSE2 VEZF1-204ENST00000584396 2342 ntAPPRIS ALT2 TSL 5 BASIC5.34□□□□□ -1.56
CISHQ9NSE2 MAP3K2-201ENST00000344908 2135 ntAPPRIS P1 TSL 1 (best) BASIC5.33□□□□□ -1.56
CISHQ9NSE2 AC139426.3-201ENST00000605648 2059 ntBASIC5.33□□□□□ -1.56
CISHQ9NSE2 TCF4-268ENST00000629387 3789 ntAPPRIS ALT1 TSL 5 BASIC5.33□□□□□ -1.56
CISHQ9NSE2 SYTL2-204ENST00000389958 1943 ntTSL 2 BASIC5.33□□□□□ -1.56
CISHQ9NSE2 FRYL-209ENST00000506685 1940 ntTSL 5 BASIC5.33□□□□□ -1.56
CISHQ9NSE2 CCDC62-205ENST00000537566 3537 ntAPPRIS ALT2 TSL 2 BASIC5.33□□□□□ -1.56
CISHQ9NSE2 C5-201ENST00000223642 5465 ntAPPRIS P1 TSL 1 (best) BASIC5.33□□□□□ -1.56
CISHQ9NSE2 AC007996.1-201ENST00000620414 2821 ntBASIC5.33□□□□□ -1.56
CISHQ9NSE2 FAS-205ENST00000357339 1044 ntAPPRIS ALT2 TSL 1 (best) BASIC5.33□□□□□ -1.56
CISHQ9NSE2 MIR105-2-201ENST00000385083 81 ntBASIC5.33□□□□□ -1.56
CISHQ9NSE2 AC005522.1-201ENST00000395416 346 ntBASIC5.33□□□□□ -1.56
CISHQ9NSE2 AL136116.2-201ENST00000404020 785 ntBASIC5.33□□□□□ -1.56
CISHQ9NSE2 AC068483.1-201ENST00000413403 660 ntTSL 3 BASIC5.33□□□□□ -1.56
CISHQ9NSE2 IFNA17-201ENST00000413767 980 ntAPPRIS P1 BASIC5.33□□□□□ -1.56
CISHQ9NSE2 AL591468.1-201ENST00000417932 573 ntTSL 3 BASIC5.33□□□□□ -1.56
CISHQ9NSE2 AC013429.2-201ENST00000418798 781 ntBASIC5.33□□□□□ -1.56
CISHQ9NSE2 AL158154.1-201ENST00000427387 465 ntTSL 3 BASIC5.33□□□□□ -1.56
CISHQ9NSE2 LINC01704-202ENST00000442358 649 ntTSL 3 BASIC5.33□□□□□ -1.56
CISHQ9NSE2 AL137845.2-201ENST00000444292 988 ntBASIC5.33□□□□□ -1.56
CISHQ9NSE2 MRPL35P2-201ENST00000448009 511 ntBASIC5.33□□□□□ -1.56
CISHQ9NSE2 AC073486.1-202ENST00000458437 489 ntTSL 3 BASIC5.33□□□□□ -1.56
CISHQ9NSE2 AP001970.1-201ENST00000531681 701 ntTSL 3 BASIC5.33□□□□□ -1.56
Retrieved 100 of 98,524 protein–RNA pairs in 92.8 ms