Protein–RNA interactions for Protein: Q9NPC3

CCNB1IP1, E3 ubiquitin-protein ligase CCNB1IP1, humanhuman

Predictions only

Length 277 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCNB1IP1Q9NPC3 SSX5-203ENST00000376923 1208 ntAPPRIS ALT2 TSL 5 BASIC4.87□□□□□ -1.63
CCNB1IP1Q9NPC3 OR2W1-201ENST00000377175 1028 ntAPPRIS P1 BASIC4.87□□□□□ -1.63
CCNB1IP1Q9NPC3 RNA5SP122-201ENST00000384457 108 ntBASIC4.87□□□□□ -1.63
CCNB1IP1Q9NPC3 RNU6-1320P-201ENST00000390838 107 ntBASIC4.87□□□□□ -1.63
CCNB1IP1Q9NPC3 RNU6-1269P-201ENST00000391139 107 ntBASIC4.87□□□□□ -1.63
CCNB1IP1Q9NPC3 CAPSL-201ENST00000397366 969 ntAPPRIS P1 TSL 3 BASIC4.87□□□□□ -1.63
CCNB1IP1Q9NPC3 Z98742.1-201ENST00000419801 632 ntTSL 3 BASIC4.87□□□□□ -1.63
CCNB1IP1Q9NPC3 MARK2P12-201ENST00000420129 585 ntBASIC4.87□□□□□ -1.63
CCNB1IP1Q9NPC3 AC093155.2-201ENST00000420734 937 ntBASIC4.87□□□□□ -1.63
CCNB1IP1Q9NPC3 AL133173.1-201ENST00000423458 397 ntBASIC4.87□□□□□ -1.63
CCNB1IP1Q9NPC3 AL021153.1-201ENST00000427360 308 ntTSL 3 BASIC4.87□□□□□ -1.63
CCNB1IP1Q9NPC3 NPM1P22-201ENST00000427761 952 ntBASIC4.87□□□□□ -1.63
CCNB1IP1Q9NPC3 PCNPP2-201ENST00000441651 455 ntBASIC4.87□□□□□ -1.63
CCNB1IP1Q9NPC3 PCBP1-AS1-232ENST00000442040 1111 ntTSL 3 BASIC4.87□□□□□ -1.63
CCNB1IP1Q9NPC3 AL591363.1-201ENST00000450091 483 ntBASIC4.87□□□□□ -1.63
CCNB1IP1Q9NPC3 BX842559.2-201ENST00000451418 605 ntBASIC4.87□□□□□ -1.63
CCNB1IP1Q9NPC3 DNAJB5P1-201ENST00000454004 806 ntBASIC4.87□□□□□ -1.63
CCNB1IP1Q9NPC3 RNU6-599P-201ENST00000459383 107 ntBASIC4.87□□□□□ -1.63
CCNB1IP1Q9NPC3 RNU6-1193P-201ENST00000459461 107 ntBASIC4.87□□□□□ -1.63
CCNB1IP1Q9NPC3 CREM-228ENST00000473940 1182 ntTSL 1 (best) BASIC4.87□□□□□ -1.63
CCNB1IP1Q9NPC3 TTC26-205ENST00000474035 1193 ntTSL 1 (best) BASIC4.87□□□□□ -1.63
CCNB1IP1Q9NPC3 LINC02492-201ENST00000502952 564 ntTSL 5 BASIC4.87□□□□□ -1.63
CCNB1IP1Q9NPC3 LINC02147-201ENST00000509367 807 ntTSL 2 BASIC4.87□□□□□ -1.63
CCNB1IP1Q9NPC3 AC090568.1-201ENST00000509499 856 ntBASIC4.87□□□□□ -1.63
CCNB1IP1Q9NPC3 RNA5SP303-201ENST00000516192 130 ntBASIC4.87□□□□□ -1.63
CCNB1IP1Q9NPC3 AC025524.2-206ENST00000517953 439 ntTSL 3 BASIC4.87□□□□□ -1.63
CCNB1IP1Q9NPC3 AC078906.1-201ENST00000523602 798 ntTSL 3 BASIC4.87□□□□□ -1.63
CCNB1IP1Q9NPC3 AC007527.1-202ENST00000543347 382 ntTSL 3 BASIC4.87□□□□□ -1.63
CCNB1IP1Q9NPC3 LINC02400-201ENST00000548210 351 ntTSL 2 BASIC4.87□□□□□ -1.63
CCNB1IP1Q9NPC3 AL390816.1-201ENST00000553990 322 ntTSL 3 BASIC4.87□□□□□ -1.63
CCNB1IP1Q9NPC3 SETP1-201ENST00000556014 845 ntBASIC4.87□□□□□ -1.63
CCNB1IP1Q9NPC3 AC026992.1-201ENST00000558269 571 ntTSL 2 BASIC4.87□□□□□ -1.63
CCNB1IP1Q9NPC3 USP3-AS1-202ENST00000559357 455 ntTSL 2 BASIC4.87□□□□□ -1.63
CCNB1IP1Q9NPC3 AC010547.6-201ENST00000571789 193 ntBASIC4.87□□□□□ -1.63
CCNB1IP1Q9NPC3 AC010463.2-201ENST00000597592 661 ntTSL 5 BASIC4.87□□□□□ -1.63
CCNB1IP1Q9NPC3 HCG18-243ENST00000602498 327 ntTSL 3 BASIC4.87□□□□□ -1.63
CCNB1IP1Q9NPC3 AC025574.2-201ENST00000615621 514 ntBASIC4.87□□□□□ -1.63
CCNB1IP1Q9NPC3 RNU6-368P-201ENST00000620928 107 ntBASIC4.87□□□□□ -1.63
CCNB1IP1Q9NPC3 RNU6-538P-201ENST00000622329 107 ntBASIC4.87□□□□□ -1.63
CCNB1IP1Q9NPC3 AC007683.2-201ENST00000624681 714 ntBASIC4.87□□□□□ -1.63
CCNB1IP1Q9NPC3 AC008691.1-209ENST00000642094 814 ntBASIC4.87□□□□□ -1.63
CCNB1IP1Q9NPC3 AC245407.1-201ENST00000621489 2538 ntTSL 2 BASIC4.87□□□□□ -1.63
CCNB1IP1Q9NPC3 CROT-204ENST00000442291 1993 ntTSL 5 BASIC4.87□□□□□ -1.63
CCNB1IP1Q9NPC3 GABRA3-201ENST00000370314 3712 ntAPPRIS P1 TSL 1 (best) BASIC4.87□□□□□ -1.63
CCNB1IP1Q9NPC3 MLIP-213ENST00000514921 5743 ntAPPRIS ALT2 TSL 1 (best) BASIC4.87□□□□□ -1.63
CCNB1IP1Q9NPC3 RNF20-202ENST00000389120 3940 ntAPPRIS P1 TSL 1 (best) BASIC4.87□□□□□ -1.63
CCNB1IP1Q9NPC3 DTNA-202ENST00000283365 6522 ntTSL 5 BASIC4.87□□□□□ -1.63
CCNB1IP1Q9NPC3 EPHA7-202ENST00000369303 6588 ntAPPRIS P1 TSL 1 (best) BASIC4.87□□□□□ -1.63
CCNB1IP1Q9NPC3 RC3H1-201ENST00000258349 10988 ntAPPRIS P3 TSL 1 (best) BASIC4.87□□□□□ -1.63
CCNB1IP1Q9NPC3 C6-202ENST00000337836 3551 ntAPPRIS P1 TSL 1 (best) BASIC4.86□□□□□ -1.63
CCNB1IP1Q9NPC3 AC023421.1-201ENST00000590535 1785 ntBASIC4.86□□□□□ -1.63
CCNB1IP1Q9NPC3 NUF2-202ENST00000367900 1842 ntAPPRIS P1 TSL 1 (best) BASIC4.86□□□□□ -1.63
CCNB1IP1Q9NPC3 RNF182-207ENST00000537663 3382 ntAPPRIS P1 TSL 4 BASIC4.86□□□□□ -1.63
CCNB1IP1Q9NPC3 TMSB4XP4-201ENST00000323496 618 ntBASIC4.86□□□□□ -1.63
CCNB1IP1Q9NPC3 RNU6-1331P-201ENST00000363658 106 ntBASIC4.86□□□□□ -1.63
CCNB1IP1Q9NPC3 RN7SKP292-201ENST00000365522 317 ntBASIC4.86□□□□□ -1.63
CCNB1IP1Q9NPC3 VDAC2P1-201ENST00000399358 958 ntBASIC4.86□□□□□ -1.63
CCNB1IP1Q9NPC3 AC098592.2-201ENST00000413158 265 ntBASIC4.86□□□□□ -1.63
CCNB1IP1Q9NPC3 SEPT7P8-201ENST00000413308 775 ntBASIC4.86□□□□□ -1.63
CCNB1IP1Q9NPC3 TNPO1P1-201ENST00000423641 1138 ntBASIC4.86□□□□□ -1.63
CCNB1IP1Q9NPC3 AL356056.1-206ENST00000424615 407 ntTSL 5 BASIC4.86□□□□□ -1.63
CCNB1IP1Q9NPC3 VAV3-AS1-201ENST00000438318 619 ntTSL 2 BASIC4.86□□□□□ -1.63
CCNB1IP1Q9NPC3 AC064862.4-201ENST00000442180 334 ntBASIC4.86□□□□□ -1.63
CCNB1IP1Q9NPC3 AC073109.1-201ENST00000445066 978 ntBASIC4.86□□□□□ -1.63
CCNB1IP1Q9NPC3 AL589765.3-201ENST00000446084 462 ntBASIC4.86□□□□□ -1.63
CCNB1IP1Q9NPC3 LINC01422-203ENST00000447149 509 ntTSL 4 BASIC4.86□□□□□ -1.63
CCNB1IP1Q9NPC3 VDAC2P4-201ENST00000452925 711 ntBASIC4.86□□□□□ -1.63
CCNB1IP1Q9NPC3 YWHAEP1-201ENST00000453697 763 ntBASIC4.86□□□□□ -1.63
CCNB1IP1Q9NPC3 AC107015.1-201ENST00000466902 747 ntBASIC4.86□□□□□ -1.63
CCNB1IP1Q9NPC3 AC005674.1-201ENST00000503493 459 ntTSL 3 BASIC4.86□□□□□ -1.63
CCNB1IP1Q9NPC3 AC068672.3-203ENST00000505166 311 ntTSL 3 BASIC4.86□□□□□ -1.63
CCNB1IP1Q9NPC3 AC097491.1-201ENST00000507857 672 ntTSL 5 BASIC4.86□□□□□ -1.63
CCNB1IP1Q9NPC3 RPL37-204ENST00000508493 553 ntAPPRIS ALT1 TSL 1 (best) BASIC4.86□□□□□ -1.63
CCNB1IP1Q9NPC3 AC011411.1-201ENST00000509592 876 ntBASIC4.86□□□□□ -1.63
CCNB1IP1Q9NPC3 POLR2K-203ENST00000522439 543 ntTSL 2 BASIC4.86□□□□□ -1.63
CCNB1IP1Q9NPC3 AP001804.2-201ENST00000533932 910 ntBASIC4.86□□□□□ -1.63
CCNB1IP1Q9NPC3 LINC02281-201ENST00000549013 375 ntTSL 3 BASIC4.86□□□□□ -1.63
CCNB1IP1Q9NPC3 AC093591.2-201ENST00000565254 3843 ntBASIC4.86□□□□□ -1.63
CCNB1IP1Q9NPC3 AC114947.2-202ENST00000569313 643 ntTSL 3 BASIC4.86□□□□□ -1.63
CCNB1IP1Q9NPC3 LINC01572-205ENST00000570152 360 ntTSL 3 BASIC4.86□□□□□ -1.63
CCNB1IP1Q9NPC3 AP000897.2-201ENST00000579509 1057 ntTSL 3 BASIC4.86□□□□□ -1.63
CCNB1IP1Q9NPC3 RN7SL356P-201ENST00000582228 248 ntBASIC4.86□□□□□ -1.63
CCNB1IP1Q9NPC3 MIR4505-201ENST00000582238 73 ntBASIC4.86□□□□□ -1.63
CCNB1IP1Q9NPC3 TTN-AS1-219ENST00000586707 834 ntTSL 5 BASIC4.86□□□□□ -1.63
CCNB1IP1Q9NPC3 C1orf195-202ENST00000625027 441 ntTSL 5 BASIC4.86□□□□□ -1.63
CCNB1IP1Q9NPC3 LINC01320-210ENST00000626008 929 ntTSL 5 BASIC4.86□□□□□ -1.63
CCNB1IP1Q9NPC3 AD000090.1-201ENST00000638356 494 ntTSL 1 (best) BASIC4.86□□□□□ -1.63
CCNB1IP1Q9NPC3 PRG4-203ENST00000367485 4765 ntAPPRIS ALT2 TSL 5 BASIC4.86□□□□□ -1.63
CCNB1IP1Q9NPC3 IQCH-202ENST00000358767 3062 ntTSL 5 BASIC4.86□□□□□ -1.63
CCNB1IP1Q9NPC3 ATP13A4-203ENST00000392443 4016 ntTSL 5 BASIC4.86□□□□□ -1.63
CCNB1IP1Q9NPC3 RLIMP2-201ENST00000427891 1563 ntBASIC4.86□□□□□ -1.63
CCNB1IP1Q9NPC3 POLE2-206ENST00000554396 1581 ntTSL 1 (best) BASIC4.86□□□□□ -1.63
CCNB1IP1Q9NPC3 FAM204A-203ENST00000369183 13889 ntAPPRIS P1 TSL 1 (best) BASIC4.86□□□□□ -1.63
CCNB1IP1Q9NPC3 KLHL13-201ENST00000262820 3972 ntAPPRIS P3 TSL 1 (best) BASIC4.86□□□□□ -1.63
CCNB1IP1Q9NPC3 LINC01748-204ENST00000635048 5678 ntTSL 5 BASIC4.86□□□□□ -1.63
CCNB1IP1Q9NPC3 R3HCC1L-202ENST00000314594 3198 ntAPPRIS P1 TSL 5 BASIC4.86□□□□□ -1.63
CCNB1IP1Q9NPC3 XIRP2-207ENST00000628543 12182 ntTSL 5 BASIC4.85□□□□□ -1.63
CCNB1IP1Q9NPC3 SSR1-202ENST00000397511 3248 ntTSL 5 BASIC4.85□□□□□ -1.63
CCNB1IP1Q9NPC3 ZNF534-202ENST00000332323 2086 ntAPPRIS P4 TSL 1 (best) BASIC4.85□□□□□ -1.63
CCNB1IP1Q9NPC3 DLX6-AS1-201ENST00000430027 15364 ntTSL 2 BASIC4.85□□□□□ -1.63
Retrieved 100 of 98,524 protein–RNA pairs in 98.6 ms