Protein–RNA interactions for Protein: Q9HCM3

KIAA1549, UPF0606 protein KIAA1549, humanhuman

Predictions only

Length 1,950 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KIAA1549Q9HCM3 ADGRL3-AS1-202ENST00000504135 542 ntTSL 5 BASIC4.56□□□□□ -1.68
KIAA1549Q9HCM3 SNORA26.10-201ENST00000516427 141 ntBASIC4.56□□□□□ -1.68
KIAA1549Q9HCM3 RNA5SP392-201ENST00000516905 112 ntBASIC4.56□□□□□ -1.68
KIAA1549Q9HCM3 AC073023.1-201ENST00000522896 773 ntTSL 5 BASIC4.56□□□□□ -1.68
KIAA1549Q9HCM3 AC092490.3-201ENST00000545370 572 ntBASIC4.56□□□□□ -1.68
KIAA1549Q9HCM3 AC026464.3-201ENST00000563634 564 ntAPPRIS P1 TSL 4 BASIC4.56□□□□□ -1.68
KIAA1549Q9HCM3 AC116553.2-201ENST00000564203 463 ntBASIC4.56□□□□□ -1.68
KIAA1549Q9HCM3 MIR3934-201ENST00000579806 107 ntBASIC4.56□□□□□ -1.68
KIAA1549Q9HCM3 L34079.2-201ENST00000597119 561 ntTSL 3 BASIC4.56□□□□□ -1.68
KIAA1549Q9HCM3 AC112694.2-201ENST00000623697 768 ntBASIC4.56□□□□□ -1.68
KIAA1549Q9HCM3 LINC01204-202ENST00000435394 2214 ntTSL 1 (best) BASIC4.56□□□□□ -1.68
KIAA1549Q9HCM3 PI15-202ENST00000523773 1413 ntAPPRIS P1 TSL 1 (best) BASIC4.56□□□□□ -1.68
KIAA1549Q9HCM3 SLC16A9-201ENST00000395347 3646 ntAPPRIS P1 TSL 2 BASIC4.56□□□□□ -1.68
KIAA1549Q9HCM3 TDO2-208ENST00000536354 1701 ntAPPRIS P1 TSL 1 (best) BASIC4.56□□□□□ -1.68
KIAA1549Q9HCM3 STXBP4-202ENST00000398391 2160 ntTSL 1 (best) BASIC4.56□□□□□ -1.68
KIAA1549Q9HCM3 ZNF83-204ENST00000545872 2633 ntAPPRIS P1 TSL 2 BASIC4.56□□□□□ -1.68
KIAA1549Q9HCM3 EFCAB3-201ENST00000305286 1542 ntAPPRIS P1 TSL 1 (best) BASIC4.56□□□□□ -1.68
KIAA1549Q9HCM3 USP28-213ENST00000544967 3498 ntTSL 1 (best) BASIC4.55□□□□□ -1.68
KIAA1549Q9HCM3 DNA2-201ENST00000358410 4208 ntAPPRIS P1 TSL 1 (best) BASIC4.55□□□□□ -1.68
KIAA1549Q9HCM3 SRPK2-201ENST00000357311 3700 ntAPPRIS P3 TSL 1 (best) BASIC4.55□□□□□ -1.68
KIAA1549Q9HCM3 AASDH-201ENST00000205214 3590 ntAPPRIS P1 TSL 1 (best) BASIC4.55□□□□□ -1.68
KIAA1549Q9HCM3 OTUD4-202ENST00000454497 7069 ntTSL 2 BASIC4.55□□□□□ -1.68
KIAA1549Q9HCM3 GPHN-204ENST00000543237 2459 ntTSL 2 BASIC4.55□□□□□ -1.68
KIAA1549Q9HCM3 IGLJ6-201ENST00000390328 70 ntAPPRIS P1 BASIC4.55□□□□□ -1.68
KIAA1549Q9HCM3 SPATA13-AS1-201ENST00000430733 433 ntTSL 3 BASIC4.55□□□□□ -1.68
KIAA1549Q9HCM3 STXBP5-AS1-204ENST00000431143 644 ntTSL 3 BASIC4.55□□□□□ -1.68
KIAA1549Q9HCM3 AL354863.1-202ENST00000431695 494 ntTSL 5 BASIC4.55□□□□□ -1.68
KIAA1549Q9HCM3 AL591719.2-201ENST00000437400 386 ntTSL 3 BASIC4.55□□□□□ -1.68
KIAA1549Q9HCM3 CYCSP24-201ENST00000445119 316 ntBASIC4.55□□□□□ -1.68
KIAA1549Q9HCM3 AL034380.1-201ENST00000448791 306 ntTSL 3 BASIC4.55□□□□□ -1.68
KIAA1549Q9HCM3 BACH1-IT1-201ENST00000504298 821 ntTSL 1 (best) BASIC4.55□□□□□ -1.68
KIAA1549Q9HCM3 AC090809.1-201ENST00000524132 570 ntTSL 4 BASIC4.55□□□□□ -1.68
KIAA1549Q9HCM3 NOP10-202ENST00000557912 436 ntTSL 2 BASIC4.55□□□□□ -1.68
KIAA1549Q9HCM3 AL390726.5-202ENST00000564800 256 ntBASIC4.55□□□□□ -1.68
KIAA1549Q9HCM3 AC011453.2-201ENST00000603737 729 ntBASIC4.55□□□□□ -1.68
KIAA1549Q9HCM3 AL031320.1-201ENST00000604177 357 ntBASIC4.55□□□□□ -1.68
KIAA1549Q9HCM3 EMSY-206ENST00000525038 4376 ntTSL 1 (best) BASIC4.55□□□□□ -1.68
KIAA1549Q9HCM3 NHSL2-204ENST00000631375 12593 ntTSL 5 BASIC4.55□□□□□ -1.68
KIAA1549Q9HCM3 PCDH15-215ENST00000409834 5401 ntTSL 5 BASIC4.55□□□□□ -1.68
KIAA1549Q9HCM3 AC024337.2-201ENST00000616608 2797 ntTSL 5 BASIC4.55□□□□□ -1.68
KIAA1549Q9HCM3 MYO3B-202ENST00000408978 5529 ntAPPRIS P3 TSL 1 (best) BASIC4.55□□□□□ -1.68
KIAA1549Q9HCM3 SMG1P7-201ENST00000565246 2704 ntBASIC4.55□□□□□ -1.68
KIAA1549Q9HCM3 AC131971.1-201ENST00000332881 1482 ntBASIC4.55□□□□□ -1.68
KIAA1549Q9HCM3 ERI2-202ENST00000357967 3499 ntAPPRIS P1 TSL 5 BASIC4.55□□□□□ -1.68
KIAA1549Q9HCM3 DSPP-201ENST00000282478 4281 ntAPPRIS P1 TSL 5 BASIC4.55□□□□□ -1.68
KIAA1549Q9HCM3 SLC10A7-203ENST00000432059 3747 ntTSL 1 (best) BASIC4.55□□□□□ -1.68
KIAA1549Q9HCM3 ZNF611-201ENST00000319783 3153 ntAPPRIS P1 TSL 2 BASIC4.55□□□□□ -1.68
KIAA1549Q9HCM3 SRSF11-201ENST00000370949 3034 ntTSL 1 (best) BASIC4.55□□□□□ -1.68
KIAA1549Q9HCM3 GAS2L3-203ENST00000539410 2229 ntAPPRIS P1 TSL 2 BASIC4.55□□□□□ -1.68
KIAA1549Q9HCM3 SMC2-203ENST00000374793 5909 ntAPPRIS P1 TSL 1 (best) BASIC4.55□□□□□ -1.68
KIAA1549Q9HCM3 CTAGE5-207ENST00000396165 3071 ntTSL 1 (best) BASIC4.55□□□□□ -1.68
KIAA1549Q9HCM3 RNA5SP443-201ENST00000363083 132 ntBASIC4.54□□□□□ -1.68
KIAA1549Q9HCM3 RN7SKP113-201ENST00000363891 295 ntBASIC4.54□□□□□ -1.68
KIAA1549Q9HCM3 C1orf54-202ENST00000369099 600 ntAPPRIS P1 TSL 1 (best) BASIC4.54□□□□□ -1.68
KIAA1549Q9HCM3 RNA5SP241-201ENST00000391326 114 ntBASIC4.54□□□□□ -1.68
KIAA1549Q9HCM3 AL359378.2-201ENST00000415575 746 ntTSL 2 BASIC4.54□□□□□ -1.68
KIAA1549Q9HCM3 AC046176.1-201ENST00000435260 1170 ntBASIC4.54□□□□□ -1.68
KIAA1549Q9HCM3 AL137076.1-201ENST00000441046 551 ntTSL 2 BASIC4.54□□□□□ -1.68
KIAA1549Q9HCM3 AL354794.1-201ENST00000442103 516 ntTSL 3 BASIC4.54□□□□□ -1.68
KIAA1549Q9HCM3 AC034228.3-201ENST00000446275 562 ntTSL 3 BASIC4.54□□□□□ -1.68
KIAA1549Q9HCM3 GAPDHP14-201ENST00000450472 937 ntBASIC4.54□□□□□ -1.68
KIAA1549Q9HCM3 AL356981.1-201ENST00000454879 684 ntBASIC4.54□□□□□ -1.68
KIAA1549Q9HCM3 AC093801.1-201ENST00000504017 307 ntTSL 2 BASIC4.54□□□□□ -1.68
KIAA1549Q9HCM3 GAPDHP56-201ENST00000506031 988 ntBASIC4.54□□□□□ -1.68
KIAA1549Q9HCM3 MOCS2-205ENST00000508922 1210 ntTSL 5 BASIC4.54□□□□□ -1.68
KIAA1549Q9HCM3 AC009884.1-201ENST00000522670 545 ntTSL 4 BASIC4.54□□□□□ -1.68
KIAA1549Q9HCM3 OR7E128P-201ENST00000532736 1024 ntBASIC4.54□□□□□ -1.68
KIAA1549Q9HCM3 AC008250.1-201ENST00000539874 522 ntTSL 3 BASIC4.54□□□□□ -1.68
KIAA1549Q9HCM3 AL161757.4-204ENST00000557136 834 ntTSL 3 BASIC4.54□□□□□ -1.68
KIAA1549Q9HCM3 NPM1P5-201ENST00000557228 838 ntBASIC4.54□□□□□ -1.68
KIAA1549Q9HCM3 AC011840.5-201ENST00000582125 771 ntBASIC4.54□□□□□ -1.68
KIAA1549Q9HCM3 MOCS2-209ENST00000582677 741 ntTSL 5 BASIC4.54□□□□□ -1.68
KIAA1549Q9HCM3 DARS-AS1-211ENST00000595061 720 ntTSL 5 BASIC4.54□□□□□ -1.68
KIAA1549Q9HCM3 RNA5SP439-201ENST00000617595 124 ntBASIC4.54□□□□□ -1.68
KIAA1549Q9HCM3 AC005899.7-201ENST00000618199 588 ntBASIC4.54□□□□□ -1.68
KIAA1549Q9HCM3 AC073342.3-201ENST00000624211 193 ntBASIC4.54□□□□□ -1.68
KIAA1549Q9HCM3 LINC01338-201ENST00000627179 632 ntTSL 3 BASIC4.54□□□□□ -1.68
KIAA1549Q9HCM3 AC005972.4-201ENST00000636248 1131 ntTSL 5 BASIC4.54□□□□□ -1.68
KIAA1549Q9HCM3 LINC01361-202ENST00000452834 1526 ntTSL 1 (best) BASIC4.54□□□□□ -1.68
KIAA1549Q9HCM3 SLC1A3-216ENST00000613445 4030 ntTSL 5 BASIC4.54□□□□□ -1.68
KIAA1549Q9HCM3 ARHGEF6-203ENST00000370622 4779 ntTSL 1 (best) BASIC4.54□□□□□ -1.68
KIAA1549Q9HCM3 LRRN3-204ENST00000451085 3725 ntAPPRIS P1 TSL 2 BASIC4.54□□□□□ -1.68
KIAA1549Q9HCM3 RAB30-212ENST00000533486 9929 ntAPPRIS P1 TSL 1 (best) BASIC4.54□□□□□ -1.68
KIAA1549Q9HCM3 HYDIN-201ENST00000288168 2953 ntAPPRIS ALT2 TSL 1 (best) BASIC4.54□□□□□ -1.68
KIAA1549Q9HCM3 TRPC4-203ENST00000358477 2955 ntTSL 1 (best) BASIC4.54□□□□□ -1.68
KIAA1549Q9HCM3 MUC17-201ENST00000306151 14247 ntAPPRIS P1 TSL 1 (best) BASIC4.54□□□□□ -1.68
KIAA1549Q9HCM3 SCN2A-209ENST00000636071 8881 ntAPPRIS ALT1 TSL 5 BASIC4.54□□□□□ -1.68
KIAA1549Q9HCM3 SCN2A-214ENST00000636985 8856 ntTSL 5 BASIC4.54□□□□□ -1.68
KIAA1549Q9HCM3 LIPF-203ENST00000394375 1470 ntTSL 2 BASIC4.54□□□□□ -1.68
KIAA1549Q9HCM3 HSPA8P14-201ENST00000552265 1805 ntBASIC4.54□□□□□ -1.68
KIAA1549Q9HCM3 PCAT14-202ENST00000627127 3935 ntBASIC4.54□□□□□ -1.68
KIAA1549Q9HCM3 PRTG-201ENST00000389286 11967 ntAPPRIS P1 TSL 1 (best) BASIC4.54□□□□□ -1.68
KIAA1549Q9HCM3 AL450345.1-202ENST00000605741 3881 ntBASIC4.54□□□□□ -1.68
KIAA1549Q9HCM3 RNF182-207ENST00000537663 3382 ntAPPRIS P1 TSL 4 BASIC4.54□□□□□ -1.68
KIAA1549Q9HCM3 TRBV24-1-201ENST00000390397 381 ntAPPRIS P1 BASIC4.54□□□□□ -1.68
KIAA1549Q9HCM3 GAPDHP15-201ENST00000398586 975 ntBASIC4.54□□□□□ -1.68
KIAA1549Q9HCM3 HMGB3P7-201ENST00000400214 611 ntBASIC4.54□□□□□ -1.68
KIAA1549Q9HCM3 ARSD-AS1-201ENST00000414053 816 ntTSL 2 BASIC4.54□□□□□ -1.68
KIAA1549Q9HCM3 COX5BP7-201ENST00000414780 274 ntBASIC4.54□□□□□ -1.68
KIAA1549Q9HCM3 RPL26P29-201ENST00000415623 438 ntBASIC4.54□□□□□ -1.68
Retrieved 100 of 98,524 protein–RNA pairs in 74.5 ms