Protein–RNA interactions for Protein: Q9HAW0

BRF2, Transcription factor IIIB 50 kDa subunit, humanhuman

Predictions only

Length 419 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BRF2Q9HAW0 LINC01980-201ENST00000414382 543 ntTSL 4 BASIC5.37□□□□□ -1.55
BRF2Q9HAW0 ATP5A1P8-201ENST00000423669 1291 ntBASIC5.37□□□□□ -1.55
BRF2Q9HAW0 AL390115.1-201ENST00000425271 423 ntTSL 5 BASIC5.37□□□□□ -1.55
BRF2Q9HAW0 AL109761.1-201ENST00000428689 422 ntTSL 3 BASIC5.37□□□□□ -1.55
BRF2Q9HAW0 AL450472.1-201ENST00000439434 405 ntTSL 2 BASIC5.37□□□□□ -1.55
BRF2Q9HAW0 MED28P3-201ENST00000444288 531 ntBASIC5.37□□□□□ -1.55
BRF2Q9HAW0 AL355592.1-201ENST00000450292 386 ntTSL 2 BASIC5.37□□□□□ -1.55
BRF2Q9HAW0 AP006222.1-205ENST00000450734 457 ntBASIC5.37□□□□□ -1.55
BRF2Q9HAW0 AC011476.1-201ENST00000466725 307 ntBASIC5.37□□□□□ -1.55
BRF2Q9HAW0 SETP6-201ENST00000479329 568 ntBASIC5.37□□□□□ -1.55
BRF2Q9HAW0 AC093001.1-201ENST00000489011 551 ntTSL 4 BASIC5.37□□□□□ -1.55
BRF2Q9HAW0 AC093772.1-201ENST00000513519 506 ntTSL 2 BASIC5.37□□□□□ -1.55
BRF2Q9HAW0 SNORA31.13-201ENST00000516624 135 ntBASIC5.37□□□□□ -1.55
BRF2Q9HAW0 AC027419.2-201ENST00000518439 497 ntTSL 3 BASIC5.37□□□□□ -1.55
BRF2Q9HAW0 CIR1P1-201ENST00000524055 1133 ntBASIC5.37□□□□□ -1.55
BRF2Q9HAW0 AC073172.2-201ENST00000527770 571 ntTSL 4 BASIC5.37□□□□□ -1.55
BRF2Q9HAW0 AP000873.2-204ENST00000530825 375 ntTSL 3 BASIC5.37□□□□□ -1.55
BRF2Q9HAW0 LINC02327-205ENST00000550990 472 ntTSL 3 BASIC5.37□□□□□ -1.55
BRF2Q9HAW0 IGBP1P1-201ENST00000554337 1009 ntBASIC5.37□□□□□ -1.55
BRF2Q9HAW0 TIMM9-203ENST00000555061 598 ntAPPRIS P1 TSL 1 (best) BASIC5.37□□□□□ -1.55
BRF2Q9HAW0 AC145207.6-201ENST00000579981 782 ntTSL 5 BASIC5.37□□□□□ -1.55
BRF2Q9HAW0 AC090912.2-203ENST00000581177 477 ntTSL 3 BASIC5.37□□□□□ -1.55
BRF2Q9HAW0 AC090403.1-204ENST00000582893 572 ntTSL 4 BASIC5.37□□□□□ -1.55
BRF2Q9HAW0 AP001542.3-201ENST00000587619 527 ntTSL 5 BASIC5.37□□□□□ -1.55
BRF2Q9HAW0 AC010487.1-201ENST00000594408 1172 ntBASIC5.37□□□□□ -1.55
BRF2Q9HAW0 AC239809.3-206ENST00000596091 741 ntTSL 5 BASIC5.37□□□□□ -1.55
BRF2Q9HAW0 AC097717.1-230ENST00000597051 738 ntTSL 3 BASIC5.37□□□□□ -1.55
BRF2Q9HAW0 AC067773.1-201ENST00000603284 1094 ntBASIC5.37□□□□□ -1.55
BRF2Q9HAW0 AC018645.2-201ENST00000609151 472 ntBASIC5.37□□□□□ -1.55
BRF2Q9HAW0 AL391834.1-201ENST00000609609 560 ntBASIC5.37□□□□□ -1.55
BRF2Q9HAW0 ZNF630-AS1-201ENST00000614448 397 ntTSL 3 BASIC5.37□□□□□ -1.55
BRF2Q9HAW0 AL391425.1-202ENST00000617518 774 ntTSL 5 BASIC5.37□□□□□ -1.55
BRF2Q9HAW0 AC095038.2-201ENST00000621464 1070 ntBASIC5.37□□□□□ -1.55
BRF2Q9HAW0 AL390318.1-201ENST00000624564 687 ntBASIC5.37□□□□□ -1.55
BRF2Q9HAW0 AC087565.3-203ENST00000641018 837 ntBASIC5.37□□□□□ -1.55
BRF2Q9HAW0 AC092451.3-201ENST00000625067 1343 ntBASIC5.37□□□□□ -1.55
BRF2Q9HAW0 CLCA1-202ENST00000394711 3118 ntAPPRIS P1 TSL 1 (best) BASIC5.37□□□□□ -1.55
BRF2Q9HAW0 SYNCRIP-204ENST00000616122 6764 ntTSL 1 (best) BASIC5.37□□□□□ -1.55
BRF2Q9HAW0 HDAC9-203ENST00000406072 4102 ntTSL 5 BASIC5.37□□□□□ -1.55
BRF2Q9HAW0 PSG7-206ENST00000623675 1392 ntTSL 1 (best) BASIC5.37□□□□□ -1.55
BRF2Q9HAW0 OR2J3-202ENST00000641151 3297 ntAPPRIS P1 BASIC5.37□□□□□ -1.55
BRF2Q9HAW0 CPSF2-201ENST00000298875 13035 ntAPPRIS P1 TSL 1 (best) BASIC5.37□□□□□ -1.55
BRF2Q9HAW0 SAMD9L-204ENST00000437805 5757 ntAPPRIS P1 TSL 1 (best) BASIC5.37□□□□□ -1.55
BRF2Q9HAW0 AC005162.3-201ENST00000609389 3695 ntTSL 5 BASIC5.37□□□□□ -1.55
BRF2Q9HAW0 ABCC9-204ENST00000538350 2672 ntTSL 2 BASIC5.37□□□□□ -1.55
BRF2Q9HAW0 KCNRG-202ENST00000360473 1623 ntTSL 1 (best) BASIC5.37□□□□□ -1.55
BRF2Q9HAW0 CLIP1-AS1-201ENST00000535976 1745 ntTSL 3 BASIC5.37□□□□□ -1.55
BRF2Q9HAW0 DPP8-203ENST00000341861 8699 ntAPPRIS P4 TSL 2 BASIC5.37□□□□□ -1.55
BRF2Q9HAW0 FOXN2-201ENST00000340553 5408 ntAPPRIS P1 TSL 1 (best) BASIC5.37□□□□□ -1.55
BRF2Q9HAW0 RFFL-202ENST00000394597 4227 ntAPPRIS P1 TSL 1 (best) BASIC5.37□□□□□ -1.55
BRF2Q9HAW0 FGF1-214ENST00000612258 3805 ntAPPRIS P1 TSL 1 (best) BASIC5.36□□□□□ -1.55
BRF2Q9HAW0 AC007750.1-202ENST00000418968 4098 ntTSL 5 BASIC5.36□□□□□ -1.55
BRF2Q9HAW0 ZNF559-201ENST00000317221 2732 ntTSL 2 BASIC5.36□□□□□ -1.55
BRF2Q9HAW0 ZNF271P-205ENST00000639248 4573 ntTSL 5 BASIC5.36□□□□□ -1.55
BRF2Q9HAW0 F9-201ENST00000218099 2780 ntAPPRIS P1 TSL 1 (best) BASIC5.36□□□□□ -1.55
BRF2Q9HAW0 OR6C4-203ENST00000641851 4989 ntAPPRIS P1 BASIC5.36□□□□□ -1.55
BRF2Q9HAW0 ZNF33B-208ENST00000613419 5843 ntAPPRIS ALT2 TSL 5 BASIC5.36□□□□□ -1.55
BRF2Q9HAW0 SOX2-OT-218ENST00000498731 3576 ntTSL 1 (best) BASIC5.36□□□□□ -1.55
BRF2Q9HAW0 RN7SKP145-201ENST00000363291 303 ntBASIC5.36□□□□□ -1.55
BRF2Q9HAW0 SPANXN1-201ENST00000370493 1276 ntAPPRIS P1 TSL 1 (best) BASIC5.36□□□□□ -1.55
BRF2Q9HAW0 RNU6-1176P-201ENST00000390955 107 ntBASIC5.36□□□□□ -1.55
BRF2Q9HAW0 UQCRFS1P3-201ENST00000407697 385 ntBASIC5.36□□□□□ -1.55
BRF2Q9HAW0 SCP2-205ENST00000408941 1298 ntTSL 2 BASIC5.36□□□□□ -1.55
BRF2Q9HAW0 AC069282.1-201ENST00000411911 526 ntBASIC5.36□□□□□ -1.55
BRF2Q9HAW0 AC245060.4-201ENST00000413293 1121 ntBASIC5.36□□□□□ -1.55
BRF2Q9HAW0 DCN-203ENST00000420120 753 ntTSL 1 (best) BASIC5.36□□□□□ -1.55
BRF2Q9HAW0 AC007161.1-204ENST00000423039 460 ntBASIC5.36□□□□□ -1.55
BRF2Q9HAW0 OR5M12P-201ENST00000423388 929 ntBASIC5.36□□□□□ -1.55
BRF2Q9HAW0 VN1R42P-201ENST00000424651 344 ntBASIC5.36□□□□□ -1.55
BRF2Q9HAW0 LINC01690-201ENST00000424837 576 ntTSL 2 BASIC5.36□□□□□ -1.55
BRF2Q9HAW0 AL360227.1-201ENST00000425364 433 ntTSL 3 BASIC5.36□□□□□ -1.55
BRF2Q9HAW0 AC113412.1-201ENST00000425840 504 ntBASIC5.36□□□□□ -1.55
BRF2Q9HAW0 HNRNPA1P29-201ENST00000426409 879 ntBASIC5.36□□□□□ -1.55
BRF2Q9HAW0 AC127526.2-201ENST00000426436 775 ntBASIC5.36□□□□□ -1.55
BRF2Q9HAW0 RPL7P56-201ENST00000429441 717 ntBASIC5.36□□□□□ -1.55
BRF2Q9HAW0 RPL5P2-201ENST00000429598 854 ntBASIC5.36□□□□□ -1.55
BRF2Q9HAW0 LINC02528-202ENST00000434437 535 ntTSL 2 BASIC5.36□□□□□ -1.55
BRF2Q9HAW0 AL512661.1-201ENST00000434586 1253 ntBASIC5.36□□□□□ -1.55
BRF2Q9HAW0 MTND2P40-201ENST00000436718 841 ntBASIC5.36□□□□□ -1.55
BRF2Q9HAW0 AC006335.2-201ENST00000437993 330 ntBASIC5.36□□□□□ -1.55
BRF2Q9HAW0 AL359265.1-201ENST00000440296 795 ntBASIC5.36□□□□□ -1.55
BRF2Q9HAW0 DCN-205ENST00000441303 519 ntTSL 1 (best) BASIC5.36□□□□□ -1.55
BRF2Q9HAW0 AC069540.1-201ENST00000446320 988 ntBASIC5.36□□□□□ -1.55
BRF2Q9HAW0 RPL7P55-201ENST00000450522 746 ntBASIC5.36□□□□□ -1.55
BRF2Q9HAW0 AL031668.1-201ENST00000451556 603 ntTSL 3 BASIC5.36□□□□□ -1.55
BRF2Q9HAW0 AP000547.1-201ENST00000454360 617 ntBASIC5.36□□□□□ -1.55
BRF2Q9HAW0 AZGP1P2-201ENST00000454506 345 ntBASIC5.36□□□□□ -1.55
BRF2Q9HAW0 DCN-206ENST00000456569 228 ntTSL 1 (best) BASIC5.36□□□□□ -1.55
BRF2Q9HAW0 RPS20P4-201ENST00000461659 355 ntBASIC5.36□□□□□ -1.55
BRF2Q9HAW0 RPS23P6-201ENST00000466136 431 ntBASIC5.36□□□□□ -1.55
BRF2Q9HAW0 RPL37P23-201ENST00000492641 294 ntBASIC5.36□□□□□ -1.55
BRF2Q9HAW0 INPP4B-206ENST00000506217 673 ntTSL 1 (best) BASIC5.36□□□□□ -1.55
BRF2Q9HAW0 GNPDA2-202ENST00000507534 1050 ntTSL 2 BASIC5.36□□□□□ -1.55
BRF2Q9HAW0 AC117383.1-201ENST00000507698 422 ntTSL 3 BASIC5.36□□□□□ -1.55
BRF2Q9HAW0 AC011411.1-201ENST00000509592 876 ntBASIC5.36□□□□□ -1.55
BRF2Q9HAW0 UQCRB-204ENST00000518406 595 ntTSL 5 BASIC5.36□□□□□ -1.55
BRF2Q9HAW0 AP003696.1-201ENST00000519337 770 ntTSL 3 BASIC5.36□□□□□ -1.55
BRF2Q9HAW0 AC020937.1-201ENST00000519677 1013 ntBASIC5.36□□□□□ -1.55
BRF2Q9HAW0 BUD31P1-201ENST00000521828 359 ntBASIC5.36□□□□□ -1.55
BRF2Q9HAW0 C8orf22-204ENST00000522267 739 ntAPPRIS ALT1 TSL 2 BASIC5.36□□□□□ -1.55
Retrieved 100 of 98,524 protein–RNA pairs in 144.3 ms