Protein–RNA interactions for Protein: Q96CG8

CTHRC1, Collagen triple helix repeat-containing protein 1, humanhuman

Predictions only

Length 243 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTHRC1Q96CG8 AC009120.4-201ENST00000564455 513 ntTSL 5 BASIC5.43□□□□□ -1.54
CTHRC1Q96CG8 AC074050.3-201ENST00000569175 441 ntTSL 4 BASIC5.43□□□□□ -1.54
CTHRC1Q96CG8 AC099850.2-201ENST00000577660 557 ntAPPRIS P1 TSL 3 BASIC5.43□□□□□ -1.54
CTHRC1Q96CG8 FAM106CP-201ENST00000582212 507 ntBASIC5.43□□□□□ -1.54
CTHRC1Q96CG8 AL136084.2-212ENST00000589976 654 ntTSL 5 BASIC5.43□□□□□ -1.54
CTHRC1Q96CG8 CCDC58P3-201ENST00000590792 430 ntBASIC5.43□□□□□ -1.54
CTHRC1Q96CG8 AC115522.1-201ENST00000595680 556 ntTSL 4 BASIC5.43□□□□□ -1.54
CTHRC1Q96CG8 COX6CP7-201ENST00000597056 208 ntBASIC5.43□□□□□ -1.54
CTHRC1Q96CG8 AP001267.4-201ENST00000602598 545 ntBASIC5.43□□□□□ -1.54
CTHRC1Q96CG8 AC091304.6-201ENST00000619761 202 ntBASIC5.43□□□□□ -1.54
CTHRC1Q96CG8 AP003485.2-201ENST00000623636 610 ntBASIC5.43□□□□□ -1.54
CTHRC1Q96CG8 SNAP23-222ENST00000626061 237 ntTSL 5 BASIC5.43□□□□□ -1.54
CTHRC1Q96CG8 SNAP23-223ENST00000627440 210 ntTSL 5 BASIC5.43□□□□□ -1.54
CTHRC1Q96CG8 AP001153.1-201ENST00000641024 338 ntBASIC5.43□□□□□ -1.54
CTHRC1Q96CG8 CD96-202ENST00000352690 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC5.43□□□□□ -1.54
CTHRC1Q96CG8 VNN2-206ENST00000525270 1608 ntAPPRIS ALT2 TSL 2 BASIC5.43□□□□□ -1.54
CTHRC1Q96CG8 POU1F1-202ENST00000350375 1491 ntAPPRIS P1 TSL 1 (best) BASIC5.43□□□□□ -1.54
CTHRC1Q96CG8 LINC01152-201ENST00000472655 3578 ntTSL 1 (best) BASIC5.43□□□□□ -1.54
CTHRC1Q96CG8 AMD1-204ENST00000368885 3438 ntAPPRIS P1 TSL 1 (best) BASIC5.43□□□□□ -1.54
CTHRC1Q96CG8 MFSD8-219ENST00000641228 2559 ntBASIC5.43□□□□□ -1.54
CTHRC1Q96CG8 LINC01524-201ENST00000428009 4390 ntTSL 1 (best) BASIC5.43□□□□□ -1.54
CTHRC1Q96CG8 LINC02421-201ENST00000542219 3135 ntTSL 1 (best) BASIC5.43□□□□□ -1.54
CTHRC1Q96CG8 LINC00824-203ENST00000520206 2055 ntTSL 1 (best) BASIC5.43□□□□□ -1.54
CTHRC1Q96CG8 PTPRR-204ENST00000440835 2818 ntAPPRIS ALT2 TSL 1 (best) BASIC5.42□□□□□ -1.54
CTHRC1Q96CG8 PKIB-207ENST00000392491 1379 ntAPPRIS P1 TSL 1 (best) BASIC5.42□□□□□ -1.54
CTHRC1Q96CG8 MED12L-206ENST00000474524 10744 ntAPPRIS P2 TSL 1 (best) BASIC5.42□□□□□ -1.54
CTHRC1Q96CG8 AC012321.1-201ENST00000561622 1588 ntBASIC5.42□□□□□ -1.54
CTHRC1Q96CG8 TBC1D32-204ENST00000398212 3824 ntAPPRIS P2 TSL 5 BASIC5.42□□□□□ -1.54
CTHRC1Q96CG8 PDE10A-203ENST00000539869 4401 ntAPPRIS ALT2 TSL 1 (best) BASIC5.42□□□□□ -1.54
CTHRC1Q96CG8 ADAMTS9-AS2-201ENST00000460833 3691 ntTSL 1 (best) BASIC5.42□□□□□ -1.54
CTHRC1Q96CG8 NDRG3-202ENST00000359675 2917 ntAPPRIS ALT1 TSL 1 (best) BASIC5.42□□□□□ -1.54
CTHRC1Q96CG8 MTCO1P18-201ENST00000455518 1419 ntBASIC5.42□□□□□ -1.54
CTHRC1Q96CG8 AC068775.1-202ENST00000538173 1602 ntAPPRIS P1 BASIC5.42□□□□□ -1.54
CTHRC1Q96CG8 RPL23AP82-206ENST00000480246 2987 ntTSL 1 (best) BASIC5.42□□□□□ -1.54
CTHRC1Q96CG8 POU1F1-201ENST00000344265 1149 ntTSL 5 BASIC5.42□□□□□ -1.54
CTHRC1Q96CG8 RNU4-68P-201ENST00000364314 141 ntBASIC5.42□□□□□ -1.54
CTHRC1Q96CG8 AL672167.2-201ENST00000377164 879 ntBASIC5.42□□□□□ -1.54
CTHRC1Q96CG8 S100G-201ENST00000380200 455 ntAPPRIS P1 TSL 1 (best) BASIC5.42□□□□□ -1.54
CTHRC1Q96CG8 MIR142-201ENST00000384835 87 ntBASIC5.42□□□□□ -1.54
CTHRC1Q96CG8 MIR513B-201ENST00000385136 84 ntBASIC5.42□□□□□ -1.54
CTHRC1Q96CG8 FAIM-204ENST00000393035 946 ntAPPRIS P3 TSL 1 (best) BASIC5.42□□□□□ -1.54
CTHRC1Q96CG8 AC119751.3-201ENST00000399720 670 ntBASIC5.42□□□□□ -1.54
CTHRC1Q96CG8 MYL12B-202ENST00000400175 1025 ntAPPRIS P1 TSL 3 BASIC5.42□□□□□ -1.54
CTHRC1Q96CG8 OR7E101P-201ENST00000400428 513 ntBASIC5.42□□□□□ -1.54
CTHRC1Q96CG8 MTND4P13-201ENST00000402078 1023 ntBASIC5.42□□□□□ -1.54
CTHRC1Q96CG8 FIGN-202ENST00000409634 746 ntTSL 5 BASIC5.42□□□□□ -1.54
CTHRC1Q96CG8 LYST-AS1-201ENST00000412098 521 ntTSL 3 BASIC5.42□□□□□ -1.54
CTHRC1Q96CG8 SLC20A1P1-201ENST00000413906 956 ntBASIC5.42□□□□□ -1.54
CTHRC1Q96CG8 MRPL53P1-201ENST00000414323 319 ntBASIC5.42□□□□□ -1.54
CTHRC1Q96CG8 AL645465.1-201ENST00000417765 642 ntTSL 3 BASIC5.42□□□□□ -1.54
CTHRC1Q96CG8 AC021035.1-201ENST00000421597 427 ntTSL 3 BASIC5.42□□□□□ -1.54
CTHRC1Q96CG8 AL133419.1-201ENST00000423153 640 ntTSL 3 BASIC5.42□□□□□ -1.54
CTHRC1Q96CG8 AL391832.1-201ENST00000423963 423 ntTSL 5 BASIC5.42□□□□□ -1.54
CTHRC1Q96CG8 DPYD-IT1-201ENST00000424982 401 ntTSL 3 BASIC5.42□□□□□ -1.54
CTHRC1Q96CG8 RPL7P34-201ENST00000433316 712 ntBASIC5.42□□□□□ -1.54
CTHRC1Q96CG8 HNRNPA1P18-201ENST00000433537 927 ntBASIC5.42□□□□□ -1.54
CTHRC1Q96CG8 GTF2IP3-201ENST00000433887 494 ntBASIC5.42□□□□□ -1.54
CTHRC1Q96CG8 GAPDHP48-201ENST00000436626 961 ntBASIC5.42□□□□□ -1.54
CTHRC1Q96CG8 PCBP2P1-201ENST00000437262 977 ntBASIC5.42□□□□□ -1.54
CTHRC1Q96CG8 AL162385.2-201ENST00000437864 285 ntTSL 3 BASIC5.42□□□□□ -1.54
CTHRC1Q96CG8 AL139275.1-201ENST00000447315 824 ntTSL 1 (best) BASIC5.42□□□□□ -1.54
CTHRC1Q96CG8 SORCS3-AS1-201ENST00000449805 1278 ntTSL 1 (best) BASIC5.42□□□□□ -1.54
CTHRC1Q96CG8 NAALADL2-AS3-202ENST00000453180 413 ntTSL 3 BASIC5.42□□□□□ -1.54
CTHRC1Q96CG8 PTGES3P5-201ENST00000455109 434 ntBASIC5.42□□□□□ -1.54
CTHRC1Q96CG8 GTF2IP12-201ENST00000456547 356 ntBASIC5.42□□□□□ -1.54
CTHRC1Q96CG8 RPS20P4-201ENST00000461659 355 ntBASIC5.42□□□□□ -1.54
CTHRC1Q96CG8 AC004263.1-201ENST00000479327 332 ntBASIC5.42□□□□□ -1.54
CTHRC1Q96CG8 AC082651.2-201ENST00000496833 166 ntBASIC5.42□□□□□ -1.54
CTHRC1Q96CG8 AC105924.1-201ENST00000504057 339 ntTSL 3 BASIC5.42□□□□□ -1.54
CTHRC1Q96CG8 AC105313.1-201ENST00000509121 353 ntBASIC5.42□□□□□ -1.54
CTHRC1Q96CG8 BTG4P1-201ENST00000510421 183 ntBASIC5.42□□□□□ -1.54
CTHRC1Q96CG8 RN7SKP34-201ENST00000516142 244 ntBASIC5.42□□□□□ -1.54
CTHRC1Q96CG8 AC105177.1-201ENST00000523110 555 ntTSL 4 BASIC5.42□□□□□ -1.54
CTHRC1Q96CG8 AC025437.3-201ENST00000523178 771 ntTSL 5 BASIC5.42□□□□□ -1.54
CTHRC1Q96CG8 AC103855.3-201ENST00000528445 606 ntTSL 5 BASIC5.42□□□□□ -1.54
CTHRC1Q96CG8 NDUFS5P6-201ENST00000529136 295 ntBASIC5.42□□□□□ -1.54
CTHRC1Q96CG8 RSF1-IT2-201ENST00000529656 566 ntTSL 5 BASIC5.42□□□□□ -1.54
CTHRC1Q96CG8 MITF-217ENST00000531774 1074 ntTSL 1 (best) BASIC5.42□□□□□ -1.54
CTHRC1Q96CG8 AC068305.2-201ENST00000550567 1205 ntBASIC5.42□□□□□ -1.54
CTHRC1Q96CG8 AC007424.1-205ENST00000552615 579 ntTSL 4 BASIC5.42□□□□□ -1.54
CTHRC1Q96CG8 AC078814.2-201ENST00000552996 535 ntTSL 4 BASIC5.42□□□□□ -1.54
CTHRC1Q96CG8 AC079411.1-201ENST00000565441 795 ntTSL 1 (best) BASIC5.42□□□□□ -1.54
CTHRC1Q96CG8 LYRM1-211ENST00000569023 769 ntAPPRIS P1 TSL 3 BASIC5.42□□□□□ -1.54
CTHRC1Q96CG8 PDE6G-203ENST00000571224 526 ntAPPRIS P1 TSL 5 BASIC5.42□□□□□ -1.54
CTHRC1Q96CG8 RN7SL622P-201ENST00000585292 275 ntBASIC5.42□□□□□ -1.54
CTHRC1Q96CG8 ZNF208-204ENST00000599916 740 ntTSL 1 (best) BASIC5.42□□□□□ -1.54
CTHRC1Q96CG8 LINC01320-205ENST00000604250 857 ntTSL 5 BASIC5.42□□□□□ -1.54
CTHRC1Q96CG8 NANOGP3-201ENST00000605855 286 ntBASIC5.42□□□□□ -1.54
CTHRC1Q96CG8 AC012557.1-201ENST00000607115 611 ntBASIC5.42□□□□□ -1.54
CTHRC1Q96CG8 AL133481.2-203ENST00000607558 139 ntBASIC5.42□□□□□ -1.54
CTHRC1Q96CG8 POU2F2-219ENST00000625670 371 ntTSL 5 BASIC5.42□□□□□ -1.54
CTHRC1Q96CG8 SATB1-AS1-266ENST00000630271 813 ntTSL 5 BASIC5.42□□□□□ -1.54
CTHRC1Q96CG8 AC139713.2-210ENST00000641741 992 ntBASIC5.42□□□□□ -1.54
CTHRC1Q96CG8 MTND5P23-201ENST00000430812 1655 ntBASIC5.42□□□□□ -1.54
CTHRC1Q96CG8 SENP8-202ENST00000542035 1672 ntAPPRIS P1 TSL 2 BASIC5.42□□□□□ -1.54
CTHRC1Q96CG8 GVINP1-201ENST00000526769 8438 ntTSL 1 (best) BASIC5.42□□□□□ -1.54
CTHRC1Q96CG8 ZNF638-201ENST00000264447 6505 ntAPPRIS P1 TSL 1 (best) BASIC5.42□□□□□ -1.54
CTHRC1Q96CG8 LINC00309-201ENST00000431020 3307 ntTSL 1 (best) BASIC5.42□□□□□ -1.54
CTHRC1Q96CG8 CEP85L-201ENST00000360290 1736 ntTSL 1 (best) BASIC5.42□□□□□ -1.54
CTHRC1Q96CG8 CIR1P2-201ENST00000514821 1342 ntBASIC5.42□□□□□ -1.54
Retrieved 100 of 98,524 protein–RNA pairs in 140.5 ms