Protein–RNA interactions for Protein: Q96CF2

CHMP4C, Charged multivesicular body protein 4c, humanhuman

Predictions only

Length 233 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP4CQ96CF2 NXT1P1-201ENST00000458481 316 ntBASIC6.79□□□□□ -1.32
CHMP4CQ96CF2 AC023141.9-201ENST00000458734 412 ntBASIC6.79□□□□□ -1.32
CHMP4CQ96CF2 AC110749.1-201ENST00000462007 357 ntBASIC6.79□□□□□ -1.32
CHMP4CQ96CF2 PSAT1P4-201ENST00000466500 526 ntBASIC6.79□□□□□ -1.32
CHMP4CQ96CF2 RNA5SP362-201ENST00000516048 118 ntBASIC6.79□□□□□ -1.32
CHMP4CQ96CF2 CYCSP22-201ENST00000517555 339 ntBASIC6.79□□□□□ -1.32
CHMP4CQ96CF2 LINC00535-202ENST00000517785 264 ntTSL 3 BASIC6.79□□□□□ -1.32
CHMP4CQ96CF2 AC110288.1-201ENST00000517950 446 ntTSL 3 BASIC6.79□□□□□ -1.32
CHMP4CQ96CF2 AP003355.1-201ENST00000518956 587 ntBASIC6.79□□□□□ -1.32
CHMP4CQ96CF2 HMGN2P36-201ENST00000529541 409 ntBASIC6.79□□□□□ -1.32
CHMP4CQ96CF2 AP000648.1-201ENST00000529682 397 ntBASIC6.79□□□□□ -1.32
CHMP4CQ96CF2 AC134511.1-201ENST00000535721 192 ntTSL 3 BASIC6.79□□□□□ -1.32
CHMP4CQ96CF2 LINC02327-205ENST00000550990 472 ntTSL 3 BASIC6.79□□□□□ -1.32
CHMP4CQ96CF2 GLRXP2-201ENST00000555594 321 ntBASIC6.79□□□□□ -1.32
CHMP4CQ96CF2 AC090618.1-201ENST00000571972 585 ntTSL 2 BASIC6.79□□□□□ -1.32
CHMP4CQ96CF2 AC134669.2-201ENST00000578584 1008 ntAPPRIS P1 TSL 2 BASIC6.79□□□□□ -1.32
CHMP4CQ96CF2 AL157938.2-205ENST00000586290 891 ntTSL 5 BASIC6.79□□□□□ -1.32
CHMP4CQ96CF2 AC068020.1-201ENST00000594215 661 ntBASIC6.79□□□□□ -1.32
CHMP4CQ96CF2 AC130352.1-201ENST00000602979 661 ntBASIC6.79□□□□□ -1.32
CHMP4CQ96CF2 AC005034.4-201ENST00000603612 899 ntBASIC6.79□□□□□ -1.32
CHMP4CQ96CF2 AL031601.1-201ENST00000605702 394 ntBASIC6.79□□□□□ -1.32
CHMP4CQ96CF2 MKKS-203ENST00000609375 882 ntTSL 2 BASIC6.79□□□□□ -1.32
CHMP4CQ96CF2 CU638689.1-201ENST00000623225 897 ntTSL 3 BASIC6.79□□□□□ -1.32
CHMP4CQ96CF2 AC079298.3-203ENST00000623269 555 ntTSL 3 BASIC6.79□□□□□ -1.32
CHMP4CQ96CF2 CU634019.4-201ENST00000623347 897 ntTSL 3 BASIC6.79□□□□□ -1.32
CHMP4CQ96CF2 AL445984.1-201ENST00000637834 659 ntBASIC6.79□□□□□ -1.32
CHMP4CQ96CF2 MIR4302-201ENST00000638058 60 ntBASIC6.79□□□□□ -1.32
CHMP4CQ96CF2 MFSD8-239ENST00000641590 2479 ntBASIC6.79□□□□□ -1.32
CHMP4CQ96CF2 SEC31A-226ENST00000508479 3397 ntTSL 2 BASIC6.79□□□□□ -1.32
CHMP4CQ96CF2 PSG1-201ENST00000244296 2276 ntAPPRIS P3 TSL 1 (best) BASIC6.79□□□□□ -1.32
CHMP4CQ96CF2 GABRG2-203ENST00000414552 3927 ntTSL 1 (best) BASIC6.79□□□□□ -1.32
CHMP4CQ96CF2 MAPRE2-202ENST00000413393 4173 ntAPPRIS ALT1 TSL 5 BASIC6.79□□□□□ -1.32
CHMP4CQ96CF2 ZNF780A-204ENST00000455521 3600 ntAPPRIS ALT2 TSL 5 BASIC6.78□□□□□ -1.32
CHMP4CQ96CF2 AC010127.1-209ENST00000447809 2305 ntTSL 1 (best) BASIC6.78□□□□□ -1.32
CHMP4CQ96CF2 AC103740.1-201ENST00000558888 7427 ntTSL 2 BASIC6.78□□□□□ -1.32
CHMP4CQ96CF2 LIPI-204ENST00000614229 1439 ntTSL 1 (best) BASIC6.78□□□□□ -1.32
CHMP4CQ96CF2 LRRC36-202ENST00000435835 1765 ntTSL 2 BASIC6.78□□□□□ -1.32
CHMP4CQ96CF2 FOXN2-201ENST00000340553 5408 ntAPPRIS P1 TSL 1 (best) BASIC6.78□□□□□ -1.32
CHMP4CQ96CF2 PTPRC-209ENST00000442510 5164 ntAPPRIS P4 TSL 1 (best) BASIC6.78□□□□□ -1.32
CHMP4CQ96CF2 CCDC169-202ENST00000239860 716 ntTSL 1 (best) BASIC6.78□□□□□ -1.32
CHMP4CQ96CF2 MIR323A-201ENST00000362199 86 ntBASIC6.78□□□□□ -1.32
CHMP4CQ96CF2 RNA5SP453-201ENST00000362503 119 ntBASIC6.78□□□□□ -1.32
CHMP4CQ96CF2 G6PC2-202ENST00000375363 1214 ntAPPRIS P1 TSL 1 (best) BASIC6.78□□□□□ -1.32
CHMP4CQ96CF2 RNU6-1000P-201ENST00000391066 106 ntBASIC6.78□□□□□ -1.32
CHMP4CQ96CF2 AL158050.1-201ENST00000416077 457 ntBASIC6.78□□□□□ -1.32
CHMP4CQ96CF2 LINC01752-201ENST00000417299 438 ntTSL 2 BASIC6.78□□□□□ -1.32
CHMP4CQ96CF2 AL160175.1-201ENST00000428124 247 ntBASIC6.78□□□□□ -1.32
CHMP4CQ96CF2 CA1-201ENST00000431316 1232 ntAPPRIS P1 TSL 5 BASIC6.78□□□□□ -1.32
CHMP4CQ96CF2 AL645638.1-201ENST00000440519 361 ntBASIC6.78□□□□□ -1.32
CHMP4CQ96CF2 CASP12-207ENST00000447913 819 ntTSL 1 (best) BASIC6.78□□□□□ -1.32
CHMP4CQ96CF2 CASP12-208ENST00000448103 1071 ntTSL 1 (best) BASIC6.78□□□□□ -1.32
CHMP4CQ96CF2 AC004129.2-201ENST00000457229 287 ntBASIC6.78□□□□□ -1.32
CHMP4CQ96CF2 AC018635.1-201ENST00000468292 1030 ntBASIC6.78□□□□□ -1.32
CHMP4CQ96CF2 SETP6-201ENST00000479329 568 ntBASIC6.78□□□□□ -1.32
CHMP4CQ96CF2 AC080013.1-206ENST00000496842 712 ntTSL 2 BASIC6.78□□□□□ -1.32
CHMP4CQ96CF2 PPM1AP1-201ENST00000502740 1135 ntBASIC6.78□□□□□ -1.32
CHMP4CQ96CF2 AC121161.1-201ENST00000510606 652 ntBASIC6.78□□□□□ -1.32
CHMP4CQ96CF2 GAPDHP62-201ENST00000515313 990 ntBASIC6.78□□□□□ -1.32
CHMP4CQ96CF2 RNU5A-7P-201ENST00000515979 116 ntBASIC6.78□□□□□ -1.32
CHMP4CQ96CF2 CDKN3-206ENST00000541304 1070 ntTSL 2 BASIC6.78□□□□□ -1.32
CHMP4CQ96CF2 AC087897.2-201ENST00000552639 678 ntTSL 1 (best) BASIC6.78□□□□□ -1.32
CHMP4CQ96CF2 AC023158.1-201ENST00000561632 1025 ntBASIC6.78□□□□□ -1.32
CHMP4CQ96CF2 AC090617.5-201ENST00000571815 528 ntTSL 3 BASIC6.78□□□□□ -1.32
CHMP4CQ96CF2 DHFRP1-201ENST00000579682 559 ntBASIC6.78□□□□□ -1.32
CHMP4CQ96CF2 AP005433.1-202ENST00000580845 521 ntTSL 4 BASIC6.78□□□□□ -1.32
CHMP4CQ96CF2 AC018371.1-201ENST00000584560 640 ntTSL 3 BASIC6.78□□□□□ -1.32
CHMP4CQ96CF2 AC002398.1-201ENST00000589397 427 ntTSL 5 BASIC6.78□□□□□ -1.32
CHMP4CQ96CF2 AC008759.3-201ENST00000613300 508 ntBASIC6.78□□□□□ -1.32
CHMP4CQ96CF2 MIR6886-201ENST00000619864 61 ntBASIC6.78□□□□□ -1.32
CHMP4CQ96CF2 AL356118.1-201ENST00000635272 1078 ntBASIC6.78□□□□□ -1.32
CHMP4CQ96CF2 AC134980.1-203ENST00000640541 570 ntTSL 4 BASIC6.78□□□□□ -1.32
CHMP4CQ96CF2 ST8SIA4-201ENST00000231461 6303 ntAPPRIS P1 TSL 1 (best) BASIC6.78□□□□□ -1.32
CHMP4CQ96CF2 DSPP-201ENST00000282478 4281 ntAPPRIS P1 TSL 5 BASIC6.78□□□□□ -1.32
CHMP4CQ96CF2 TMEM161BP1-201ENST00000457388 1457 ntBASIC6.78□□□□□ -1.32
CHMP4CQ96CF2 OSBPL9P1-201ENST00000604744 1469 ntBASIC6.78□□□□□ -1.32
CHMP4CQ96CF2 ALCAM-205ENST00000472644 4189 ntTSL 1 (best) BASIC6.78□□□□□ -1.32
CHMP4CQ96CF2 PRG4-204ENST00000445192 5044 ntAPPRIS P3 TSL 5 BASIC6.77□□□□□ -1.32
CHMP4CQ96CF2 CSMD3-204ENST00000455883 12485 ntTSL 1 (best) BASIC6.77□□□□□ -1.33
CHMP4CQ96CF2 ARPP19-208ENST00000566423 5362 ntAPPRIS P1 TSL 1 (best) BASIC6.77□□□□□ -1.33
CHMP4CQ96CF2 HYDIN-201ENST00000288168 2953 ntAPPRIS ALT2 TSL 1 (best) BASIC6.77□□□□□ -1.33
CHMP4CQ96CF2 ZNF701-202ENST00000391785 2634 ntAPPRIS P3 TSL 1 (best) BASIC6.77□□□□□ -1.33
CHMP4CQ96CF2 CEP85L-201ENST00000360290 1736 ntTSL 1 (best) BASIC6.77□□□□□ -1.33
CHMP4CQ96CF2 ELOC-201ENST00000284811 683 ntAPPRIS P1 TSL 3 BASIC6.77□□□□□ -1.33
CHMP4CQ96CF2 GABRG3-201ENST00000333743 1235 ntTSL 5 BASIC6.77□□□□□ -1.33
CHMP4CQ96CF2 FAS-203ENST00000355279 983 ntTSL 1 (best) BASIC6.77□□□□□ -1.33
CHMP4CQ96CF2 RNU6-1263P-201ENST00000384601 106 ntBASIC6.77□□□□□ -1.33
CHMP4CQ96CF2 OR6E1P-201ENST00000414424 923 ntBASIC6.77□□□□□ -1.33
CHMP4CQ96CF2 AL606970.4-201ENST00000424343 455 ntTSL 2 BASIC6.77□□□□□ -1.33
CHMP4CQ96CF2 AL353693.1-201ENST00000429567 442 ntTSL 3 BASIC6.77□□□□□ -1.33
CHMP4CQ96CF2 LINC01967-202ENST00000437506 515 ntTSL 5 BASIC6.77□□□□□ -1.33
CHMP4CQ96CF2 PA2G4P6-201ENST00000438325 1197 ntBASIC6.77□□□□□ -1.33
CHMP4CQ96CF2 RN7SL72P-201ENST00000460697 269 ntBASIC6.77□□□□□ -1.33
CHMP4CQ96CF2 RN7SL570P-201ENST00000484405 292 ntBASIC6.77□□□□□ -1.33
CHMP4CQ96CF2 AC008592.4-201ENST00000509999 450 ntTSL 3 BASIC6.77□□□□□ -1.33
CHMP4CQ96CF2 RPL7L1P4-201ENST00000513004 707 ntBASIC6.77□□□□□ -1.33
CHMP4CQ96CF2 AC011389.1-203ENST00000513790 573 ntTSL 4 BASIC6.77□□□□□ -1.33
CHMP4CQ96CF2 NSMCE2-202ENST00000517315 996 ntTSL 3 BASIC6.77□□□□□ -1.33
CHMP4CQ96CF2 MTCYBP19-201ENST00000517463 1124 ntBASIC6.77□□□□□ -1.33
CHMP4CQ96CF2 AC027026.1-201ENST00000532323 742 ntBASIC6.77□□□□□ -1.33
CHMP4CQ96CF2 AC016839.1-201ENST00000578162 867 ntBASIC6.77□□□□□ -1.33
Retrieved 100 of 98,524 protein–RNA pairs in 118.4 ms