Protein–RNA interactions for Protein: Q8WYN0

ATG4A, Cysteine protease ATG4A, humanhuman

Predictions only

Length 398 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4AQ8WYN0 MRE11-203ENST00000393241 2604 ntAPPRIS ALT1 TSL 5 BASIC5.79□□□□□ -1.48
ATG4AQ8WYN0 AC132825.1-201ENST00000463573 2247 ntBASIC5.79□□□□□ -1.48
ATG4AQ8WYN0 MCM10-202ENST00000378714 4547 ntAPPRIS ALT2 TSL 1 (best) BASIC5.79□□□□□ -1.48
ATG4AQ8WYN0 DROSHA-212ENST00000511367 5305 ntAPPRIS P4 TSL 1 (best) BASIC5.79□□□□□ -1.48
ATG4AQ8WYN0 ELMO1-203ENST00000396045 2524 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
ATG4AQ8WYN0 MTND5P11-201ENST00000511037 1812 ntBASIC5.79□□□□□ -1.48
ATG4AQ8WYN0 DDX58-201ENST00000379868 4089 ntTSL 5 BASIC5.79□□□□□ -1.48
ATG4AQ8WYN0 RWDD2A-201ENST00000369724 3744 ntAPPRIS P1 TSL 1 (best) BASIC5.79□□□□□ -1.48
ATG4AQ8WYN0 AC025428.2-201ENST00000435367 2672 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
ATG4AQ8WYN0 PSMA8-205ENST00000612461 1619 ntTSL 5 BASIC5.79□□□□□ -1.48
ATG4AQ8WYN0 AL121839.2-201ENST00000565058 6943 ntBASIC5.79□□□□□ -1.48
ATG4AQ8WYN0 AL034546.1-201ENST00000623740 3693 ntBASIC5.79□□□□□ -1.48
ATG4AQ8WYN0 RLN1-201ENST00000223862 967 ntAPPRIS P1 TSL 1 (best) BASIC5.79□□□□□ -1.48
ATG4AQ8WYN0 CRYGS-201ENST00000307944 759 ntAPPRIS P1 TSL 1 (best) BASIC5.79□□□□□ -1.48
ATG4AQ8WYN0 ODF3-202ENST00000342593 386 ntTSL 5 BASIC5.79□□□□□ -1.48
ATG4AQ8WYN0 CCL20-201ENST00000358813 800 ntAPPRIS P3 TSL 1 (best) BASIC5.79□□□□□ -1.48
ATG4AQ8WYN0 LINC01317-201ENST00000366209 779 ntTSL 5 BASIC5.79□□□□□ -1.48
ATG4AQ8WYN0 IGLV3-10-201ENST00000390315 382 ntAPPRIS P1 BASIC5.79□□□□□ -1.48
ATG4AQ8WYN0 LINC00161-201ENST00000412526 870 ntTSL 2 BASIC5.79□□□□□ -1.48
ATG4AQ8WYN0 AC097467.3-223ENST00000417474 449 ntTSL 3 BASIC5.79□□□□□ -1.48
ATG4AQ8WYN0 AC104653.1-201ENST00000420579 578 ntTSL 2 BASIC5.79□□□□□ -1.48
ATG4AQ8WYN0 BX470102.1-201ENST00000420695 531 ntTSL 2 BASIC5.79□□□□□ -1.48
ATG4AQ8WYN0 NANOGP5-201ENST00000424456 877 ntBASIC5.79□□□□□ -1.48
ATG4AQ8WYN0 AC018832.1-201ENST00000428171 566 ntTSL 4 BASIC5.79□□□□□ -1.48
ATG4AQ8WYN0 AL450472.1-201ENST00000439434 405 ntTSL 2 BASIC5.79□□□□□ -1.48
ATG4AQ8WYN0 AL392089.1-202ENST00000444793 449 ntTSL 2 BASIC5.79□□□□□ -1.48
ATG4AQ8WYN0 AL021937.3-201ENST00000446543 361 ntTSL 2 BASIC5.79□□□□□ -1.48
ATG4AQ8WYN0 AC093166.3-201ENST00000448785 303 ntBASIC5.79□□□□□ -1.48
ATG4AQ8WYN0 LRRC37A14P-201ENST00000452297 462 ntBASIC5.79□□□□□ -1.48
ATG4AQ8WYN0 AC083899.1-201ENST00000454465 3819 ntBASIC5.79□□□□□ -1.48
ATG4AQ8WYN0 AC092691.2-201ENST00000461787 803 ntBASIC5.79□□□□□ -1.48
ATG4AQ8WYN0 ARPP21-231ENST00000474696 572 ntTSL 2 BASIC5.79□□□□□ -1.48
ATG4AQ8WYN0 RPS17P15-201ENST00000475609 349 ntBASIC5.79□□□□□ -1.48
ATG4AQ8WYN0 SYT14P1-201ENST00000481459 721 ntBASIC5.79□□□□□ -1.48
ATG4AQ8WYN0 RPL21P47-201ENST00000483696 477 ntBASIC5.79□□□□□ -1.48
ATG4AQ8WYN0 AC018816.1-205ENST00000489771 509 ntTSL 2 BASIC5.79□□□□□ -1.48
ATG4AQ8WYN0 AC093801.1-201ENST00000504017 307 ntTSL 2 BASIC5.79□□□□□ -1.48
ATG4AQ8WYN0 AC105420.1-201ENST00000504389 582 ntBASIC5.79□□□□□ -1.48
ATG4AQ8WYN0 LINC02231-201ENST00000510459 447 ntTSL 3 BASIC5.79□□□□□ -1.48
ATG4AQ8WYN0 RN7SKP183-201ENST00000517169 324 ntBASIC5.79□□□□□ -1.48
ATG4AQ8WYN0 AC091163.3-201ENST00000518269 1144 ntBASIC5.79□□□□□ -1.48
ATG4AQ8WYN0 LINC02267-202ENST00000522173 799 ntTSL 3 BASIC5.79□□□□□ -1.48
ATG4AQ8WYN0 AC027369.2-201ENST00000528030 440 ntBASIC5.79□□□□□ -1.48
ATG4AQ8WYN0 PMS2P3-207ENST00000529061 717 ntBASIC5.79□□□□□ -1.48
ATG4AQ8WYN0 AP000916.1-201ENST00000533869 835 ntBASIC5.79□□□□□ -1.48
ATG4AQ8WYN0 AC006512.2-201ENST00000543250 486 ntBASIC5.79□□□□□ -1.48
ATG4AQ8WYN0 MYL6-213ENST00000549017 502 ntTSL 3 BASIC5.79□□□□□ -1.48
ATG4AQ8WYN0 AC008149.1-201ENST00000551844 525 ntTSL 4 BASIC5.79□□□□□ -1.48
ATG4AQ8WYN0 C15orf41-203ENST00000562489 715 ntTSL 2 BASIC5.79□□□□□ -1.48
ATG4AQ8WYN0 AC002310.3-201ENST00000569728 723 ntBASIC5.79□□□□□ -1.48
ATG4AQ8WYN0 AC099850.2-201ENST00000577660 557 ntAPPRIS P1 TSL 3 BASIC5.79□□□□□ -1.48
ATG4AQ8WYN0 AL157938.2-205ENST00000586290 891 ntTSL 5 BASIC5.79□□□□□ -1.48
ATG4AQ8WYN0 AC063977.5-201ENST00000601044 974 ntBASIC5.79□□□□□ -1.48
ATG4AQ8WYN0 SNX6P1-201ENST00000601728 1224 ntBASIC5.79□□□□□ -1.48
ATG4AQ8WYN0 BMS1P7-201ENST00000602440 1052 ntBASIC5.79□□□□□ -1.48
ATG4AQ8WYN0 AC009237.13-201ENST00000603193 276 ntBASIC5.79□□□□□ -1.48
ATG4AQ8WYN0 AC084373.1-201ENST00000603311 235 ntBASIC5.79□□□□□ -1.48
ATG4AQ8WYN0 RNU4-5P-201ENST00000607255 135 ntBASIC5.79□□□□□ -1.48
ATG4AQ8WYN0 AL589740.1-205ENST00000635561 565 ntTSL 5 BASIC5.79□□□□□ -1.48
ATG4AQ8WYN0 AC008691.1-209ENST00000642094 814 ntBASIC5.79□□□□□ -1.48
ATG4AQ8WYN0 UGT2B17-201ENST00000317746 2077 ntAPPRIS P1 TSL 1 (best) BASIC5.79□□□□□ -1.48
ATG4AQ8WYN0 AC067956.1-201ENST00000414512 2062 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
ATG4AQ8WYN0 AL121594.3-201ENST00000557565 3857 ntAPPRIS P1 TSL 2 BASIC5.79□□□□□ -1.48
ATG4AQ8WYN0 CSDE1-202ENST00000339438 4006 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
ATG4AQ8WYN0 N4BP2L2-204ENST00000399396 2872 ntTSL 5 BASIC5.79□□□□□ -1.48
ATG4AQ8WYN0 CYP3A7-CYP3A51P-202ENST00000620220 1704 ntAPPRIS P1 TSL 1 (best) BASIC5.79□□□□□ -1.48
ATG4AQ8WYN0 VCAN-201ENST00000265077 12625 ntAPPRIS P3 TSL 1 (best) BASIC5.79□□□□□ -1.48
ATG4AQ8WYN0 HIF1AN-201ENST00000299163 13011 ntAPPRIS P1 TSL 1 (best) BASIC5.79□□□□□ -1.48
ATG4AQ8WYN0 PSG7-206ENST00000623675 1392 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
ATG4AQ8WYN0 VPS50-202ENST00000305866 3613 ntAPPRIS P1 TSL 1 (best) BASIC5.79□□□□□ -1.48
ATG4AQ8WYN0 FCRL2-203ENST00000368181 1669 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
ATG4AQ8WYN0 PCGF5-201ENST00000336126 7018 ntAPPRIS P1 TSL 1 (best) BASIC5.78□□□□□ -1.48
ATG4AQ8WYN0 MRE11P1-201ENST00000464884 2127 ntBASIC5.78□□□□□ -1.48
ATG4AQ8WYN0 ACE2-201ENST00000252519 3393 ntAPPRIS P1 TSL 1 (best) BASIC5.78□□□□□ -1.48
ATG4AQ8WYN0 RNF32-203ENST00000392741 2260 ntTSL 1 (best) BASIC5.78□□□□□ -1.48
ATG4AQ8WYN0 ZNF418-205ENST00000595830 3543 ntAPPRIS P3 TSL 1 (best) BASIC5.78□□□□□ -1.48
ATG4AQ8WYN0 RYR3-209ENST00000634418 15078 ntAPPRIS ALT2 TSL 5 BASIC5.78□□□□□ -1.48
ATG4AQ8WYN0 EEF1A1P21-201ENST00000512363 1344 ntBASIC5.78□□□□□ -1.48
ATG4AQ8WYN0 PCDH11X-202ENST00000361655 4126 ntAPPRIS ALT2 TSL 1 (best) BASIC5.78□□□□□ -1.48
ATG4AQ8WYN0 CFH-201ENST00000359637 1454 ntTSL 1 (best) BASIC5.78□□□□□ -1.48
ATG4AQ8WYN0 ZNF271P-205ENST00000639248 4573 ntTSL 5 BASIC5.78□□□□□ -1.48
ATG4AQ8WYN0 CYP2C8-210ENST00000535898 1799 ntTSL 2 BASIC5.78□□□□□ -1.48
ATG4AQ8WYN0 AC093909.5-201ENST00000621839 1799 ntBASIC5.78□□□□□ -1.48
ATG4AQ8WYN0 AL355306.2-206ENST00000635233 1903 ntTSL 5 BASIC5.78□□□□□ -1.48
ATG4AQ8WYN0 AC010132.2-201ENST00000295493 1043 ntBASIC5.78□□□□□ -1.48
ATG4AQ8WYN0 DEFB106A-201ENST00000335186 303 ntAPPRIS P1 TSL 1 (best) BASIC5.78□□□□□ -1.48
ATG4AQ8WYN0 DEFB106B-201ENST00000335479 316 ntAPPRIS P1 TSL 1 (best) BASIC5.78□□□□□ -1.48
ATG4AQ8WYN0 SNORA64.1-201ENST00000362600 132 ntBASIC5.78□□□□□ -1.48
ATG4AQ8WYN0 RNU1-65P-201ENST00000363919 148 ntBASIC5.78□□□□□ -1.48
ATG4AQ8WYN0 KRTAP3-1-201ENST00000391588 594 ntAPPRIS P1 BASIC5.78□□□□□ -1.48
ATG4AQ8WYN0 AL391422.1-201ENST00000402155 436 ntBASIC5.78□□□□□ -1.48
ATG4AQ8WYN0 MIR1203-201ENST00000408812 85 ntBASIC5.78□□□□□ -1.48
ATG4AQ8WYN0 GPS2P1-201ENST00000411761 986 ntBASIC5.78□□□□□ -1.48
ATG4AQ8WYN0 ARHGEF3-203ENST00000413728 3992 ntTSL 1 (best) BASIC5.78□□□□□ -1.48
ATG4AQ8WYN0 RNF10P1-201ENST00000418589 369 ntBASIC5.78□□□□□ -1.48
ATG4AQ8WYN0 HAO2-IT1-201ENST00000419144 311 ntTSL 5 BASIC5.78□□□□□ -1.48
ATG4AQ8WYN0 AC005005.2-201ENST00000420779 380 ntBASIC5.78□□□□□ -1.48
ATG4AQ8WYN0 ODF2-AS1-201ENST00000420801 407 ntTSL 3 BASIC5.78□□□□□ -1.48
ATG4AQ8WYN0 RPL7P56-201ENST00000429441 717 ntBASIC5.78□□□□□ -1.48
ATG4AQ8WYN0 RBMX-203ENST00000431446 2004 ntTSL 2 BASIC5.78□□□□□ -1.48
Retrieved 100 of 98,524 protein–RNA pairs in 186 ms