Protein–RNA interactions for Protein: Q8TER0

SNED1, Sushi, nidogen and EGF-like domain-containing protein 1, humanhuman

Predictions only

Length 1,413 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNED1Q8TER0 TBC1D23-201ENST00000344949 3656 ntAPPRIS P1 TSL 1 (best) BASIC6.16□□□□□ -1.42
SNED1Q8TER0 CDK14-206ENST00000436577 4787 ntTSL 2 BASIC6.15□□□□□ -1.42
SNED1Q8TER0 OR4F5-202ENST00000641515 2618 ntAPPRIS P1 BASIC6.15□□□□□ -1.42
SNED1Q8TER0 RNASEL-202ENST00000539397 4046 ntTSL 2 BASIC6.15□□□□□ -1.42
SNED1Q8TER0 DTNA-206ENST00000399121 6490 ntAPPRIS ALT2 TSL 1 (best) BASIC6.15□□□□□ -1.42
SNED1Q8TER0 GHR-210ENST00000615111 4814 ntAPPRIS P1 TSL 5 BASIC6.15□□□□□ -1.42
SNED1Q8TER0 KIAA0408-204ENST00000483725 3284 ntAPPRIS P2 TSL 5 BASIC6.15□□□□□ -1.42
SNED1Q8TER0 AP000808.1-201ENST00000512200 3252 ntTSL 2 BASIC6.15□□□□□ -1.42
SNED1Q8TER0 DECR1-215ENST00000522161 1766 ntAPPRIS ALT2 TSL 2 BASIC6.15□□□□□ -1.42
SNED1Q8TER0 ZC3H12C-201ENST00000278590 8807 ntTSL 2 BASIC6.15□□□□□ -1.42
SNED1Q8TER0 FILIP1-202ENST00000370020 4051 ntTSL 1 (best) BASIC6.15□□□□□ -1.42
SNED1Q8TER0 TRAPPC13-201ENST00000231526 2715 ntAPPRIS ALT1 TSL 5 BASIC6.15□□□□□ -1.42
SNED1Q8TER0 SYCP2L-207ENST00000543878 2436 ntAPPRIS ALT2 TSL 5 BASIC6.15□□□□□ -1.43
SNED1Q8TER0 CDON-202ENST00000392693 9138 ntAPPRIS ALT2 TSL 1 (best) BASIC6.15□□□□□ -1.43
SNED1Q8TER0 FILIP1L-201ENST00000331335 4219 ntAPPRIS P1 TSL 1 (best) BASIC6.15□□□□□ -1.43
SNED1Q8TER0 ZNF658-201ENST00000612867 4160 ntAPPRIS P1 TSL 2 BASIC6.15□□□□□ -1.43
SNED1Q8TER0 LAMA2-201ENST00000421865 9640 ntAPPRIS P2 TSL 5 BASIC6.15□□□□□ -1.43
SNED1Q8TER0 ZNF652P1-201ENST00000442420 1309 ntBASIC6.15□□□□□ -1.43
SNED1Q8TER0 Z95114.1-201ENST00000624264 14574 ntBASIC6.15□□□□□ -1.43
SNED1Q8TER0 CR1-203ENST00000367051 7469 ntTSL 5 BASIC6.15□□□□□ -1.43
SNED1Q8TER0 AC004415.1-201ENST00000422697 449 ntTSL 3 BASIC6.15□□□□□ -1.43
SNED1Q8TER0 C6orf52-203ENST00000426700 493 ntAPPRIS P2 TSL 2 BASIC6.15□□□□□ -1.43
SNED1Q8TER0 RPL23AP1-201ENST00000428990 471 ntBASIC6.15□□□□□ -1.43
SNED1Q8TER0 AC138761.5-201ENST00000433967 325 ntBASIC6.15□□□□□ -1.43
SNED1Q8TER0 AL445644.1-201ENST00000436524 751 ntTSL 2 BASIC6.15□□□□□ -1.43
SNED1Q8TER0 VAV3-AS1-201ENST00000438318 619 ntTSL 2 BASIC6.15□□□□□ -1.43
SNED1Q8TER0 AC023271.1-201ENST00000445936 1090 ntBASIC6.15□□□□□ -1.43
SNED1Q8TER0 AL356859.1-201ENST00000449180 414 ntTSL 5 BASIC6.15□□□□□ -1.43
SNED1Q8TER0 AL031668.1-201ENST00000451556 603 ntTSL 3 BASIC6.15□□□□□ -1.43
SNED1Q8TER0 RPL7AP28-201ENST00000464513 571 ntBASIC6.15□□□□□ -1.43
SNED1Q8TER0 TM4SF1-AS1-202ENST00000496491 754 ntTSL 2 BASIC6.15□□□□□ -1.43
SNED1Q8TER0 AC115622.1-201ENST00000509628 587 ntTSL 3 BASIC6.15□□□□□ -1.43
SNED1Q8TER0 AC096759.1-201ENST00000510744 473 ntTSL 3 BASIC6.15□□□□□ -1.43
SNED1Q8TER0 RERG-AS1-201ENST00000541243 337 ntTSL 2 BASIC6.15□□□□□ -1.43
SNED1Q8TER0 AC069234.2-201ENST00000541383 575 ntTSL 3 BASIC6.15□□□□□ -1.43
SNED1Q8TER0 C15orf41-205ENST00000563167 772 ntTSL 3 BASIC6.15□□□□□ -1.43
SNED1Q8TER0 AC009139.2-201ENST00000569032 566 ntTSL 5 BASIC6.15□□□□□ -1.43
SNED1Q8TER0 PRELID3BP3-201ENST00000584963 545 ntBASIC6.15□□□□□ -1.43
SNED1Q8TER0 AC118757.1-201ENST00000586982 453 ntTSL 2 BASIC6.15□□□□□ -1.43
SNED1Q8TER0 AC007786.3-201ENST00000615154 596 ntBASIC6.15□□□□□ -1.43
SNED1Q8TER0 DICER1-202ENST00000393063 10220 ntAPPRIS P1 TSL 1 (best) BASIC6.15□□□□□ -1.43
SNED1Q8TER0 WDR64-201ENST00000366552 4371 ntAPPRIS P1 TSL 5 BASIC6.15□□□□□ -1.43
SNED1Q8TER0 PTBP3-202ENST00000334318 7990 ntAPPRIS ALT1 TSL 1 (best) BASIC6.15□□□□□ -1.43
SNED1Q8TER0 NF1-201ENST00000356175 12362 ntAPPRIS P3 TSL 1 (best) BASIC6.15□□□□□ -1.43
SNED1Q8TER0 DAZ4-205ENST00000440066 1891 ntTSL 5 BASIC6.15□□□□□ -1.43
SNED1Q8TER0 ZNF143-201ENST00000299606 2562 ntTSL 5 BASIC6.14□□□□□ -1.43
SNED1Q8TER0 DAZ1-205ENST00000540248 3268 ntTSL 5 BASIC6.14□□□□□ -1.43
SNED1Q8TER0 KIAA1109-201ENST00000264501 15896 ntAPPRIS P1 TSL 5 BASIC6.14□□□□□ -1.43
SNED1Q8TER0 LARS-201ENST00000274562 2213 ntTSL 2 BASIC6.14□□□□□ -1.43
SNED1Q8TER0 TRAT1-202ENST00000426646 1596 ntTSL 1 (best) BASIC6.14□□□□□ -1.43
SNED1Q8TER0 KARSP3-201ENST00000571212 1504 ntBASIC6.14□□□□□ -1.43
SNED1Q8TER0 ZNF83-202ENST00000536937 2726 ntAPPRIS P1 TSL 2 BASIC6.14□□□□□ -1.43
SNED1Q8TER0 SBNO1-201ENST00000267176 11121 ntAPPRIS P3 TSL 5 BASIC6.14□□□□□ -1.43
SNED1Q8TER0 SLC30A6-201ENST00000282587 5089 ntAPPRIS P1 TSL 1 (best) BASIC6.14□□□□□ -1.43
SNED1Q8TER0 MSL3P1-202ENST00000440028 1468 ntBASIC6.14□□□□□ -1.43
SNED1Q8TER0 GSTM2-206ENST00000442650 1478 ntTSL 5 BASIC6.14□□□□□ -1.43
SNED1Q8TER0 RASGRP1-209ENST00000559830 1910 ntTSL 1 (best) BASIC6.14□□□□□ -1.43
SNED1Q8TER0 RNA5-8SP7-201ENST00000363443 155 ntBASIC6.14□□□□□ -1.43
SNED1Q8TER0 MIR129-1-201ENST00000384972 72 ntBASIC6.14□□□□□ -1.43
SNED1Q8TER0 AL049693.1-201ENST00000402760 611 ntBASIC6.14□□□□□ -1.43
SNED1Q8TER0 AC234779.1-201ENST00000425910 285 ntBASIC6.14□□□□□ -1.43
SNED1Q8TER0 AC090804.1-201ENST00000448870 490 ntBASIC6.14□□□□□ -1.43
SNED1Q8TER0 CEACAMP6-201ENST00000452007 574 ntBASIC6.14□□□□□ -1.43
SNED1Q8TER0 snoU13.1-201ENST00000459157 104 ntBASIC6.14□□□□□ -1.43
SNED1Q8TER0 RPL23AP56-201ENST00000460778 453 ntBASIC6.14□□□□□ -1.43
SNED1Q8TER0 SNHG12-207ENST00000475441 444 ntTSL 3 BASIC6.14□□□□□ -1.43
SNED1Q8TER0 NIP7P2-201ENST00000485801 544 ntBASIC6.14□□□□□ -1.43
SNED1Q8TER0 CXCL11-202ENST00000503860 767 ntAPPRIS P1 TSL 3 BASIC6.14□□□□□ -1.43
SNED1Q8TER0 FGB-207ENST00000509493 1164 ntTSL 5 BASIC6.14□□□□□ -1.43
SNED1Q8TER0 AC068413.1-201ENST00000517739 776 ntTSL 5 BASIC6.14□□□□□ -1.43
SNED1Q8TER0 AC022360.1-201ENST00000521058 340 ntBASIC6.14□□□□□ -1.43
SNED1Q8TER0 SOX5P1-201ENST00000524155 1127 ntBASIC6.14□□□□□ -1.43
SNED1Q8TER0 C11orf74-210ENST00000534635 801 ntAPPRIS ALT2 TSL 2 BASIC6.14□□□□□ -1.43
SNED1Q8TER0 TRDN-205ENST00000546248 1179 ntTSL 1 (best) BASIC6.14□□□□□ -1.43
SNED1Q8TER0 AC016542.2-201ENST00000624201 619 ntBASIC6.14□□□□□ -1.43
SNED1Q8TER0 AC134980.1-203ENST00000640541 570 ntTSL 4 BASIC6.14□□□□□ -1.43
SNED1Q8TER0 RALGAPA1-202ENST00000382366 6328 ntTSL 1 (best) BASIC6.14□□□□□ -1.43
SNED1Q8TER0 MAP3K20-202ENST00000375213 3741 ntAPPRIS P1 TSL 1 (best) BASIC6.14□□□□□ -1.43
SNED1Q8TER0 SELENOI-205ENST00000613142 8126 ntAPPRIS ALT1 TSL 5 BASIC6.14□□□□□ -1.43
SNED1Q8TER0 MUC4-215ENST00000475231 16273 ntAPPRIS ALT2 TSL 5 BASIC6.14□□□□□ -1.43
SNED1Q8TER0 ZNF83-204ENST00000545872 2633 ntAPPRIS P1 TSL 2 BASIC6.14□□□□□ -1.43
SNED1Q8TER0 SEC31A-217ENST00000505984 3596 ntTSL 1 (best) BASIC6.14□□□□□ -1.43
SNED1Q8TER0 DDX3Y-201ENST00000336079 4445 ntAPPRIS P1 TSL 1 (best) BASIC6.14□□□□□ -1.43
SNED1Q8TER0 U2SURP-214ENST00000493598 3491 ntTSL 5 BASIC6.14□□□□□ -1.43
SNED1Q8TER0 ZBTB25-201ENST00000394715 2094 ntAPPRIS P1 TSL 2 BASIC6.14□□□□□ -1.43
SNED1Q8TER0 PLEKHS1-204ENST00000369310 2046 ntAPPRIS ALT2 TSL 1 (best) BASIC6.13□□□□□ -1.43
SNED1Q8TER0 AK3-201ENST00000359883 1536 ntTSL 1 (best) BASIC6.13□□□□□ -1.43
SNED1Q8TER0 MS4A14-203ENST00000395005 2813 ntTSL 1 (best) BASIC6.13□□□□□ -1.43
SNED1Q8TER0 GJA9-202ENST00000360786 1901 ntAPPRIS P1 BASIC6.13□□□□□ -1.43
SNED1Q8TER0 PRDM2-206ENST00000413440 6175 ntTSL 1 (best) BASIC6.13□□□□□ -1.43
SNED1Q8TER0 FPGT-208ENST00000534056 1426 ntTSL 2 BASIC6.13□□□□□ -1.43
SNED1Q8TER0 AC073342.2-201ENST00000595842 1800 ntBASIC6.13□□□□□ -1.43
SNED1Q8TER0 RNF217-201ENST00000359704 1784 ntTSL 1 (best) BASIC6.13□□□□□ -1.43
SNED1Q8TER0 RNF217-202ENST00000368414 1771 ntTSL 2 BASIC6.13□□□□□ -1.43
SNED1Q8TER0 MTUS1-228ENST00000544260 3650 ntTSL 2 BASIC6.13□□□□□ -1.43
SNED1Q8TER0 UPF2-201ENST00000356352 5569 ntAPPRIS P1 TSL 1 (best) BASIC6.13□□□□□ -1.43
SNED1Q8TER0 PDS5B-201ENST00000315596 7497 ntAPPRIS P1 TSL 1 (best) BASIC6.13□□□□□ -1.43
SNED1Q8TER0 HYALP1-201ENST00000417674 1279 ntBASIC6.13□□□□□ -1.43
SNED1Q8TER0 AL355994.1-201ENST00000424379 260 ntBASIC6.13□□□□□ -1.43
SNED1Q8TER0 AC012519.1-201ENST00000424588 610 ntBASIC6.13□□□□□ -1.43
Retrieved 100 of 98,524 protein–RNA pairs in 98.8 ms